Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F04
         (928 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +3

Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXG 494
           G GGG    GGG      PG GG   G
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +3

Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXG 494
           G G G    GGG G    PG GG   G
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +3

Query: 405 KXXGPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGG 530
           K   PG G    GGG      PG GG   G      G G GG
Sbjct: 196 KEDEPGAGGGGSGGG-----APGGGGGSSGGPGPGGGGGGGG 232


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +3

Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRG 527
           G GGG R   GG G  +  G+G         F G G G
Sbjct: 63  GYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYG 100


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 923 GGGXPXGSYEGXXGGXXXGXRFXGGGN 843
           G G   GS  G  GG   G  + GGG+
Sbjct: 681 GAGGGAGSSGGSGGGLASGSPYGGGGH 707


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 9/64 (14%)
 Frame = -1

Query: 577 PPXGGGI--------PXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXX-RXP 425
           PP GG +        P    +   P  P        P   P  P     P PPP     P
Sbjct: 534 PPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGP 593

Query: 424 PPGP 413
           PP P
Sbjct: 594 PPSP 597


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,709
Number of Sequences: 2352
Number of extensions: 4994
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)