Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F07
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0194 + 13645418-13645790,13645879-13647653                       33   0.38 
11_06_0655 - 25923171-25923185,25923208-25923432,25923865-259243...    28   8.2  

>01_03_0194 + 13645418-13645790,13645879-13647653
          Length = 715

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -2

Query: 470 DKYKCLFQGYGCILNICMCIIKILHLFPLSGTCNTSSLRT 351
           DKY  LF G  C+ N   C++    L P+ G  NTSS+ T
Sbjct: 79  DKYYNLFHGLECVDNRAFCLLLWAALLPMVG-MNTSSILT 117


>11_06_0655 -
           25923171-25923185,25923208-25923432,25923865-25924324,
           25924330-25924985
          Length = 451

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
 Frame = +2

Query: 449 GKDIY-------IYHTKIFPWAGFEPATTLCSDHVPYHYTRRPL 559
           G+DIY       + H ++FP  G     T CS  VP   T RP+
Sbjct: 102 GRDIYDGGCLLDVQHVQMFPGDGATATHTTCSTMVPSSATARPV 145


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,204,149
Number of Sequences: 37544
Number of extensions: 315839
Number of successful extensions: 523
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)