BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_F09
(875 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 27 0.99
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 2.3
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 25 3.0
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 25 3.0
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 7.0
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 7.0
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 24 7.0
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 26.6 bits (56), Expect = 0.99
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 734 GGXGXXGGFGKXGGGXFXXXGGGGXSEKRR 823
G G GG G GGG GGG S RR
Sbjct: 850 GSSGGAGG-GSSGGGGSGGTSGGGSSTTRR 878
Score = 23.8 bits (49), Expect = 7.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 752 GGFGKXGGGXFXXXGGGG 805
GG G GGG GGGG
Sbjct: 293 GGVGGGGGGGGGGGGGGG 310
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.4 bits (53), Expect = 2.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 737 GXGXXGGFGKXGGGXFXXXGGGGXSEKR 820
G G GG G GG GGGG R
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGGRDR 235
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 25.0 bits (52), Expect = 3.0
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 734 GGXGXXGGFGKXGGGXFXXXGG-GGXSEKRR 823
GG G GG G GGG GG G RR
Sbjct: 556 GGGGGGGGGGGVGGGIGLSLGGAAGVDGSRR 586
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 25.0 bits (52), Expect = 3.0
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 734 GGXGXXGGFGKXGGGXFXXXGG-GGXSEKRR 823
GG G GG G GGG GG G RR
Sbjct: 557 GGGGGGGGGGGVGGGIGLSLGGAAGVDGSRR 587
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.8 bits (49), Expect = 7.0
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 855 FFPXXIXXPCXRRFSEXPPPPXXXKXPPPXLPKPPXXPXP 736
FFP P RF P + PP P PP P P
Sbjct: 559 FFPLN---PAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPP 595
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.8 bits (49), Expect = 7.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 752 GGFGKXGGGXFXXXGGGG 805
GG G GGG GGGG
Sbjct: 293 GGVGGGGGGGGGGGGGGG 310
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.8 bits (49), Expect = 7.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 752 GGFGKXGGGXFXXXGGGG 805
GG G GGG GGGG
Sbjct: 245 GGVGGGGGGGGGGGGGGG 262
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,908
Number of Sequences: 2352
Number of extensions: 10191
Number of successful extensions: 42
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -