Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_E22
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine...    31   5.6  
J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein.                   31   5.6  
M95767-1|AAA35684.1|  385|Homo sapiens di-N-acetylchitobiase pro...    31   7.4  
BC126335-1|AAI26336.1|  385|Homo sapiens chitobiase, di-N-acetyl...    31   7.4  
BC126333-1|AAI26334.1|  385|Homo sapiens chitobiase, di-N-acetyl...    31   7.4  
AL359762-6|CAH70207.1|  385|Homo sapiens chitobiase, di-N-acetyl...    31   7.4  
AL359762-5|CAH70206.1|  294|Homo sapiens chitobiase, di-N-acetyl...    31   7.4  
AF085706-1|AAC35852.1|  385|Homo sapiens lysosomal di-N-acetylch...    31   7.4  

>U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine
           receptor protein.
          Length = 5038

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 148 DMESEGEVEYLEEDAEIVQQCFQTPQTRELK 240
           D E E EV++L  D E+V QC  T    +LK
Sbjct: 3   DAEGEDEVQFLRTDDEVVLQCSATVLKEQLK 33


>J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein.
          Length = 5032

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 148 DMESEGEVEYLEEDAEIVQQCFQTPQTRELK 240
           D E E EV++L  D E+V QC  T    +LK
Sbjct: 3   DAEGEDEVQFLRTDDEVVLQCSATVLKEQLK 33


>M95767-1|AAA35684.1|  385|Homo sapiens di-N-acetylchitobiase
           protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 593 YDDPLCLPVKAVKQDNSDLKRLGVWNNVCIEH 688
           YD+P  + +KA    N  L+ +G+WN  C+++
Sbjct: 330 YDNPQSISLKATYIQNYRLRGIGMWNANCLDY 361


>BC126335-1|AAI26336.1|  385|Homo sapiens chitobiase, di-N-acetyl-
           protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 593 YDDPLCLPVKAVKQDNSDLKRLGVWNNVCIEH 688
           YD+P  + +KA    N  L+ +G+WN  C+++
Sbjct: 330 YDNPQSISLKATYIQNYRLRGIGMWNANCLDY 361


>BC126333-1|AAI26334.1|  385|Homo sapiens chitobiase, di-N-acetyl-
           protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 593 YDDPLCLPVKAVKQDNSDLKRLGVWNNVCIEH 688
           YD+P  + +KA    N  L+ +G+WN  C+++
Sbjct: 330 YDNPQSISLKATYIQNYRLRGIGMWNANCLDY 361


>AL359762-6|CAH70207.1|  385|Homo sapiens chitobiase, di-N-acetyl-
           protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 593 YDDPLCLPVKAVKQDNSDLKRLGVWNNVCIEH 688
           YD+P  + +KA    N  L+ +G+WN  C+++
Sbjct: 330 YDNPQSISLKATYIQNYRLRGIGMWNANCLDY 361


>AL359762-5|CAH70206.1|  294|Homo sapiens chitobiase, di-N-acetyl-
           protein.
          Length = 294

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 593 YDDPLCLPVKAVKQDNSDLKRLGVWNNVCIEH 688
           YD+P  + +KA    N  L+ +G+WN  C+++
Sbjct: 239 YDNPQSISLKATYIQNYRLRGIGMWNANCLDY 270


>AF085706-1|AAC35852.1|  385|Homo sapiens lysosomal
           di-N-acetylchitobiase precursor protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 593 YDDPLCLPVKAVKQDNSDLKRLGVWNNVCIEH 688
           YD+P  + +KA    N  L+ +G+WN  C+++
Sbjct: 330 YDNPQSISLKATYIQNYRLRGIGMWNANCLDY 361


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,820,357
Number of Sequences: 237096
Number of extensions: 1846450
Number of successful extensions: 3062
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3062
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)