Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F10
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    32   0.61 
AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AC024790-3|AAF60637.1|  446|Caenorhabditis elegans Hypothetical ...    29   5.7  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 607 YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 729
           Y+  R+F +E    ALL +   +P+TC   +  E W FL A
Sbjct: 71  YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111


>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/73 (23%), Positives = 30/73 (41%)
 Frame = -1

Query: 828 YRIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQES 649
           +R RR     +    H  AW+ R  P    ++ +  K  ++ K E + G     G+E+  
Sbjct: 81  FRYRRMVFGAKDQLKHDKAWNNRSLPQKSRWNQASVKLAQYQKAEEKMGFIKVFGTEEFQ 140

Query: 648 ARGSFQGETPGIF 610
                +G+T   F
Sbjct: 141 NYSKRRGQTRNSF 153


>Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical
           protein F32A7.5c protein.
          Length = 877

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/59 (37%), Positives = 28/59 (47%)
 Frame = -2

Query: 857 FTRXXFKTIVTG*GAAVGLNGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQV 681
           FT     +IVT  G+    +G   H AQ G  D H+ EIP    M+ R +S  E G  V
Sbjct: 650 FTSALASSIVTSNGSETNGHGEQAHAAQNGGID-HQKEIPKHDLMQSR-SSVIENGAAV 706


>Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical
           protein F32A7.5b protein.
          Length = 764

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/59 (37%), Positives = 28/59 (47%)
 Frame = -2

Query: 857 FTRXXFKTIVTG*GAAVGLNGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQV 681
           FT     +IVT  G+    +G   H AQ G  D H+ EIP    M+ R +S  E G  V
Sbjct: 522 FTSALASSIVTSNGSETNGHGEQAHAAQNGGID-HQKEIPKHDLMQSR-SSVIENGAAV 578


>Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical
           protein F32A7.5a protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/59 (37%), Positives = 28/59 (47%)
 Frame = -2

Query: 857 FTRXXFKTIVTG*GAAVGLNGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQV 681
           FT     +IVT  G+    +G   H AQ G  D H+ EIP    M+ R +S  E G  V
Sbjct: 650 FTSALASSIVTSNGSETNGHGEQAHAAQNGGID-HQKEIPKHDLMQSR-SSVIENGAAV 706


>AC024790-3|AAF60637.1|  446|Caenorhabditis elegans Hypothetical
           protein Y47D7A.6 protein.
          Length = 446

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = +1

Query: 787 TNPPFSPTAAPYPVTIVLXS----XRVKPTY 867
           T PP  PTA  YPV +   S      VKPTY
Sbjct: 27  TPPPLYPTAKKYPVALTYKSSPAESEVKPTY 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,345,584
Number of Sequences: 27780
Number of extensions: 421191
Number of successful extensions: 1095
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)