Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_F04
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.004
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.004
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.004
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.008
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.008
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 37 0.024
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 36 0.031
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.054
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.054
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.054
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 34 0.13
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.51
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.67
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.2
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 1.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 3.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 3.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 6.2
AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical ... 29 6.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.2
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 8.2
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/54 (38%), Positives = 24/54 (44%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPG 416
PP GG+P + PP P P P PP PG + PPP PPPG
Sbjct: 745 PPPPGGLP---PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP----PPPG 791
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXP-KKXXXXPXXXPPXPGXWXXP*PPP----XXRXPPPGP 413
PP GG+P P PP P P PP PG P PPP PPP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 6/61 (9%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPG------XWXXP*PPPXXRXPPPG 416
PP G+P P PP P PP PG P PPP PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 415 P 413
P
Sbjct: 773 P 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/54 (38%), Positives = 24/54 (44%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPG 416
PP GG+P + PP P P P PP PG + PPP PPPG
Sbjct: 745 PPPPGGLP---PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP----PPPG 791
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXP-KKXXXXPXXXPPXPGXWXXP*PPP----XXRXPPPGP 413
PP GG+P P PP P P PP PG P PPP PPP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 6/61 (9%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPG------XWXXP*PPPXXRXPPPG 416
PP G+P P PP P PP PG P PPP PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 415 P 413
P
Sbjct: 773 P 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/54 (38%), Positives = 24/54 (44%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPG 416
PP GG+P + PP P P P PP PG + PPP PPPG
Sbjct: 328 PPPPGGLP---PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP----PPPG 374
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXP-KKXXXXPXXXPPXPGXWXXP*PPP----XXRXPPPGP 413
PP GG+P P PP P P PP PG P PPP PPP P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 6/61 (9%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPG------XWXXP*PPPXXRXPPPG 416
PP G+P P PP P PP PG P PPP PPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 415 P 413
P
Sbjct: 356 P 356
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -1
Query: 556 PXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXP-PPG 416
P V P PP P PP G W P PPP R P PPG
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG 312
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPP-RPXPKKXXXXPXXXPPXPGXWXXP*PPP-XXRXPPPGP 413
PP G+ + PP P P P PP PG P PPP PPP P
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = -1
Query: 559 IPXAXXVXPXPPRPXPKKXXXXPXXXPPX-----PGXWXXP*PPPXXRXPPPG 416
+P + P PP P P PP PG P PPP R PPG
Sbjct: 277 MPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG 329
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Frame = -1
Query: 595 LWXTLXPPXGGGIPXAXXVXPXPPRPXPKK--XXXXPXXXPPXPGXWXXP---*PPPXXR 431
+W PP G P + PP P P + PP P P PPP R
Sbjct: 295 MWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
Query: 430 XPPPGPXXF 404
P GP +
Sbjct: 355 YPSAGPGMY 363
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPX-PGXWXXP*PPPXXRXPPPGP 413
PP G P + P PP P + P PP P PPP PP P
Sbjct: 321 PPSRFGPPGMGGMPPPPP-PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -1
Query: 556 PXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXP-PPG 416
P V P PP P PP G W P PPP R P PPG
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG 322
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPP-RPXPKKXXXXPXXXPPXPGXWXXP*PPP-XXRXPPPGP 413
PP G+ + PP P P P PP PG P PPP PPP P
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = -1
Query: 559 IPXAXXVXPXPPRPXPKKXXXXPXXXPPX-----PGXWXXP*PPPXXRXPPPG 416
+P + P PP P P PP PG P PPP R PPG
Sbjct: 287 MPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG 339
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Frame = -1
Query: 595 LWXTLXPPXGGGIPXAXXVXPXPPRPXPKK--XXXXPXXXPPXPGXWXXP---*PPPXXR 431
+W PP G P + PP P P + PP P P PPP R
Sbjct: 305 MWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
Query: 430 XPPPGPXXF 404
P GP +
Sbjct: 365 YPSAGPGMY 373
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPX-PGXWXXP*PPPXXRXPPPGP 413
PP G P + P PP P + P PP P PPP PP P
Sbjct: 331 PPSRFGPPGMGGMPPPPP-PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -1
Query: 541 VXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPG 416
+ P PP P P+ P PP P P PPP PPPG
