Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_F06
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY028166-1|AAK19022.1| 342|Caenorhabditis elegans EFL-1 protein. 102 4e-22
AL031627-9|CAA20948.1| 342|Caenorhabditis elegans Hypothetical ... 102 4e-22
AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein. 65 6e-11
AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical... 65 6e-11
AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical... 65 6e-11
AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical... 65 6e-11
AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical... 65 6e-11
Z66520-10|CAA91391.2| 600|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical pr... 30 2.0
AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein. 30 2.0
>AY028166-1|AAK19022.1| 342|Caenorhabditis elegans EFL-1 protein.
Length = 342
Score = 102 bits (244), Expect = 4e-22
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 11/162 (6%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
R +KSLGLL +F+ ++Q + G DL A L VRQKRRIYDITNVLEGIGLIEKRSK
Sbjct: 65 RADKSLGLLAKRFIRMIQYSPYGRCDLNTAAEALNVRQKRRIYDITNVLEGIGLIEKRSK 124
Query: 350 NSIQWRGAGPDYDKN-EIGK----------KVMGLRKQLSYXXXXXXXXXXXXQWIKQST 496
N IQW+G D+ N + GK ++ L+ ++ +W++QS
Sbjct: 125 NMIQWKGG--DFMLNVKEGKRQSATTEEEDRMEQLKAEIEQLNKEEELIEQRQRWLQQSL 182
Query: 497 KNVLDEPDNQDMCFVMDTEIQQCFQNDLVLVLEAPLGANLSI 622
+N+ + +N + +V+ +++ + +DL + ++ +G + +
Sbjct: 183 RNMTESVENNKLSYVLRSQLAEIQGSDLTIGIQTRVGTQVRL 224
>AL031627-9|CAA20948.1| 342|Caenorhabditis elegans Hypothetical
protein Y102A5C.18 protein.
Length = 342
Score = 102 bits (244), Expect = 4e-22
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 11/162 (6%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
R +KSLGLL +F+ ++Q + G DL A L VRQKRRIYDITNVLEGIGLIEKRSK
Sbjct: 65 RADKSLGLLAKRFIRMIQYSPYGRCDLNTAAEALNVRQKRRIYDITNVLEGIGLIEKRSK 124
Query: 350 NSIQWRGAGPDYDKN-EIGK----------KVMGLRKQLSYXXXXXXXXXXXXQWIKQST 496
N IQW+G D+ N + GK ++ L+ ++ +W++QS
Sbjct: 125 NMIQWKGG--DFMLNVKEGKRQSATTEEEDRMEQLKAEIEQLNKEEELIEQRQRWLQQSL 182
Query: 497 KNVLDEPDNQDMCFVMDTEIQQCFQNDLVLVLEAPLGANLSI 622
+N+ + +N + +V+ +++ + +DL + ++ +G + +
Sbjct: 183 RNMTESVENNKLSYVLRSQLAEIQGSDLTIGIQTRVGTQVRL 224
>AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein.
Length = 287
Score = 65.3 bits (152), Expect = 6e-11
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 39 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 95
Query: 350 NSIQWRGAGPD-YDKNEIGKKVMGLRKQ 430
N+I+W G + ++N + +V LR+Q
Sbjct: 96 NNIRWIGDNNNSEEQNALEARVEMLRQQ 123
>AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical
protein Y48C3A.17d protein.
Length = 358
Score = 65.3 bits (152), Expect = 6e-11
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 36 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 92
Query: 350 NSIQWRGAGPD-YDKNEIGKKVMGLRKQ 430
N+I+W G + ++N + +V LR+Q
Sbjct: 93 NNIRWIGDNNNSEEQNALEARVEMLRQQ 120
>AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical
protein Y48C3A.17c protein.
Length = 332
Score = 65.3 bits (152), Expect = 6e-11
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 36 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 92
Query: 350 NSIQWRGAGPD-YDKNEIGKKVMGLRKQ 430
N+I+W G + ++N + +V LR+Q
Sbjct: 93 NNIRWIGDNNNSEEQNALEARVEMLRQQ 120
>AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical
protein Y48C3A.17b protein.
Length = 284
Score = 65.3 bits (152), Expect = 6e-11
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 36 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 92
Query: 350 NSIQWRGAGPD-YDKNEIGKKVMGLRKQ 430
N+I+W G + ++N + +V LR+Q
Sbjct: 93 NNIRWIGDNNNSEEQNALEARVEMLRQQ 120
>AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical
protein Y48C3A.17a protein.
Length = 412
Score = 65.3 bits (152), Expect = 6e-11
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 349
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 36 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 92
Query: 350 NSIQWRGAGPD-YDKNEIGKKVMGLRKQ 430
N+I+W G + ++N + +V LR+Q
Sbjct: 93 NNIRWIGDNNNSEEQNALEARVEMLRQQ 120
>Z66520-10|CAA91391.2| 600|Caenorhabditis elegans Hypothetical
protein F49E12.6 protein.
Length = 600
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +2
Query: 170 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVR---QKRRIYDITNVLEGIGLIEK 340
R EKSLGLL +F+ + + G ++ +A + +KRRIYDI NV+E + ++K
Sbjct: 95 RKEKSLGLLCQRFLIAINEETVGSSTREVHLETVARKMNVEKRRIYDIVNVMEALDAMQK 154
Query: 341 RSKNSIQWRG 370
+K+ QW+G
Sbjct: 155 TNKSYYQWQG 164
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 287 RRIYDITNVLEGIGLIEK 340
RR+YDI NVL +GLI+K
Sbjct: 309 RRLYDIANVLVALGLIKK 326
>Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical
protein T23G7.1 protein.
Length = 598
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 284 KRRIYDITNVLEGIGLIEKRSKNSIQWRG 370
+RR+YD NVL + +I K SK I+W G
Sbjct: 125 RRRVYDALNVLLAMNIITK-SKKDIRWIG 152
>AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein.
Length = 598
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 284 KRRIYDITNVLEGIGLIEKRSKNSIQWRG 370
+RR+YD NVL + +I K SK I+W G
Sbjct: 125 RRRVYDALNVLLAMNIITK-SKKDIRWIG 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,024,356
Number of Sequences: 27780
Number of extensions: 346865
Number of successful extensions: 760
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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