Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_F02
(878 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 373 e-102
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 343 4e-93
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 302 6e-81
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 270 2e-71
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 225 9e-58
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 223 6e-57
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 207 2e-52
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 196 5e-49
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 186 7e-46
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 182 1e-44
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 169 8e-41
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 143 5e-33
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 141 2e-32
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 122 9e-27
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 120 4e-26
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 120 5e-26
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 115 1e-24
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 88 3e-16
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 84 4e-15
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 84 5e-15
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 83 9e-15
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 82 2e-14
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 81 5e-14
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 78 3e-13
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 75 2e-12
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 71 3e-11
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 68 3e-10
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 67 5e-10
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 66 1e-09
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 66 1e-09
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 63 1e-08
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 62 1e-08
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 62 2e-08
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 58 2e-07
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 56 1e-06
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 55 3e-06
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 53 1e-05
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 53 1e-05
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 52 2e-05
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 52 3e-05
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 51 4e-05
UniRef50_Q4T2V3 Cluster: Chromosome undetermined SCAF10170, whol... 37 0.59
UniRef50_Q87BL9 Cluster: DNA helicase; n=5; Xylella fastidiosa|R... 37 0.59
UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2; Nanoar... 36 1.0
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 5.5
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 9.6
UniRef50_A0YI31 Cluster: DNA mismatch repair protein; n=5; Cyano... 33 9.6
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 9.6
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 373 bits (917), Expect = e-102
Identities = 175/237 (73%), Positives = 206/237 (86%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
MAVG+N+G+S GGKKG K+++VDPFTRK WY VKAP+MF QVG TLVNRTQGTKIAS+
Sbjct: 1 MAVGKNKGVSKGGKKGSKKKVVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASD 60
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
GLKG VFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKW
Sbjct: 61 GLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKW 120
Query: 445 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 624
QTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM II R++T
Sbjct: 121 QTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREIT 180
Query: 625 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELHGE 795
+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLKK RF++S LMELHG+
Sbjct: 181 STDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 237
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 343 bits (843), Expect = 4e-93
Identities = 164/237 (69%), Positives = 196/237 (82%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
MAVG+N+ L+ GGKKG K+++VDPF++K WY VKAP+MF+ +G TLV RTQGTKIAS+
Sbjct: 1 MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASD 60
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
GLKG VFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKW
Sbjct: 61 GLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKW 117
Query: 445 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 624
QT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V
Sbjct: 118 QTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQ 177
Query: 625 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELHGE 795
++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKK +FE+ KLMELHGE
