Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_F06
(904 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0115 - 19888252-19888406,19888507-19888573,19888867-198891... 115 6e-26
12_01_0377 - 2939384-2939505,2939629-2939695,2940324-2940543,294... 109 3e-24
04_03_0888 - 20559435-20559565,20559674-20559740,20560217-205604... 108 5e-24
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 89 3e-18
06_01_0978 + 7595641-7595843,7595952-7596072,7596176-7596253,759... 64 1e-10
02_05_0690 - 30943184-30943305,30944048-30944459,30944549-309446... 41 0.001
10_08_0158 - 15298902-15299111,15300557-15300655,15301375-153014... 35 0.10
03_01_0367 + 2852287-2852603,2853202-2853278,2853388-2853431,285... 33 0.41
01_06_0255 - 27918447-27918534,27918615-27918685,27919131-279192... 29 5.1
02_05_0667 + 30739612-30739783,30739872-30739957,30740832-307408... 28 8.8
02_05_0356 + 28252154-28252897,28253171-28253377,28253473-282537... 28 8.8
>02_04_0115 -
19888252-19888406,19888507-19888573,19888867-19889101,
19889179-19889255,19889350-19889415,19889517-19889565,
19889651-19889701,19889799-19889851,19889973-19890024,
19890126-19890214,19890308-19890393,19890603-19890659,
19890742-19890919,19891852-19891908,19892209-19892439
Length = 500
Score = 115 bits (276), Expect = 6e-26
Identities = 64/166 (38%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
RY+ SLGLLT KF++LL++A DG+LDL A L V QKRRIYDITNVLEGIGLIEK K
Sbjct: 169 RYDSSLGLLTKKFINLLKQAPDGILDLNNAAETLEV-QKRRIYDITNVLEGIGLIEKTLK 227
Query: 350 NSIQWRGAGPDYDKNEIGKKVMGLRKQLSYXXXXXXXXXXXXQWIKQSTKNVLDEPDNQD 529
N I+W+G D E+ + L+ ++ +++ + + ++ +NQ
Sbjct: 228 NRIRWKGL--DDSGVELDNGLSALQAEVENLSLKEQALDERISDMREKLRGLTEDENNQR 285
Query: 530 MCFVMDTEIQ--QCFQNDLVLVLEAPLGANLSIGTQPNKDRESNFL 661
+V + +I+ CFQN+ ++ ++AP G L + P+ D ++L
Sbjct: 286 WLYVTEDDIKGLPCFQNETLIAIKAPHGTTLEV---PDPDEAGDYL 328
>12_01_0377 -
2939384-2939505,2939629-2939695,2940324-2940543,
2940655-2940731,2940813-2940878,2940970-2941018,
2941131-2941181,2941262-2941314,2941432-2941486,
2941563-2941651,2941742-2941827,2941933-2941989,
2942086-2942275,2943847-2944005
Length = 446
Score = 109 bits (262), Expect = 3e-24
Identities = 61/165 (36%), Positives = 95/165 (57%), Gaps = 2/165 (1%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
RY+ SLGLLT KF++LL+ A G++DL A L V QKRRIYDITNVLEGIGLIEK+ K
Sbjct: 130 RYDSSLGLLTKKFLNLLKGAPGGIVDLNNAAETLEV-QKRRIYDITNVLEGIGLIEKKLK 188
Query: 350 NSIQWRGAGPDYDKNEIGKKVMGLRKQLSYXXXXXXXXXXXXQWIKQSTKNVLDEPDNQD 529
N+I+W+G D E+ + L+ + ++ + + ++ +NQ
Sbjct: 189 NNIRWKGI-DDSRPGEVSDDMSILQADIEALSLQEHSVDQQISEMRDKLRGLTEDENNQK 247
Query: 530 MCFVMDTEIQQ--CFQNDLVLVLEAPLGANLSIGTQPNKDRESNF 658
+V + +I+ CFQN ++ ++AP G L + P+ D +++
Sbjct: 248 WLYVTEDDIKSLPCFQNQTLIAIKAPHGTTLEV---PDPDEVNDY 289
>04_03_0888 -
20559435-20559565,20559674-20559740,20560217-20560477,
20560783-20560848,20560971-20561019,20561441-20561491,
20561568-20561620,20561743-20561794,20561867-20561955,
20562044-20562135,20562298-20562351,20563411-20563462,
20563775-20563963
Length = 401
Score = 108 bits (260), Expect = 5e-24
Identities = 57/154 (37%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVR-QKRRIYDITNVLEGIGLIEKRS 346
RY+ SLGLLT KF++LL++ +DG+LDL A +L V +KRRIYDITNVLEG GLIEK+
Sbjct: 93 RYDNSLGLLTRKFINLLKQTQDGILDLNDAAKILDVWVRKRRIYDITNVLEGTGLIEKKL 152
Query: 347 KNSIQWRGAGPDYDKNEIGKKVMGLRKQLSYXXXXXXXXXXXXQWIKQSTKNVLDEPDNQ 526
KN I+WRG+ D + + L+ ++ I++ + + ++ N
Sbjct: 153 KNRIRWRGS--DDSGTNLDSDISCLKTEVENLYIQEQALDRSISEIREKMEELTEDESNH 210
Query: 527 DMCFVMDTEIQ--QCFQNDLVLVLEAPLGANLSI 622
FV + +I+ CFQN+ ++ ++ P G + +
Sbjct: 211 RWLFVTEDDIKGLPCFQNEALIAIKGPRGTTVEV 244
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 89.4 bits (212), Expect = 3e-18
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
RY+ SLGLLT KF++LL+ A+DG LDL A L V QKRRIYDITNVLEG+ LIEK K
Sbjct: 193 RYDSSLGLLTKKFINLLEGAEDGTLDLNKAAETLEV-QKRRIYDITNVLEGVDLIEKTLK 251
