Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_F08
(916 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.005
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.019
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.057
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.13
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.23
SPAC1952.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 29 0.92
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 4.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +1
Query: 655 PPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKK---XPPXXPP 816
PPP PP P PP PPPPP P P + PP PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 33.5 bits (73), Expect = 0.043
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +1
Query: 658 PPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRXTPPP 834
PP PP P PP P PP P P P PP P PPP
Sbjct: 424 PPSAPPSLPP---SAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP-AAPPLPPAAPAPPP 478
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Frame = +1
Query: 655 PPPKXPPXXXPXXKGP----PPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRX 822
PPP PP K P + PPPPP P + PP PPR
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG--RSAPPPPPPRS 368
Query: 823 TP 828
P
Sbjct: 369 AP 370
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/62 (27%), Positives = 18/62 (29%), Gaps = 2/62 (3%)
Frame = +1
Query: 655 PPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRXTP-- 828
PPP PPP + P P P P PP PP P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 829 PP 834
PP
Sbjct: 436 PP 437
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPP--XTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPP 816
P PP + P P PPP T PP P P P PP PP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP-VSMNPAINSTSKPPLPPP 295
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRX 822
P P P PP P PP P P P P PP P
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP-AAPPLPPSAP 454
Query: 823 TPPP 834
PP
Sbjct: 455 IAPP 458
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/60 (28%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXG--XXPPXXXXXPXXFPKKXPPXXPP 816
P PP P PP P + PP P G PP P P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/76 (26%), Positives = 23/76 (30%), Gaps = 11/76 (14%)
Frame = +1
Query: 622 GXXXGXXPXEXPPPKX--------PPXXXPXXKGPPP---PXTXKXPPPPPXGXXPPXXX 768
G P PPP+ PP PPP P T + PPP
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
Query: 769 XXPXXFPKKXPPXXPP 816
P P + P PP
Sbjct: 390 APPPAIPGRSAPALPP 405
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/53 (28%), Positives = 15/53 (28%), Gaps = 2/53 (3%)
Frame = +1
Query: 661 PKXPPXXXPXXKGP--PPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXP 813
P PP P P PP PP P P P PP P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Frame = +1
Query: 658 PPKXPPXXXPXXK-GPP--PPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRXTP 828
PP PP P G P PP P PP P P P P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +1
Query: 634 GXXPXEXPPPKXPPXXXPXXKGPP-PPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXX 810
G P P PP P PP P PP PP PP P P
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 811 PPRXTP 828
PP TP
Sbjct: 1217 PPVPTP 1222
Score = 34.7 bits (76), Expect = 0.019
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 5/69 (7%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPP-PPXTXKXPP-PPPXGXXP---PXXXXXPXXFPKKXPPX 807
P P PP P PP P + PP P P G P P P P PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 808 XPPRXTPPP 834
P PP
Sbjct: 1143 PKPSVAAPP 1151
Score = 34.7 bits (76), Expect = 0.019
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPP-PPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPR 819
P PP + PP P PP PP + P P P PP P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Query: 820 XTPP 831
+ P
Sbjct: 1249 VSTP 1252
Score = 33.9 bits (74), Expect = 0.032
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 5/69 (7%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPP-----XGXXPPXXXXXPXXFPKKXPPX 807
P P PP P PP P PP P PP P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 808 XPPRXTPPP 834
PP T PP
Sbjct: 1210 VPPPSTAPP 1218
Score = 32.7 bits (71), Expect = 0.075
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRX 822
P P PP P PP P PP P P P P PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP-----PVPAPSGAPPVPKPSV 1166
Query: 823 TPPP 834
PP
Sbjct: 1167 AAPP 1170
Score = 32.3 bits (70), Expect = 0.099
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = +1
Query: 634 GXXPXEXPPPKXPPXXXPXXKGPPPPXTXKXPP-PPPXGXXP----PXXXXXPXXFPKKX 798
G P P PP P P P + PP P P P P P P +
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 799 PPXXPPRXTPPP 834
PP P PP
Sbjct: 1198 PPVPKPSVGVPP 1209
Score = 32.3 bits (70), Expect = 0.099
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +1
Query: 634 GXXPXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXP 813
G P P PP P P P + PP PP PP P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 814 PRXTPP 831
P P
Sbjct: 1237 PPVPAP 1242
Score = 31.9 bits (69), Expect = 0.13
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPP-PPPXGXXP----PXXXXXPXXFPKKXPPX 807
P P PP P PP P PP P P P P P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 808 XPPRXTPPPXXK 843
PP PP K
Sbjct: 1191 VPPPSEAPPVPK 1202
Score = 29.1 bits (62), Expect = 0.92
Identities = 20/70 (28%), Positives = 20/70 (28%), Gaps = 7/70 (10%)
Frame = +1
Query: 643 PXEXPPPKXPPXXX---PXXKGPPPPXTXKXPPPPPXGXXP----PXXXXXPXXFPKKXP 801
P PP PP P P P P P P P P P P
Sbjct: 982 PTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 802 PXXPPRXTPP 831
P P TPP
Sbjct: 1042 PVPIPTSTPP 1051
Score = 29.1 bits (62), Expect = 0.92
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +1
Query: 664 KXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRXTPP 831
K PP P PP P PP P PP P PP P P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGA-PSAPPPVPAPSSEIP 1074
Score = 29.1 bits (62), Expect = 0.92
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Frame = +1
Query: 634 GXXPXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXP----PXXXXXPXXFPKK-X 798