Sbjct: 560 IPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP----PPPG 597
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 535 PXPPRPXP-KKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P PP P P K+ PP P PPP PPP P
Sbjct: 511 PPPPAPGPHKEQRRSTSKDPPRPA------PPPVSSIPPPPP 546
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 36.3 bits (80), Expect = 0.031
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -1
Query: 556 PXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P + PP P P P PP P P PPP PPP P
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P G G P PP P P PP P P PPP PPP P
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAGSPPPPP 301
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPG 416
PP G P PP P PP P P PPP PP G
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
PP GG P PP P P+ PP G P PP PPP P
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG--GSP-PPAGTGSPPPPP 333
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPP 419
PP G P A P PP P PP P P PP PPP
Sbjct: 241 PPPKGSPPLAGSGSPPPP-PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 535 PXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P PP P PP P P PPP PPP P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPPPPP 276
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = -1
Query: 586 TLXPPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
+L PP GG P PP P K+ P PP PP R P GP
Sbjct: 311 SLPPPQAGGSPPPAGTGSPPPPPRQKR--QAPERSPPTGS--PPTGSPPTGRPPRGGP 364
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 849 PPGKTXPXPXPPXXPLVAPXRXPP 920
PP T P PP AP R PP
Sbjct: 322 PPAGTGSPPPPPRQKRQAPERSPP 345
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 648 PXTXKSPPPRGXXXGPPPWGASXXQXXFQRWXNPAG 755
P T PPP PPP S R P G
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P G G P PP P P PP P P PPP PPP P
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAGSPPPPP 322
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPG 416
PP G P PP P PP P P PPP PP G
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
PP GG P PP P P+ PP G P PP PPP P
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG--GSP-PPAGTGSPPPPP 354
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPP 419
PP G P A P PP P PP P P PP PPP
Sbjct: 262 PPPKGSPPLAGSGSPPPP-PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 535 PXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P PP P PP P P PPP PPP P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPPPPP 297
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = -1
Query: 586 TLXPPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
+L PP GG P PP P K+ P PP PP R P GP
Sbjct: 332 SLPPPQAGGSPPPAGTGSPPPPPRQKR--QAPERSPPTGS--PPTGSPPTGRPPRGGP 385
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 849 PPGKTXPXPXPPXXPLVAPXRXPP 920
PP T P PP AP R PP
Sbjct: 343 PPAGTGSPPPPPRQKRQAPERSPP 366
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 648 PXTXKSPPPRGXXXGPPPWGASXXQXXFQRWXNPAG 755
P T PPP PPP S R P G
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P G G P PP P P PP P P PPP PPP P
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAGSPPPPP 307
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPG 416
PP G P PP P PP P P PPP PP G
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
PP GG P PP P P+ PP G P PP PPP P
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG--GSP-PPAGTGSPPPPP 339
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPP 419
PP G P A P PP P PP P P PP PPP
Sbjct: 247 PPPKGSPPLAGSGSPPPP-PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 535 PXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P PP P PP P P PPP PPP P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPPPPP 282
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = -1
Query: 586 TLXPPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
+L PP GG P PP P K+ P PP PP R P GP
Sbjct: 317 SLPPPQAGGSPPPAGTGSPPPPPRQKR--QAPERSPPTGS--PPTGSPPTGRPPRGGP 370
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 849 PPGKTXPXPXPPXXPLVAPXRXPP 920
PP T P PP AP R PP
Sbjct: 328 PPAGTGSPPPPPRQKRQAPERSPP 351
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 648 PXTXKSPPPRGXXXGPPPWGASXXQXXFQRWXNPAG 755
P T PPP PPP S R P G
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 535 PXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P P P P+ P PP + P PPP R PP P
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQP 130
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 535 PXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P P P P+ P PP + P PPP R PP P
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQP 130
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 535 PXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P P P P+ P PP + P PPP R PP P
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQP 130
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG R GGG G + G GG G G GRGG G
Sbjct: 88 GNGGGGRGGGGGGGGGRGGGGGGRGGGGGG---GGGRGGGG 125
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXX--QXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG GGG G G G W G GRGG G
Sbjct: 56 GRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGG 98
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG GGG G G GG G G GRGG G
Sbjct: 96 GGGGGGGGRGGGGGGRGGGGGGGGGRGGG----GGGRGGGG 132
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 535 PXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P PP P P PP P P PPP + PPP P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPP-----PPPPPTLKAPPPPP 102
