Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F13
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                            113   1e-25
10_07_0174 + 13815478-13815903                                        113   2e-25
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950     28   8.5  
06_03_1119 + 27760412-27760527,27760851-27761010,27761283-277614...    28   8.5  

>03_01_0066 - 537729-538163
          Length = 144

 Score =  113 bits (273), Expect = 1e-25
 Identities = 49/74 (66%), Positives = 65/74 (87%)
 Frame = +3

Query: 99  MGRVRTKTVKXAAKXIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 278
           MGRVRTKTVK  ++ +IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR
Sbjct: 1   MGRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRR 60

Query: 279 LRHSQVRGISIKLQ 320
           ++   VRGIS+KLQ
Sbjct: 61  IQRGPVRGISLKLQ 74


>10_07_0174 + 13815478-13815903
          Length = 141

 Score =  113 bits (272), Expect = 2e-25
 Identities = 49/74 (66%), Positives = 64/74 (86%)
 Frame = +3

Query: 99  MGRVRTKTVKXAAKXIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 278
           MGRVRTKTVK  ++ +IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR
Sbjct: 1   MGRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRR 60

Query: 279 LRHSQVRGISIKLQ 320
           ++   VRGIS+KLQ
Sbjct: 61  IQRGPVRGISLKLQ 74


>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
          Length = 346

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 251 WICHTFNEASQTLASARNLYQTSGKRSVRGVT 346
           WI H +  A+  LA+A N Y+ S     R V+
Sbjct: 132 WIMHEYRLAADPLAAAANTYKPSSSSRFRNVS 163


>06_03_1119 +
           27760412-27760527,27760851-27761010,27761283-27761449,
           27761525-27761629,27762097-27762864,27762942-27763131,
           27763763-27763940,27764106-27764497
          Length = 691

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 349 YVPEVSALEHDIIEVDPEHQGYVED 423
           Y  E   L +D+I++DP H+ Y ED
Sbjct: 469 YCEESLGLFNDLIDLDPSHKRYYED 493


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,591,869
Number of Sequences: 37544
Number of extensions: 203001
Number of successful extensions: 511
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)