Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F13
         (869 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   139   1e-34

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  139 bits (336), Expect = 1e-34
 Identities = 65/74 (87%), Positives = 70/74 (94%)
 Frame = +3

Query: 99  MGRVRTKTVKXAAKXIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 278
           MGRVRTKT+K A+K IIEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+R
Sbjct: 1   MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKR 60

Query: 279 LRHSQVRGISIKLQ 320
           LRHSQVRGISIKLQ
Sbjct: 61  LRHSQVRGISIKLQ 74



 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +1

Query: 343 DNYVPEVSALEHDIIEVDPE 402
           DNYVP+VSALE DIIEVDPE
Sbjct: 82  DNYVPDVSALEQDIIEVDPE 101



 Score = 32.7 bits (71), Expect = 0.015
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +2

Query: 398 PNTKDMLKMLDFNNINGLQLTQP 466
           P TK+MLK LDFNNI  +QLT P
Sbjct: 100 PETKEMLKHLDFNNI-VVQLTNP 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,011
Number of Sequences: 2352
Number of extensions: 7534
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)