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
PP A V PP P P+ P P P P P + PPP P
Sbjct: 82 PPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPP 136
Score = 31.9 bits (69), Expect = 0.67
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXX----PPXPGXWXXP*PPPXXRXPPPGP 413
PP A PP P P+ P PP P P PPP PPP P
Sbjct: 97 PPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAP 155
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -1
Query: 559 IPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
+P V P PP P P + P PP P PPP PPP P
Sbjct: 47 MPMPMPVCPPPP-PCPAQFCPPPPICPPPP-------PPPMPCPPPPPP 87
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G G G GGG G + +GGW G +G G GG G
Sbjct: 226 GYGSGGGWGGGGGGRDR--DRGGWGGGGGGRGYGGGGGGGG 264
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P G IP PP P P P PP P P PPP PPP P
Sbjct: 68 PVPNGFIPPPPGPGGIPP-PPPMFAGGIP---PPPPMMGGIPPPPPMFGAPPPPP 118
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 9/54 (16%)
Frame = -1
Query: 577 PPXGGGIP-----XAXXVXPXPPR----PXPKKXXXXPXXXPPXPGXWXXP*PP 443
PP GGIP A + P PP P P P PP G P PP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG R GGG G G GG+ G + G G GG G
Sbjct: 23 GYGGGGRGGGGG-GYSGGRG-GGYGGGGGGGYGGGGYGGGG 61
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 520 PXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPP 419
P P P PP P P PPP PPP
Sbjct: 243 PPPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPP 276
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG GGG G G GG G G G GG G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCG 125
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG GGG G P G G G G GG G
Sbjct: 58 GCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCG 98
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG GGG G G GG G G G GG G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCG 125
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG GGG G P G G G G GG G
Sbjct: 58 GCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCG 98
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGG 530
G GGG GG G + +GG+ G F G RGG
Sbjct: 337 GRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGG 375
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG GGG G G+GG G G G GG G
Sbjct: 55 GRGGGRGGSGGGRGGGSGGGRGG-SGGAGAGGSGSGSGGWG 94
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = -1
Query: 535 PXPPRPXP-KKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P PP P P P PP P PPP PPP P
Sbjct: 74 PLPPPPLPLSNPPAKPTPPPPPPKPTIR--PPPIPASPPPRP 113
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = -1
Query: 535 PXPPRPXP-KKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P PP P P P PP P PPP PPP P
Sbjct: 296 PLPPPPLPLSNPPAKPTPPPPPPKPTIR--PPPIPASPPPRP 335
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 529 PPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPP 419
PP P P+K PP P PPP R PPP
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPP--RSPPP 157
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -1
Query: 577 PPXGGGIPXAXXVXPXPPRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPP 419
PP P P P P P PP P P PP PPP
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical
protein C28C12.4 protein.
Length = 235
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
GPGG GG G PG G G GRGG G
Sbjct: 164 GPGGRHGGPGGPGGRRMGPGGRGGDSREGPMMGGMGRGGFG 204
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
G GGG GGG G G G G G G GG G
Sbjct: 330 GGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGG 370
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = -1
Query: 535 PXP-PRPXPKKXXXXPXXXPPXPGXWXXP*PPPXXRXPPPGP 413
P P P P P + P PP P PP PPP P
Sbjct: 481 PNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 414 GPGGGXRXXGGG*GXX--QXPGKGGWXXGXXXXFFGXGRGGXG 536
G G G R GG G G+GG+ G F G RGG G
Sbjct: 152 GRGRGGRGRGGDRGGRGSDRGGRGGFGRGGGGGFRGGDRGGFG 194
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 420 GGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRG 527
GG GGG G + +GG+ G F G GRG
Sbjct: 187 GGDRGGFGGGRGGFRGGDRGGFRGGRGGDFGGRGRG 222
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +3
Query: 414 GPGG--GXRXXGGG*GXXQXPG--KGGWXXGXXXXFFGXGRGG 530
G GG G R GGG G G +GG G F G GRGG
Sbjct: 9 GGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGGRGG 51
>AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical
protein R08F11.7 protein.
Length = 773
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +3
Query: 405 KXXGPGGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXGXT 542
K G GGG R GGG G G+ G G G +GG G T
Sbjct: 136 KRQGGGGGGR-GGGGGGRGGDGGRSGEQDGRKKRNSGEQQGGGGRT 180
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 420 GGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
GGG GGG G G GG G G G GG G
Sbjct: 119 GGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCG 157
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 420 GGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXG--RGGXG 536
GGG GGG G G GG+ G + G G +GG G
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGG 92
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +3
Query: 420 GGGXRXXGGG*GXXQXPGKGGWXXGXXXXFFGXGRGGXG 536
GGG GGG G G GG G F G G GG G
Sbjct: 134 GGGYGGMGGGPGGYGMGGYGG-GGGGGGDFGGYGGGGMG 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,052,606
Number of Sequences: 27780
Number of extensions: 149180
Number of successful extensions: 1658
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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