Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_F03
(1373 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.40
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 33 0.40
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 1.2
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 31 2.1
03_01_0515 - 3864796-3865425 31 2.8
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 3.7
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 30 3.7
02_04_0199 - 20861793-20862023,20862588-20862798,20863260-208641... 30 3.7
12_02_0046 + 12830974-12832386 29 6.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 8.6
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 29 8.6
07_03_0600 + 19866757-19867218,19867920-19868429 29 8.6
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 8.6
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714... 29 8.6
02_04_0290 - 21627733-21628353,21628424-21628663,21628874-216292... 29 8.6
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.5 bits (73), Expect = 0.40
Identities = 26/87 (29%), Positives = 28/87 (32%)
Frame = +1
Query: 892 PPPRXXGAXXLXXXPPPXGEXAQXYPRGIPAPPPALXXXAPLSQPSXRRXXXKXPHSXXP 1071
PPP A PPP P+G P PPPA P P + P P
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPA---KGPPPPPPPK--GPSPPPPPPP 370
Query: 1072 GGXLAXPXTQXFXNRIXXPPXAEXGAP 1152
GG P PP A G P
Sbjct: 371 GGKKGGPPPPPPKGGASRPP-AAPGVP 396
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 33.5 bits (73), Expect = 0.40
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +3
Query: 705 PXXPPIXXPXXARGXPXXSRRVRAPXXXLPVXPSXX-VXXPXXPPSXSTLXPPSXGXRLX 881
P P P A P + R P +P PS V P PP+ +T PPS +L
Sbjct: 211 PRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPPQRPPAPATKPPPSFPPQLA 270
Query: 882 XSRAXPPXXRRXSP 923
+ P +P
Sbjct: 271 PTMPPPAHAPAETP 284
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 886 AVPPPRXXGAXXLXXXPPPXGEXAQXYPRGIPAPPP 993
A PPP G + P P G A P G+P PP
Sbjct: 1183 APPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPP 1218
Score = 30.7 bits (66), Expect = 2.8
Identities = 29/107 (27%), Positives = 32/107 (29%), Gaps = 11/107 (10%)
Frame = +1
Query: 886 AVPPPRXXGAXXLXXXPPPXG-------EXAQXYPRGI---PAPPPALXXXAPLSQPSXR 1035
A PPP G PPP G A P GI P PPP P + P
Sbjct: 1108 APPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPA 1167
Query: 1036 RXXXKXPHSXXPGGXLAXPXTQXFXNRIXXPPXAEXG-APPXXXRLP 1173
P GG P + PP APP +P
Sbjct: 1168 GFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVP 1214
Score = 30.3 bits (65), Expect = 3.7
Identities = 25/93 (26%), Positives = 28/93 (30%)
Frame = +1
Query: 877 SPTAVPPPRXXGAXXLXXXPPPXGEXAQXYPRGIPAPPPALXXXAPLSQPSXRRXXXKXP 1056
+P A P P G PPP G G PAPPP P+ P
Sbjct: 1135 APPAPPLPEGIGGVP---PPPPVGGLG-----GPPAPPPPAGFRGGTPPPNAHGGVAPPP 1186
Query: 1057 HSXXPGGXLAXPXTQXFXNRIXXPPXAEXGAPP 1155
G + P T PP G PP
Sbjct: 1187 PPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219
>08_02_1143 + 24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 31.1 bits (67), Expect = 2.1
Identities = 23/70 (32%), Positives = 27/70 (38%)
Frame = +1
Query: 868 VXDSPTAVPPPRXXGAXXLXXXPPPXGEXAQXYPRGIPAPPPALXXXAPLSQPSXRRXXX 1047
V D+ V PPR A L PP + +P P PPP +PS RR
Sbjct: 689 VHDTSRWVAPPRTHAAVELSPPSPPHLRIPRPWPPP-PPPPPRRRAEPTPERPSSRRGRY 747
Query: 1048 KXPHSXXPGG 1077
HS GG
Sbjct: 748 ---HSGAGGG 754
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +1
Query: 877 SPTAVPPPRXXGAXXLXXXPPPXGEXAQXYPRGIPAPPPALXXXAPLSQPS 1029
S T+ PPP G + PPP + P +P PPP P PS
Sbjct: 56 SVTSSPPPPAAGPL-MPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPS 105
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.3 bits (65), Expect = 3.7
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 880 PTAVPPPRXXGAXXLXXXPPPXGEXAQXYPRGIPAPPPALXXXAPLSQP 1026