Sbjct: 178 TNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape)
Length = 656
Score = 302 bits (742), Expect = 6e-81
Identities = 147/237 (62%), Positives = 185/237 (78%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
MAVG+N+ +S G KKG K++ DPF +K WY +KAPS+F VG TLV+RTQGTKIASE
Sbjct: 396 MAVGKNKRISKG-KKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASE 454
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
GLK VFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR +V+KW
Sbjct: 455 GLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKW 512
Query: 445 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 624
QTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM EI+T T
Sbjct: 513 QTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMAT 572
Query: 625 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELHGE 795
+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK +F++ KLME+HG+
Sbjct: 573 SCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGD 629
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 270 bits (663), Expect = 2e-71
Identities = 132/248 (53%), Positives = 180/248 (72%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
MAVG+N+ LS G KKG+K++ DPF RK WY +KAP+ F+ VG TLVNR+ G K A++
Sbjct: 1 MAVGKNKRLSKG-KKGLKKKTQDPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNAND 59
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
LKG +FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR +V+KW
Sbjct: 60 ALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKW 117
Query: 445 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 624
Q+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII R+ +
Sbjct: 118 QSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAS 177
Query: 625 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELHGEXXW 804
L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+ +F++ L+ LHGE
Sbjct: 178 TCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGESTT 237
Query: 805 XQGGXRXQ 828
+ G + +
Sbjct: 238 DEQGQKVE 245
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 225 bits (551), Expect = 9e-58
Identities = 125/242 (51%), Positives = 166/242 (68%), Gaps = 18/242 (7%)
Frame = +1
Query: 118 GGKKGVKQQLVDPFTRKAWYXVKAPSMFSKX----QVGTTLVNRTQGTKIASEGLKGXVF 285
G KKG K+ VDPFTRK WY V+AP+ F K +VG T VNRTQGTK+AS+GLKG V+
Sbjct: 8 GSKKGGKK--VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
Query: 286 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEAN 465
EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE
Sbjct: 66 EVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECF 123
Query: 466 IDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREV 645
+DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM +I+T V++++L+ V
Sbjct: 124 VDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTV 183
Query: 646 VNKLI--------------PDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLME 783
V+ LI ++A+ I I+P+ +V IRKVKVLK + + +KL E
Sbjct: 184 VDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSE 243
Query: 784 LH 789
L+
Sbjct: 244 LY 245
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 223 bits (544), Expect = 6e-57
Identities = 109/239 (45%), Positives = 157/239 (65%), Gaps = 4/239 (1%)
Frame = +1
Query: 85 MAVGQNQGL-SXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIAS 261
M G+N GL + GGKKG K++ +DP +RK WY +AP FS G TLV ++ G +IAS
Sbjct: 1 MTQGKNPGLKAGGGKKGAKKRTIDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIAS 60
Query: 262 EGLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 441
E +KG V E +LADL+ D ++++RK +L+ + V GRN +F+G+D+T D+L M++K
Sbjct: 61 EEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRK 119
Query: 442 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQVRAIRKKMCEIIT 612
WQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +QVRAIR+K+ IT
Sbjct: 120 WQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFIT 179
Query: 613 RDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELH 789
+ + E LI + K IEK I+PL+++ IRKVKVLK+ + + +K+ EL+
Sbjct: 180 NEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 207 bits (506), Expect = 2e-52
Identities = 92/236 (38%), Positives = 153/236 (64%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
MA+G+N+ +S GGK+G + + + RK WY V AP+ F K Q T+ N+TQGT+IA++
Sbjct: 1 MALGKNKRISKGGKRGKRGKAQETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAAD 60
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
L+G VFE +LADL E ++RK R + VQGRN+L FH M++TTDK+ +++KW
Sbjct: 61 VLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKW 120
Query: 445 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 624
T +E ++VKT DGY +R+F + FT + Q + CYA+ V+ +R ++ ++I R ++
Sbjct: 121 CTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLS 180
Query: 625 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELHG 792
+++E V+ L + ++ + + C+ I PLR++ IRKV+V++ +F+ L+ HG
Sbjct: 181 KVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHG 236
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 196 bits (479), Expect = 5e-49
