Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_E23
         (1150 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.                  38   0.090
M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.                  38   0.090
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  38   0.090

>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
          Length = 1270

 Score = 37.5 bits (83), Expect = 0.090
 Identities = 39/155 (25%), Positives = 45/155 (29%), Gaps = 3/155 (1%)
 Frame = +3

Query: 507  TPXTHPPHXRXPXXXNTXPXRLVPXXTTXSPPNXRASXTPHQYCXXPXXXXNPXXKXXXA 686
            T  T PP    P    T P    P  TT  PP    S  P      P     P       
Sbjct: 982  TTTTTPPPTTTPSPPTTTPIT-PPTSTTTLPPTTTPSPPPTT-TTTPPPTTTPSPPTTTT 1039

Query: 687  PSXXXPXLXXPXXNPSLXLXXSXPXVTVXGPXTXLXTSGASTRXPRSXXLXX---SXXRP 857
            PS        P    +     S P  T   P T   T+ + T  P S        S    
Sbjct: 1040 PSPPITTTTTPPPTTT----PSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTT 1095

Query: 858  XAXPPTNXPXPXPPXXPXXQXTSLXXXLKTXXLSP 962
             + PPT    P P   P    T++     T   SP
Sbjct: 1096 PSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSP 1130


>M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.
          Length = 573

 Score = 37.5 bits (83), Expect = 0.090
 Identities = 39/155 (25%), Positives = 45/155 (29%), Gaps = 3/155 (1%)
 Frame = +3

Query: 507 TPXTHPPHXRXPXXXNTXPXRLVPXXTTXSPPNXRASXTPHQYCXXPXXXXNPXXKXXXA 686
           T  T PP    P    T P    P  TT  PP    S  P      P     P       
Sbjct: 265 TTTTTPPPTTTPSPPTTTPIT-PPTSTTTLPPTTTPSPPPTT-TTTPPPTTTPSPPTTTT 322

Query: 687 PSXXXPXLXXPXXNPSLXLXXSXPXVTVXGPXTXLXTSGASTRXPRSXXLXX---SXXRP 857
           PS        P    +     S P  T   P T   T+ + T  P S        S    
Sbjct: 323 PSPPITTTTTPPPTTT----PSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTT 378

Query: 858 XAXPPTNXPXPXPPXXPXXQXTSLXXXLKTXXLSP 962
            + PPT    P P   P    T++     T   SP
Sbjct: 379 PSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSP 413


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 37.5 bits (83), Expect = 0.090
 Identities = 39/155 (25%), Positives = 45/155 (29%), Gaps = 3/155 (1%)
 Frame = +3

Query: 507  TPXTHPPHXRXPXXXNTXPXRLVPXXTTXSPPNXRASXTPHQYCXXPXXXXNPXXKXXXA 686
            T  T PP    P    T P    P  TT  PP    S  P      P     P       
Sbjct: 1607 TTTTTPPPTTTPSPPTTTPIT-PPTSTTTLPPTTTPSPPPTT-TTTPPPTTTPSPPTTTT 1664

Query: 687  PSXXXPXLXXPXXNPSLXLXXSXPXVTVXGPXTXLXTSGASTRXPRSXXLXX---SXXRP 857
            PS        P    +     S P  T   P T   T+ + T  P S        S    
Sbjct: 1665 PSPPITTTTTPPPTTT----PSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTT 1720

Query: 858  XAXPPTNXPXPXPPXXPXXQXTSLXXXLKTXXLSP 962
             + PPT    P P   P    T++     T   SP
Sbjct: 1721 PSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSP 1755


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,493,254
Number of Sequences: 237096
Number of extensions: 1257619
Number of successful extensions: 2418
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2292
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 15963406700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)