P A PPP + L PPP + P+ PAPPP P+ P
Sbjct: 1165 PPATPPPPPPLSPSLPPPPPPPPLPSGPPPQ--PAPPPLPIQPPPIPPP 1211
>03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 30.3 bits (65), Expect = 3.7
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 892 PPPRXXGAXXLXXXPPPXGEXAQXYPRGIPA-PPPALXXXAPLSQPSXR 1035
PP G PPP P PA PPP AP +QP R
Sbjct: 188 PPADEDGTSASAGAPPPQAPLPPPAPVPAPAPPPPPAAAPAPAAQPEQR 236
>02_04_0199 -
20861793-20862023,20862588-20862798,20863260-20864142,
20864363-20865608
Length = 856
Score = 30.3 bits (65), Expect = 3.7
Identities = 25/79 (31%), Positives = 29/79 (36%)
Frame = +3
Query: 705 PXXPPIXXPXXARGXPXXSRRVRAPXXXLPVXPSXXVXXPXXPPSXSTLXPPSXGXRLXX 884
P P + A P RRVR P P S P PP+ PP +
Sbjct: 445 PPLPTVAAAAAAGMPPRRRRRVRPPLPPSPPLLSSTTATP--PPT-----PPVGTPKSEA 497
Query: 885 SRAXPPXXRRXSPLXXAAA 941
+ PP RR PL AAA
Sbjct: 498 ADRRPPPARRRLPLVSAAA 516
>12_02_0046 + 12830974-12832386
Length = 470
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +3
Query: 714 PPIXXPXXARGXPXXSRRVRAPXXXLPVXPSXXVXXPXXPPSXSTLXPPSXGXRLXXSRA 893
PP P R P SRRV AP P+ P P P PPS +
Sbjct: 311 PPWCVPPPPRPAPP-SRRVMAPLPPYPMDPFETPPSPHAPRHDPFEPPPSPDPPIQSYAI 369
Query: 894 XPP 902
PP
Sbjct: 370 DPP 372
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 8.6
Identities = 28/102 (27%), Positives = 30/102 (29%), Gaps = 3/102 (2%)
Frame = +1
Query: 877 SPTAVPPPRXXGAXXLXXXPPPXGEX---AQXYPRGIPAPPPALXXXAPLSQPSXRRXXX 1047
SPTA PP PPP G + P P PPP SQP
Sbjct: 538 SPTAAAPPPPP-----PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPP 592
Query: 1048 KXPHSXXPGGXLAXPXTQXFXNRIXXPPXAEXGAPPXXXRLP 1173
P+ P P NR PP P LP
Sbjct: 593 PLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLP 634
>09_04_0618 + 18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 937 PPXGEXAQXYPRGIPAPPPALXXXAPLSQPSXRRXXXKXP 1056
PP G +PR PAPP P PS R P
Sbjct: 419 PPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSFRADRPMGP 458
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.1 bits (62), Expect = 8.6
Identities = 25/96 (26%), Positives = 29/96 (30%), Gaps = 2/96 (2%)
Frame = +1
Query: 892 PPPRXXGAXXLXXXPPPXGEXAQXYPRGIPAPPPALXXXAPLSQPSXRRXXXKXPHSXXP 1071
PPP G PP G P PP P QP ++ PH
Sbjct: 5 PPPTMNGGHHAAPPPPQVS--------GAPPPPHGHYQQQPPPQPYCQQQQPLPPHYYQA 56
Query: 1072 GGXLAXPXTQ--XFXNRIXXPPXAEXGAPPXXXRLP 1173
G A P Q + PP PP +LP
Sbjct: 57 GPPHAPPPQQPPAMWGQPPPPPPQYAPPPPQQFQLP 92
>05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = +2
Query: 848 PXPPIAXSQTXXQPCXPPXXXARFXSXXCRRLXXRXPRXIPAGSPPXXQXSPXXPHSXNR 1027
P PP + T P PP A R+ P +P PP SP
Sbjct: 57 PPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPP 116
Query: 1028 PP 1033
PP
Sbjct: 117 PP 118
>03_02_0786 -
11169820-11170158,11170245-11170433,11171173-11171469,
11171568-11171630,11171884-11171997,11173011-11173091,
11173176-11173307,11174265-11174363,11174453-11174530,
11174641-11174901
Length = 550
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 880 PTAVPPPRXXGAXXLXXXPPPXGEXAQXYPRGIPAPPPAL 999
P A PPP PPP Y RG+P PPP L
Sbjct: 27 PVAPPPPMGP------PPPPPMPPVPVMYLRGVPPPPPWL 60
>02_04_0290 -
21627733-21628353,21628424-21628663,21628874-21629214,
21630934-21631612,21631893-21631962,21632063-21632190
Length = 692
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -1
Query: 974 PRGXXWAXSPXGGGXXXRXXAPXXRGGGTAVGESXTXRW 858
PRG WA + G G P GG G + + RW
Sbjct: 206 PRGVRWAYTGAGAGSGGARGGPAAIRGGGGSGGTASPRW 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,831,375
Number of Sequences: 37544
Number of extensions: 314187
Number of successful extensions: 1098
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4341590196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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