Identities = 96/237 (40%), Positives = 154/237 (64%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
M G+N+ L G KKG K+ +DP RK W+ + AP F+ G T +N++ GT +A+E
Sbjct: 1 MTQGKNKKL--GKKKGQKKT-IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATE 57
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
+KG V E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+ M+KK
Sbjct: 58 AIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKR 116
Query: 445 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 624
QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ EI+ ++V+
Sbjct: 117 QTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVS 176
Query: 625 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELHGE 795
+ +++ +S+AK+I KA I+PL+++ +RKVK++K+ + + KL E + +
Sbjct: 177 KKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVDAQKLREFYDD 233
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 186 bits (453), Expect = 7e-46
Identities = 94/201 (46%), Positives = 133/201 (66%), Gaps = 1/201 (0%)
Frame = +1
Query: 85 MAVGQNQGLSXGG-KKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIAS 261
MA G+N+ G KKG K+++ +PF++K WY VK P F + VG +VN+T GT+IAS
Sbjct: 1 MATGKNKKYKAGNVKKGSKRKIAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIAS 60
Query: 262 EGLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 441
E LKG V EV+LADL + KF+ E V G++ L FHG+ LTTDKLR +VKK
Sbjct: 61 EQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLRSIVKK 118
Query: 442 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 621
W TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ IRK M +IT++
Sbjct: 119 WCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEA 178
Query: 622 TNSELREVVNKLIPDSIAKDI 684
+ EL + V+ L + K +
Sbjct: 179 ASRELTQFVDYLKKTNFQKKL 199
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 182 bits (443), Expect = 1e-44
Identities = 102/221 (46%), Positives = 141/221 (63%), Gaps = 1/221 (0%)
Frame = +1
Query: 130 GVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQ 309
G +++ +K Y VKA +MF+ +G T V R Q TK+ S GL G VFE SLA LQ
Sbjct: 1 GARRKTARRAKKKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQ 60
Query: 310 ADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDG 489
D RKF+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D
Sbjct: 61 NDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADY 116
Query: 490 YVLRVFCIGFT-NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPD 666
Y+L +FC+G+T N + R+ AQ+ QV I +I+ D ++L+EV+NKL+PD
Sbjct: 117 YLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPD 174
Query: 667 SIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELH 789
++ KD+EKAC IYPL DV +RKVK+L+K + ++ KL ELH
Sbjct: 175 NVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELH 215
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 169 bits (411), Expect = 8e-41
Identities = 80/154 (51%), Positives = 106/154 (68%)
Frame = +1
Query: 334 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 513
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 514 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 693
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 694 CHGIYPLRDVCIRKVKVLKKXRFEISKLMELHGE 795
I+PL +RKVKVLKK + ++ +++ELH E
Sbjct: 126 ASSIFPLSGALVRKVKVLKKPKLDLGRILELHSE 159
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 143 bits (347), Expect = 5e-33
Identities = 79/235 (33%), Positives = 126/235 (53%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
MA+G N+ G KK +++ DP+ +K WY V AP+ F +G T V +T G ++A++
Sbjct: 1 MAIGGNK---TGKKKITQRKNPDPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATD 57
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
+ V+EV+L DL + KF L + V L NFHGMD+T K + +K
Sbjct: 58 VINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKG 117
Query: 445 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 624
I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +R + E + ++
Sbjct: 118 CDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELG 177
Query: 625 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELH 789
+ +V KL + + +A I RDV IR+VKV+K+ R + L +H
Sbjct: 178 KVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 141 bits (341), Expect = 2e-32
Identities = 74/134 (55%), Positives = 96/134 (71%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
M V +N+ L+ GGKKG K+++VDPF++K WY V AP+MF+ +G TLV RTQGTKIAS+
Sbjct: 1 MVVDKNKRLTKGGKKGAKKKVVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD 60
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
G VFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+DLT+DK+ ++K
Sbjct: 61 ---GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKK 114
Query: 445 QTLIEANIDVKTTD 486
I +V+T D
Sbjct: 115 MMEIMTR-EVQTND 127
Score = 112 bits (270), Expect = 1e-23
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = +1
Query: 583 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRF 762
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LKK +F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 763 EISKLMELHGE 795