G P P PP P P P + PP P P P P P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI 1178
Query: 799 PPXXPPRXTPPP 834
PP P PP
Sbjct: 1179 PPVPKPAAGVPP 1190
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 6/70 (8%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPP-PXTXKXPP-PPPXGXXP----PXXXXXPXXFPKKXPP 804
P P P P G PP P PP P P P P P P PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 805 XXPPRXTPPP 834
P PP
Sbjct: 1123 VPKPSVAAPP 1132
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 658 PPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRXTPP 831
P PP P PP P + P P P P PP P PP
Sbjct: 1037 PSTAPPVPIPTST-PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/70 (25%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXX---PXXFPKKXPPXXP 813
P PP P P K + P P P P P P PP
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 814 PRXTPPPXXK 843
P PP K
Sbjct: 1097 PSVAAPPVPK 1106
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 5/63 (7%)
Frame = +1
Query: 658 PPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXP----PXXXXXPXXFPK-KXPPXXPPRX 822
P PP P + P P PP P P P P P PP P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 823 TPP 831
PP
Sbjct: 1120 APP 1122
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.019
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +1
Query: 661 PKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRXTP 828
P P P PP PPPP PP P P PP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 32.7 bits (71), Expect = 0.075
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRX 822
P PP + P P PP PPPP PP P P P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA--PPMPAGPPSAPPPPLPASSAPSV 1743
Query: 823 TPP 831
P
Sbjct: 1744 PNP 1746
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.057
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 655 PPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPP 816
PPP P P P P PPP P PP P PP PP
Sbjct: 732 PPPPPPAVIVPT----PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 721 KXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRXTPPP 834
K PPPPP P P P P P PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPP 741
P PPP P P PPP PPPPP
Sbjct: 748 PIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 30.3 bits (65), Expect = 0.40
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRX 822
P PP P P PPP PPPP PP P PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP----PP-----PPGVAGAGPPPPPP-- 780
Query: 823 TPPP 834
PPP
Sbjct: 781 -PPP 783
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 531 VXGXTPPXPPPPXPPXXGG 475
V G PP PPPP P G
Sbjct: 770 VAGAGPPPPPPPPPAVSAG 788
Score = 24.2 bits (50), Expect(2) = 0.97
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 537 AXVXGXTPPXPPPP 496
A + G PP PPPP
Sbjct: 755 APIMGGPPPPPPPP 768
Score = 23.0 bits (47), Expect(2) = 0.97
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 516 PPXPPPPXPPXXGG 475
PP PPPP GG
Sbjct: 776 PPPPPPPPAVSAGG 789
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 18/82 (21%)
Frame = +1
Query: 643 PXEXPPPK------XPPXXXPXXKGPPPPXTXKXPP-----PP-PXGXXPPXXXXXPXXF 786
P P P PP P PPP PP PP P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 787 PKKXP------PXXPPRXTPPP 834
P P P PP+ PPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/66 (27%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXX--PPXXXXXPXXFPKKXPPXXPP 816
P PP P P PP + PP P PP P P P PP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 817 RXTPPP 834
+ P
Sbjct: 205 PLSQAP 210
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPP 711
P PPP PP P + PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPP 735
P PPP PP PPPP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP-----PPP 30
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 635 AXXPXXXPPQXXPPNXXPXPRGPPPXXXKKXPPPP 739
A P PP PP P PPP PPPP
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPP------PPPP 30
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 709 PXTXKXPPPPPXGXXPPXXXXXP 777
P PPPPP G PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 644 PXXXPPQXXPPNXXPXPRGPPPXXXKK 724
P PP PP+ P P PPP KK
Sbjct: 11 PPPPPPGFEPPSQPPPP--PPPGYVKK 35
>SPAC1952.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 158
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 635 AXXPXXXPPQXXPPNXXPXPRGPPPXXXKKXPPP 736
A P Q PN P P PPP + PPP
Sbjct: 86 AFFPGSSSQQTDIPNVRPQPHIPPPRKSDEAPPP 119
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 537 AXVXGXTPPXPPPPXP 490
A V PP PPPP P
Sbjct: 938 AGVMPAFPPPPPPPPP 953
Score = 23.0 bits (47), Expect(2) = 1.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 516 PPXPPPPXPPXXGG 475
PP PPPP GG
Sbjct: 947 PPPPPPPLVSAAGG 960
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 661 PKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPP 759
P+ PP P P P PPPPP PP
Sbjct: 221 PEIPPTYTPKQADPLP-----APPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 700 PPPPXTXKXPPPPP 741
PPPP T PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
Score = 23.0 bits (47), Expect(2) = 2.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 516 PPXPPPPXP 490
PP PPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 23.0 bits (47), Expect(2) = 2.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 513 PXPPPPXPP 487
P PPPP PP
Sbjct: 236 PAPPPPPPP 244
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +1
Query: 643 PXEXPPPKXPPXXXPXXKGPPPPXTXKXPPPPPXGXXPPXXXXXPXXFPKKXPPXXPPRX 822
P PP P P G P + P PP PP +P P
Sbjct: 495 PTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGA 554
Query: 823 TPPP 834
T PP
Sbjct: 555 TAPP 558
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 6.5
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = -2
Query: 891 GAPPXXXGGGXXXGVFFXXGGGXXPXXXXXXXXXGEXXRVXXXPXGXXPXXGGGGXFXCX 712
G PP GG G F GG G P G GG G
Sbjct: 198 GGPPPGPGGFGGFGGF----GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 711 XGGGPLGXGXXXGG 670
GGGP G G GG
Sbjct: 254 FGGGPGGFGGGPGG 267
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,589,093
Number of Sequences: 5004
Number of extensions: 20871
Number of successful extensions: 368
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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