Query: 350 NSIQWRG 370
N I+W+G
Sbjct: 252 NMIRWKG 258
>06_01_0978 +
7595641-7595843,7595952-7596072,7596176-7596253,
7596371-7596436,7596556-7596688,7596774-7596841,
7596930-7597002,7597097-7597158,7597240-7597633,
7597768-7597832
Length = 420
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = +2
Query: 164 YKRYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKR 343
Y R +KSLGLL T FV+L + + L A L V ++RRIYDI NVLE IG++ +R
Sbjct: 55 YSRKQKSLGLLCTNFVALYDREDVESVGLDDAARRLGV-ERRRIYDIVNVLESIGMLVRR 113
Query: 344 SKNSIQWRGAG 376
+KN W G G
Sbjct: 114 AKNRYTWIGFG 124
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDL-KIATNLLA-------VRQK-RRIYDITNVLEG 322
R EKSLGLLT FV L + + L + A LL +R K RR+YDI NVL
Sbjct: 203 RKEKSLGLLTQNFVKLFLTMEIETISLDEAAKRLLGEGHAANNMRTKVRRLYDIANVLSS 262
Query: 323 IGLIEK 340
+ LIEK
Sbjct: 263 LNLIEK 268
>02_05_0690 -
30943184-30943305,30944048-30944459,30944549-30944610,
30944724-30944787,30944880-30944947,30945039-30945168,
30945276-30945341,30945794-30946369
Length = 499
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLL-----AVRQK-RRIYDITNVLEGIGL 331
R EKSLGLLT FV L + + L A LL A K RR+YDI NVL +
Sbjct: 260 RKEKSLGLLTQNFVKLFLTMEVDTISLDEAAKLLLGEGHAENTKVRRLYDIANVLSSLNF 319
Query: 332 IEK 340
I+K
Sbjct: 320 IDK 322
Score = 32.7 bits (71), Expect = 0.41
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 200 TKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGL 331
+ FV+L + + L A L V ++RRIYDI NVLE +G+
Sbjct: 93 SSFVALYNRDDVESIGLDDAARRLGV-ERRRIYDIVNVLESVGV 135
>10_08_0158 -
15298902-15299111,15300557-15300655,15301375-15301443,
15301535-15301681,15301762-15301839,15302221-15302264,
15302521-15302603,15303394-15303620
Length = 318
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 284 KRRIYDITNVLEGIGLIEKRSKNSIQWRGAGPD--YDKNEIGKKVMGLRKQL 433
+RR+YD NVL + +I K K IQW+G D E+ +++GL+ ++
Sbjct: 153 RRRVYDALNVLMAMDIISK-DKKEIQWKGLPRTSMSDVEELKTEIIGLKGRI 203
>03_01_0367 +
2852287-2852603,2853202-2853278,2853388-2853431,
2854294-2854440,2854528-2854596,2854770-2854868,
2855155-2855193
Length = 263
Score = 32.7 bits (71), Expect = 0.41
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 284 KRRIYDITNVLEGIGLIEKRSKNSIQWRGAGPD--YDKNEIGKKVMGLRKQL 433
+RR+YD NVL + +I K K IQW+G D ++ +++GL+ ++
Sbjct: 155 RRRVYDALNVLMAMEIISK-DKKEIQWKGLPRTSINDIEDLQTELVGLKSRI 205
>01_06_0255 -
27918447-27918534,27918615-27918685,27919131-27919226,
27919335-27919403,27919489-27919629,27919708-27919761,
27920183-27920236,27920343-27920386,27921012-27921117,
27921197-27921258,27921358-27921679
Length = 368
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 284 KRRIYDITNVLEGIGLIEKRSKNSIQWRG 370
+RR+YD NVL I +I K K I+W G
Sbjct: 221 RRRVYDAFNVLIAIRVIAK-DKKEIKWMG 248
>02_05_0667 +
30739612-30739783,30739872-30739957,30740832-30740837,
30741521-30741586,30741664-30741834,30742032-30742202,
30742457-30742612,30742705-30742851,30742964-30743035,
30743122-30743652,30743739-30743926,30744781-30744838
Length = 607
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 645 LSLFGCVPIDKFAPNGASKTKTRSF*KHCWISVSMTKHISWLSGSSKTF 499
LSL G + K +PNG ++ SF +S S + I G+S++F
Sbjct: 387 LSLGGADNMSKISPNGMLARRSPSFNSRSSLSTSSSLVIKHAKGTSRSF 435
>02_05_0356 +
28252154-28252897,28253171-28253377,28253473-28253710,
28254853-28255220
Length = 518
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -3
Query: 482 STVIAYLIIFHVHPNSLIVFLIPLPFYQFHFYHNRD---LLLSIECY--FYFVFQSNQFP 318
+T ++ +HVH + + F IPL + +L + CY F +F++ ++P
Sbjct: 354 ATTCGFMFGWHVHEKASLHFTIPLALIAMDSLEDAKHYFVLSIVSCYSLFPLLFENQEYP 413
Query: 317 LK 312
+K
Sbjct: 414 IK 415
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,527,473
Number of Sequences: 37544
Number of extensions: 339245
Number of successful extensions: 714
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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