E+ KLMELHGE
Sbjct: 171 ELGKLMELHGE 181
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 122 bits (295), Expect = 9e-27
Identities = 62/111 (55%), Positives = 78/111 (70%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
MA +N+ L KKG K++ VD ++K WY +KAP+MF+ +G TLV RTQGTKIAS+
Sbjct: 1 MAGSKNEHLPRSSKKGAKKKAVDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASD 60
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 417
GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M L+ D
Sbjct: 61 GLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 120 bits (290), Expect = 4e-26
Identities = 69/222 (31%), Positives = 120/222 (54%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
M++ +N+ LS K K Q V+ +R+ V AP +F +G TL+ + +
Sbjct: 1 MSINKNKNLS--SIKNKKNQDVN--SRQELIKVYAPDIFDSKLIGKTLIKKRNPAD-ENS 55
Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
+ +++VSLAD+ E S F + + FHG+ LT DK+ ++KKW
Sbjct: 56 SVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKW 113
Query: 445 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 624
TLIE ++ KT DGY L++F I + K + KT Y +Q RA+R+++ +II ++
Sbjct: 114 HTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGI 173
Query: 625 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 750
N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 174 NMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 120 bits (289), Expect = 5e-26
Identities = 59/159 (37%), Positives = 97/159 (61%)
Frame = +1
Query: 274 GXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 453
G ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 454 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 633
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 634 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 750
+++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 115 bits (277), Expect = 1e-24
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 1/209 (0%)
Frame = +1
Query: 127 KGVKQQLVDPFTRKAWYXVKAPSMFS-KXQVGTTLVNRTQGTKIASEGLKGXVFEVSLAD 303
K +KQ D F +K W V P+ F+ K +G T+ N+ ++ + + V+E+S AD
Sbjct: 13 KKIKQ---DSFIKKEWRHVLVPAYFTGKRDIGVTVSNKCARGRVPMDYVNNRVWELSHAD 69
Query: 304 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 483
+ D +R IA G V F GM LT DKL +++K++T+I+A++D KT
Sbjct: 70 MVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTA 126
Query: 484 DGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP 663
DG++LR+F IGFT K + S + YA + R +R M + +T + + ++ +
Sbjct: 127 DGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVD 186
Query: 664 DSIAKDIEKACHGIYPLRDVCIRKVKVLK 750
+ I +I + C I + V I KVKV+K
Sbjct: 187 EKIENEIVEKCKQICQIESVYITKVKVIK 215
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 87.8 bits (208), Expect = 3e-16
Identities = 64/209 (30%), Positives = 104/209 (49%)
Frame = +1
Query: 148 VDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAE 327
VD F K WY V AP+ F++ +G TL + G I G V E +L D+ D +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWTKQ 61
Query: 328 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 507
FR+ E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV
Sbjct: 62 NIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVK 119
Query: 508 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 687
I T K A+ +Q+ +IR+ M ++ + E +N+++ +A +I
Sbjct: 120 PIVLTVK---------RARTSQIESIRQIMINVVNKRGAELGFTEFINEVVTGKVASEIY 170
Query: 688 KACHGIYPLRDVCIRKVKVLKKXRFEISK 774
K IYPLR V I K +++ + +K
Sbjct: 171 KNTKNIYPLRRVEIGKSELVYRPAVAAAK 199
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 84.2 bits (199), Expect = 4e-15
Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 4/205 (1%)
Frame = +1
Query: 151 DPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAER 330
D + K WY + AP MF +VG T + E + G V E +L D+ D
Sbjct: 4 DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56
Query: 331 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 510
FR+ V+G F G L D +R +V++ + I+ IDV T DGY +RV
Sbjct: 57 IKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAG 114
Query: 511 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAK 678
+ FT T A+ +Q RAIRK+M ++I + + E + + + +SI +
Sbjct: 115 LAFT---------TRRAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPE 165
Query: 679 DIEKACHGIYPLRDVCIRKVKVLKK 753
I++A IYP+R IRK +VL++
Sbjct: 166 QIKEAGRKIYPIRQAEIRKTEVLEE 190
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 83.8 bits (198), Expect = 5e-15
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +1
Query: 649 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELHGE 795
NKLIPDSI KDIEKAC IYPL DV +RKVK+LKK +FE+ KLMELHG+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGD 49
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 83.0 bits (196), Expect = 9e-15
Identities = 61/202 (30%), Positives = 103/202 (50%)
Frame = +1
Query: 139 QQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADT 318
Q+ +D + K WY ++AP+ ++ VGTT+ L G E ++ +L
Sbjct: 7 QRKLDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGELT--N 57
