Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F12
         (954 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.48 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.9  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   5.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   5.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   7.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.48
 Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
 Frame = +3

Query: 399 GXXXGXXGXGX--GGGXXGGXXNPGGXGXXXXRXGAXSPXAGXRXAGPPGXXGGXXSXPX 572
           G   G  G G   GGG   G   PGG G    R          R  G  G  GG      
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQLD 260

Query: 573 GGG 581
           G G
Sbjct: 261 GRG 263



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +2

Query: 389 GXXGGSXXXXRXGXGGGGXGXAXKPGGXGG 478
           G  GG       G GGG  G     GG GG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 953 GPAPXGGGAXXXXPGCXXXGXXGG 882
           G AP GGG     PG    G  GG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 1/67 (1%)
 Frame = -3

Query: 595 GVPRXPPPXGXXXXPPXXXXXXXXXXXXXGEXAPXRXXXXPXPPGFXXPP-XXPPPXPXP 419
           G P  PPP G     P                 P        P GF   P   PPP P P
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLPPPLNLLRAP-FFPLNPAQLRFPAGFPNLPNAQPPPAPPP 587

Query: 418 XXPXXXP 398
             P   P
Sbjct: 588 PPPMGPP 594



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 475 PXPPGFXXPPXXPPPXPXPXXPXXXP 398
           P PP    PP  PPP P    P   P
Sbjct: 583 PAPP--PPPPMGPPPSPLAGGPLGGP 606


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +2

Query: 386 AGXXGGSXXXXRXGXGGGGXGXAXKPGGXGGXXXAXGGXL 505
           +G  GG         G GG G +   GG G    + GG +
Sbjct: 652 SGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGM 691


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = -3

Query: 463 GFXXPPXXPPPXPXPXXPXXXP 398
           G   PP  PPP P    P   P
Sbjct: 779 GIGSPPPPPPPPPSSLSPGGVP 800


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = +2

Query: 398 GGSXXXXRXGXGGGGXGXAXKPGGXGGXXXAXGG 499
           GG     R G GGG      + G  GG     GG
Sbjct: 65  GGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 397  GGXXXXXAAGGXGGGXGXG 453
            GG     A GG GGG G G
Sbjct: 1487 GGSPTKGAGGGGGGGGGKG 1505


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +2

Query: 389 GXXGGSXXXXRXGXGGGGXGXAXKPGGXGG 478
           G  GG       G  GG  G +   GG GG
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGGGSGG 867


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 397 GGXXXXXAAGGXGGGXGXG 453
           GG      AGG GGG G G
Sbjct: 191 GGTNGCTKAGGGGGGTGTG 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,510
Number of Sequences: 2352
Number of extensions: 8729
Number of successful extensions: 56
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)