Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F02
         (878 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   368   e-103
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           28   0.43 
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        27   1.00 
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   3.0  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   7.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.3  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  368 bits (906), Expect = e-103
 Identities = 173/237 (72%), Positives = 204/237 (86%)
 Frame = +1

Query: 85  MAVGQNQGLSXGGKKGVKQQLVDPFTRKAWYXVKAPSMFSKXQVGTTLVNRTQGTKIASE 264
           MAVG+N+G+S GGKKG K+++VDPFTRK WY VKAP+MF   Q G TLVNRTQGTKIAS+
Sbjct: 1   MAVGKNKGVSKGGKKGSKKKVVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASD 60

Query: 265 GLKGXVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 444
           GLKG VFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV KW
Sbjct: 61  GLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKW 120

Query: 445 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 624
           QTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM  II R++T
Sbjct: 121 QTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREIT 180

Query: 625 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKXRFEISKLMELHGE 795
           +++L+ VV KL+PDSIAKDIEKAC  +YPL DV IRKVKVLKK RF++S LMELHG+
Sbjct: 181 STDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 237


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 289 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 450
           V+LA+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 26.6 bits (56), Expect = 1.00
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 289 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 450
           V+LA+L A +D  E    ++  + + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 705 LPSARCLHPKGESVEEXPFRDLEVDGTS 788
           +P   C H  G ++E+     LE DGT+
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGTA 584


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 735 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 649
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 853 FVALRPFRLVSGFP 812
           F  LRP RLVSG P
Sbjct: 217 FRVLRPLRLVSGVP 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 930,888
Number of Sequences: 2352
Number of extensions: 19656
Number of successful extensions: 52
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)