Query: 319 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 498
D ++ K L V G + G +LTTD +R +VK+ + I+AN+DV+T DG+V+
Sbjct: 58 DMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVI 117
Query: 499 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 678
RV FT K A+ +Q++AIR+ M +I+ + + ++ + + I ++
Sbjct: 118 RVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSA 168
Query: 679 DIEKACHGIYPLRDVCIRKVKV 744
I + IYPLR V IRK +V
Sbjct: 169 AIYRQAKFIYPLRRVEIRKTQV 190
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 82.2 bits (194), Expect = 2e-14
Identities = 64/220 (29%), Positives = 104/220 (47%)
Frame = +1
Query: 127 KGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADL 306
+ +++ D + K WY + P FS ++G T + K+ G V E +L DL
Sbjct: 7 RAASRKVRDKWRSKVWYTIITPETFSSKEIGMTPADDPD--KVI-----GRVAESTLYDL 59
Query: 307 QADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 486
+ F++ VQG N F G D+TTD +R M+++ ++ I+ +V+T+D
Sbjct: 60 SGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSD 117
Query: 487 GYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPD 666
GY +RV + ++ S KT IRKK+ E +T E V +I D
Sbjct: 118 GYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMTFSEYVKYIISD 168
Query: 667 SIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMEL 786
+++ K IYP+R + IRK +VL F K++EL
Sbjct: 169 DAPRELSKELKVIYPVRRIEIRKSEVL---HFPEEKIVEL 205
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 80.6 bits (190), Expect = 5e-14
Identities = 60/200 (30%), Positives = 96/200 (48%)
Frame = +1
Query: 151 DPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAER 330
DP+ K W+ V APS + N Q K+ L EVSL D+ D
Sbjct: 20 DPWALKKWFSVYAPSYLGGVFLAEVPANEAQ--KLLMRTL-----EVSLYDITKDISHLP 72
Query: 331 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 510
KF++ V+G L F G++LT D +R +V+K + + A +VKT DG V+R+
Sbjct: 73 IKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAV 130
Query: 511 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 690
+G T + +K+ A+RKKM E + + + + + +++ ++A D+
Sbjct: 131 LGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFI 181
Query: 691 ACHGIYPLRDVCIRKVKVLK 750
I P+R V I K+KVLK
Sbjct: 182 VAKKIAPMRKVEIAKIKVLK 201
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 78.2 bits (184), Expect = 3e-13
Identities = 57/199 (28%), Positives = 96/199 (48%)
Frame = +1
Query: 151 DPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAER 330
D +T K W+ + AP F ++G T + +K+ G E +LA+L D +
Sbjct: 12 DKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVV-----GRTVETTLAELTNDYSNQN 64
Query: 331 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 510
+++K V G N F +LT + L + ++ + IE +DV T DGY LRV
Sbjct: 65 TYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKS 124
Query: 511 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 690
+ FT + + KT +Q RAIR M +I+ ++ + + + + + +I K
Sbjct: 125 VVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYK 175
Query: 691 ACHGIYPLRDVCIRKVKVL 747
IYP+R V IRK+++L
Sbjct: 176 NAKKIYPIRRVEIRKIELL 194
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 74.9 bits (176), Expect = 2e-12
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Frame = +1
Query: 133 VKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQA 312
V+ + D + K W+ V AP +F + +GTT + + L G V E +L D+
Sbjct: 2 VRGGIRDTWRLKKWFKVVAPPLFGETVLGTTPADDP-------DKLIGRVMETTLFDITG 54
Query: 313 DTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 492
D F+++ V+G F G +L D +R + ++ + + +V T DGY
Sbjct: 55 DYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGY 112
Query: 493 VLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI---- 660
LRV + FT R+ C + +Q AIRK M EI+ + S L E++ ++
Sbjct: 113 GLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDH 163
Query: 661 PDSIAKDIEKACHGIYPLRDVCIRKVKVL 747
S+A I+++ IYPLR V I K K+L
Sbjct: 164 EGSLAYLIDESARKIYPLRKVEIAKSKLL 192
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 71.3 bits (167), Expect = 3e-11
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 4/213 (1%)
Frame = +1
Query: 121 GKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTL---VNRTQGTKIASEGLKGXVFEV 291
G KG L D + K W+ + +P +F + +G+T V++T G K+ E
Sbjct: 6 GAKGSAGALKDKWKMKKWFSIYSPKVFGEVSLGSTPAFDVSQTMGRKV----------ET 55
Query: 292 SLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 471
+L DL D F+++ +G + F G +L+ D +R +V++ + I +D
Sbjct: 56 TLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVD 113
Query: 472 VKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNSELREVV 648
+ T DG+ LRV + T Y H Q IRK M +++ + E V
Sbjct: 114 ITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGKTFDEFV 163
Query: 649 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 747
++I ++A +I I PLR I K KVL
Sbjct: 164 QEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVL 196
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 68.1 bits (159), Expect = 3e-10
Identities = 53/199 (26%), Positives = 96/199 (48%)
Frame = +1
Query: 151 DPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAER 330
D ++ K W V AP F +G L+ + K G EVS D+ D
Sbjct: 9 DKWSMKKWIKVLAPKAFGFANLG--LIPADEPEKAL-----GRTVEVSFYDITKDVSQLH 61
Query: 331 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 510
KF+++ V L M++T D +R +V++ + ++A +DV+T DG +RV
Sbjct: 62 IKLKFQIVK--VDDGIALTQLKLMEMTRDYIRSLVRRGTSRVDAILDVQTKDGVKMRVMA 119
Query: 511 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 690
+ T +S+ KT +Q +AIR+ M +II+ + + + + + ++A +++
Sbjct: 120 LAVT----VSRIKT-----SQKKAIRRIMFDIISEKAASLDFDTFIQQAVIGTMATEMQM 170
Query: 691 ACHGIYPLRDVCIRKVKVL 747
IYP++ V + K+KVL
Sbjct: 171 QAKKIYPIKKVEVYKIKVL 189
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 67.3 bits (157), Expect = 5e-10
Identities = 52/192 (27%), Positives = 87/192 (45%)
Frame = +1
Query: 163 RKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAERSFRK 342
+K WY V AP F + ++G TL + + G +L +L D+ A +
Sbjct: 12 QKRWYSVLAPEQFDRQELGETLAEEP-------DQVVGRTITTTLGELTGDSGANNTKLT 64
Query: 343 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 522
F++ V F +LT D LR +V++ + +EA+I V TTD Y +RV + T
Sbjct: 65 FKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT 122
Query: 523 NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHG 702
K A +Q +AIR+ M + + + V+ ++ +++ I
Sbjct: 123 TKK---------ADRSQEKAIRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKL 173
Query: 703 IYPLRDVCIRKV 738
IYPLR V I+K+
Sbjct: 174 IYPLRRVEIQKL 185
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 65.7 bits (153), Expect = 1e-09
Identities = 53/205 (25%), Positives = 90/205 (43%)
Frame = +1
Query: 136 KQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQAD 315
K+ D + K WY + P F +G T N L G + E+SL DL +
Sbjct: 12 KRVAKDTWKSKVWYDIYTPQSFGGDVIGQTPANDPAN-------LIGRISEISLRDLTNE 64
Query: 316 TDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 495
+ F++ + V G N F G D T + L+ V++ ++ I A ++V+T DG+
Sbjct: 65 HSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFK 122
Query: 496 LRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIA 675
+RV + T + KT IR +M +II + E V+ ++ +
Sbjct: 123 VRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKETPFAEFVHAMLMGGLG 173
Query: 676 KDIEKACHGIYPLRDVCIRKVKVLK 750
I C ++PL+ V I K +V++
Sbjct: 174 SKIYGDCKKMFPLKRVEIFKSEVIE 198
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 65.7 bits (153), Expect = 1e-09
Identities = 48/191 (25%), Positives = 86/191 (45%)
Frame = +1
Query: 163 RKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAERSFRK 342
+K WY V+AP F + +G T + + G E +L +L D +
Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64
Query: 343 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 522
F++ V + F +LT D LR +V++ + +EA I V TTD Y +++ + T
Sbjct: 65 FKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT 122
Query: 523 NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHG 702
K A +Q +AIR+ M +++ + ++++ ++ ++ I
Sbjct: 123 TKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKD 173
Query: 703 IYPLRDVCIRK 735
IYPLR V I+K
Sbjct: 174 IYPLRRVEIKK 184
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 62.9 bits (146), Expect = 1e-08
Identities = 50/208 (24%), Positives = 94/208 (45%)
Frame = +1
Query: 124 KKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLAD 303
K ++++ D + K+WY +K P F ++G T + L G EV++ +
Sbjct: 3 KAKARRRVRDTWKEKSWYTIKTPVNFEDKEIGETPARDP-------DYLIGRGVEVTMRE 55
Query: 304 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 483
L D + + K R + V G F G TTD +R M+++ + I+A+ VKT
Sbjct: 56 LSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTK 113
Query: 484 DGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP 663
D +++ + T T A+ +Q + +R+ + +++ E++ ++
Sbjct: 114 DDRKVKLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVN 164
Query: 664 DSIAKDIEKACHGIYPLRDVCIRKVKVL 747
+A ++ IYPL+ V I K KVL
Sbjct: 165 GKLASEVYHNAKKIYPLKRVEIIKSKVL 192
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 62.5 bits (145), Expect = 1e-08
Identities = 54/207 (26%), Positives = 92/207 (44%)
Frame = +1
Query: 124 KKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLAD 303
KK + V+ + K+W+ V P K +G T+ + E +KG + + +L +
Sbjct: 3 KKKQAGRRVEGWKAKSWFKVYTPDNLGKAYIGDTIASEV-------ETVKGRIMQATLGE 55
Query: 304 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 483
+ D + F+ IAE V G F G ++T D LR +VK+ + I+ ++ V T
Sbjct: 56 ITNDYAKQHIKMSFK-IAE-VTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTK 113
Query: 484 DGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP 663
D +R+ ++S A Q A+R + + +L +VN ++
Sbjct: 114 DNKKVRL---------TISCYTFARANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVS 164
Query: 664 DSIAKDIEKACHGIYPLRDVCIRKVKV 744
I+KD+ K +YP R V I K KV
Sbjct: 165 GEISKDLFKLVKTLYPTRRVEIIKSKV 191
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 61.7 bits (143), Expect = 2e-08
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
Frame = +1
Query: 151 DPFTRKAWYXVKAPSM-FSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAE 327
D + K WY ++AP ++ +G T+ + E + G ++E++ + D
Sbjct: 21 DKWKTKRWYTIRAPRHPWNYQNIGETIGE-------SDEHIIGRIYEMTQQEFNGDFTKM 73
Query: 328 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 507
+FR ++E V G++ L F G T+ +R +++++ I+ IDV T DGY++R+
Sbjct: 74 HVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIK 131
Query: 508 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 687
+ T K Q + ++IR K +++ V + + ++ S+ +I+
Sbjct: 132 PLIITQK---------RVQTSVKQSIRAKTRDVLLGYVAKTTYDALQVAMLDGSLETEIQ 182
Query: 688 KACHGIYPLRDVCIRKVKVLKK--XRFEISKLMELHGE 795
IYP R V IRK ++L++ E L E+H E
Sbjct: 183 NQIKTIYPCRSVVIRKSQLLQEGVKMEEGPTLDEIHAE 220
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 58.4 bits (135), Expect = 2e-07
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 1/205 (0%)
Frame = +1
Query: 124 KKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLAD 303
KK + V+ + K WY V AP K +G + + E + G V VSL +
Sbjct: 4 KKQSGGRKVEGWKAKNWYKVHAPEFLGKQFIGEIISSNP-------ENVPGRVLTVSLGE 56
Query: 304 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 483
L D + F+++ V G F+G ++T + +R MVKK + +++ I V
Sbjct: 57 LIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPL 114
Query: 484 DG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI 660
L+V FT +A+ +QV+ +R KM +++ ++ V+ ++
Sbjct: 115 GSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDSAKEADFESFVSAML 165
Query: 661 PDSIAKDIEKACHGIYPLRDVCIRK 735
++K + C I+P+R + I K
Sbjct: 166 KGELSKKMFAECKPIFPVRRIEIIK 190
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 56.0 bits (129), Expect = 1e-06
Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Frame = +1
Query: 166 KAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAERSFRKF 345
K W V AP +F +G + N+ + + EVSL++L D S+ K
Sbjct: 25 KEWKIVIAPKIFEYKIIGYIINNKYTNNSGRLKEISKRNLEVSLSELINDYS---SYYKI 81
Query: 346 RLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 522
+ Y + + F+G L+ D + MV K L+E +I + T V+ +F + +T
Sbjct: 82 IKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YT 140
Query: 523 NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHG 702
+L Y + +++R I ++ I + + N + + D I I++
Sbjct: 141 ITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKPIDFIYKICCSDVIGNSIKRRSKR 200
Query: 703 IYPLRDVCIRKVK 741
+ P+++ I ++K
Sbjct: 201 VIPIKNFIISRIK 213
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 54.8 bits (126), Expect = 3e-06
Identities = 48/162 (29%), Positives = 70/162 (43%)
Frame = +1
Query: 274 GXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 453
G E +L DL D +FR+ V L F+GM+LT D +R +V++ +
Sbjct: 50 GRNVETTLYDLTKDLSHINVKLRFRVNG--VDDGRALTQFNGMELTRDYVRNLVRRGSSK 107
Query: 454 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 633
+ DV T DG LR+ + T T T IRK + + + + S+
Sbjct: 108 VMVIKDVTTKDGGKLRMEVLAIT---------TYRCTRTHKHLIRKSIMDRLDKVGQESD 158
Query: 634 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXR 759
+V I I D+ IYPLR V I K+KVL+ R
Sbjct: 159 FDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 52.8 bits (121), Expect = 1e-05
Identities = 34/98 (34%), Positives = 53/98 (54%)
Frame = -3
Query: 372 SLHIFGD*SEFAERPFRVSVSL*ISQGNFENXSLQSFRSNFRSLGTVDKRGADLPLAEHR 193
SLH+ G S+ + + L ISQGN ++ L+ FR + S + +K A++ AE R
Sbjct: 61 SLHVLGSQSDLPVG--MILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDR 118
Query: 192 RSLDXVPSFASEWVDKLLLNTFFTALRQALILPDRHVQ 79
R L+ +P S+ V LLL++ F L L+ PD H +
Sbjct: 119 RRLNVIPVLLSKRVGCLLLSSLF-PLGNPLVFPDDHCE 155
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 52.8 bits (121), Expect = 1e-05
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1
Query: 85 MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTT 225
MAVG+N+ G KKG K++++D F++K WY VKA +MF+ +G T
Sbjct: 1 MAVGKNKCFMKGSKKGAKKKVIDQFSKKDWYDVKALAMFNIRNIGKT 47
Score = 43.6 bits (98), Expect = 0.007
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +1
Query: 715 RDVCIRKVKVLKKXRFEISKLMELHGE 795
R +C++KVK+LKK +FE+ KLMELHG+
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGD 89
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 52.0 bits (119), Expect = 2e-05
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Frame = +1
Query: 151 DPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLK-GXVFEVSLADLQADTDAE 327
D + K WY + APS + ++ + A L G EV ++D +
Sbjct: 11 DKWKEKTWYTIVAPSFLGEREIALS--------PAADPSLMIGRKVEVPVSDFTGNFRKS 62
Query: 328 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 507
+ FR+ + G+ F G ++ D +R MV++ + I+ + KT DGY L V
Sbjct: 63 STMVIFRV--KECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL-VI 119
Query: 508 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 687
I + L+ K +R K+ I + L E+ +I D++ DI
Sbjct: 120 KIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIV 171
Query: 688 KACHGIYPLRDVCIRKVKVL 747
+YP++ + IRK +VL
Sbjct: 172 DTLKDVYPIKKIEIRKSEVL 191
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 51.6 bits (118), Expect = 3e-05
Identities = 51/213 (23%), Positives = 89/213 (41%)
Frame = +1
Query: 151 DPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAER 330
+ + K WY V+AP +V L S + V EV +++L +
Sbjct: 12 EKWKEKVWYTVEAPPYLGSKEVSVALGED-------SNSMVNRVVEVPISELTGNFKKSN 64
Query: 331 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 510
FR+ +G F G + D +R +V++ + I+ DVKT+D ++ V
Sbjct: 65 EKALFRITN--CEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKI 122
Query: 511 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 690
+ T+ + +K IRK + + I + E V LI D I D+
Sbjct: 123 VVVTDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMIS 173
Query: 691 ACHGIYPLRDVCIRKVKVLKKXRFEISKLMELH 789
A IYPL+ + +RK +++ +S + E+H
Sbjct: 174 ATKDIYPLKKIEVRKSELV-----SLSGISEIH 201
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 50.8 bits (116), Expect = 4e-05
Identities = 45/214 (21%), Positives = 91/214 (42%)
Frame = +1
Query: 136 KQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQAD 315
K ++ D + K W + AP F+ + + K G V EV+L D+
Sbjct: 5 KIKVKDKWRDKRWITIHAPDSFNSVPAARVPITDDKHAK-------GRVIEVTLFDILKG 57
Query: 316 TDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 495
+ +++ + I + V + F + + + LR +V++ + + +DVKT+DGYV
Sbjct: 58 DPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYV 116
Query: 496 LRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIA 675
R+ + T + + +K A+R + ++I V + + V I
Sbjct: 117 FRLKVLALTYRHLNTSKK---------HALRLIIRDVIENTVPQMNIDQFVQAACYGKIN 167
Query: 676 KDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKL 777
DI + +R + + KVK+++ +I+ L
Sbjct: 168 SDILSRAKKLVKVRHMGLEKVKLVRTAEEQITLL 201
>UniRef50_Q4T2V3 Cluster: Chromosome undetermined SCAF10170, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10170,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 770
Score = 37.1 bits (82), Expect = 0.59
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = -1
Query: 203 LNIDGALTXY-QALRVNGSTSCCLTPFLP--PXDRP*FCPTAMCKHKLKKKPTIV 48
LNI+ + Y Q L ++ S S LTPF+P P P F PT + H L ++ T+V
Sbjct: 351 LNIEERIPVYLQNLGIDQSPSTILTPFVPRGPIREPEFSPTDLSSHVLSEENTLV 405
>UniRef50_Q87BL9 Cluster: DNA helicase; n=5; Xylella fastidiosa|Rep:
DNA helicase - Xylella fastidiosa (strain Temecula1 /
ATCC 700964)
Length = 1190
Score = 37.1 bits (82), Expect = 0.59
Identities = 24/86 (27%), Positives = 34/86 (39%)
Frame = +1
Query: 118 GGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSL 297
G G+++Q D +W + + + Q T + A GL +VSL
Sbjct: 544 GWLSGMQRQCDDRLQEHSWAVTRGEKVLHEEQCHITTWQAALAKESALTGLMEAAGQVSL 603
Query: 298 ADLQADTDAERSFRKFRLIAEYVQGR 375
AD A D FR F L Y +GR
Sbjct: 604 ADCDALADTSIRFRIFLLTTHYWEGR 629
>UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3Ae -
Nanoarchaeum equitans
Length = 198
Score = 36.3 bits (80), Expect = 1.0
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 1/192 (0%)
Frame = +1
Query: 163 RKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASEGLKGXVFEVSLADLQADTDAERSFRK 342
RK W+ +KAP++F++ ++G T + E + G E+++A + + +
Sbjct: 12 RKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMALVTNNYQLQNYKGI 64
Query: 343 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 522
F++ V+G G+ + ++ V+ + I + +K D ++RV + T
Sbjct: 65 FKITK--VEGTTAKTELEGIKMYESIIQKWVEPGRDKITDSFVIKDKDNRLVRVKPVLIT 122
Query: 523 NKDSLSQRKTCYAQHTQVRAI-RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACH 699
N R+ Q T +R I R E+ + + +++NK IP+ + I+K
Sbjct: 123 N------RRLHRKQGTAIRNIWRNYFVELGKKLSFEDMVMKILNKEIPEQLKIQIKK--- 173
Query: 700 GIYPLRDVCIRK 735
IYP IR+
Sbjct: 174 -IYPPLFFAIRQ 184
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -1
Query: 470 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 306
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.5 bits (73), Expect = 7.2
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +1
Query: 367 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 546
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 547 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 684
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 621 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 514
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_A0YI31 Cluster: DNA mismatch repair protein; n=5;
Cyanobacteria|Rep: DNA mismatch repair protein - Lyngbya
sp. PCC 8106
Length = 563
Score = 33.1 bits (72), Expect = 9.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -1
Query: 419 LSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSAS--VSACRSARETSKTLPFNPSEAIFV 246
L VR++P ++ + C + I L+L KDL A+ +ACRSA L + +
Sbjct: 463 LWAVRTVP-EMLAQREDCHDALIELSLGKDLQAAQVATACRSAIRNGTPLSLTEMQTLLE 521
Query: 245 PWVR 234
WVR
Sbjct: 522 QWVR 525
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 33.1 bits (72), Expect = 9.6
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 631 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLME 783
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 882,855,548
Number of Sequences: 1657284
Number of extensions: 17796249
Number of successful extensions: 49365
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 47329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49321
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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