Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_E16
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 85 8e-17
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 85 8e-17
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 85 8e-17
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 84 1e-16
Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 84 1e-16
Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 84 1e-16
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 84 1e-16
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 54 1e-07
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 34 0.16
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical... 31 1.4
AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical ... 29 5.8
Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 7.7
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 28 7.7
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 28 7.7
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 7.7
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 84.6 bits (200), Expect = 8e-17
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = +1
Query: 697 QIPGCMKGRTMYVIPFSMGPVGSPLSKIGVXITDSPYVVYSMRVMTRIGAKV 852
+ PGCM GR MYV+P+SMGP+G PLSK G+ +TDSPYVV MR MTR+G KV
Sbjct: 147 RFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKV 198
Score = 72.5 bits (170), Expect = 4e-13
Identities = 38/111 (34%), Positives = 58/111 (52%)
Frame = +2
Query: 371 ATLTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLART 550
A+L+PKV+ FV A L P +++CDGS+ E L Y+N +L RT
Sbjct: 38 ASLSPKVQRFVAEKAELMNPAGIYICDGSQKEYDDIVDKLVERGVLTPLKAYENNYLCRT 97
Query: 551 DPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRF 703
DP DVARVES+T++ + + D V G + +G ++S + + RF
Sbjct: 98 DPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELDSRF 148
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 84.6 bits (200), Expect = 8e-17
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = +1
Query: 697 QIPGCMKGRTMYVIPFSMGPVGSPLSKIGVXITDSPYVVYSMRVMTRIGAKV 852
+ PGCM GR MYV+P+SMGP+G PLSK G+ +TDSPYVV MR MTR+G KV
Sbjct: 37 RFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKV 88
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 84.6 bits (200), Expect = 8e-17
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = +1
Query: 697 QIPGCMKGRTMYVIPFSMGPVGSPLSKIGVXITDSPYVVYSMRVMTRIGAKV 852
+ PGCM GR MYV+P+SMGP+G PLSK G+ +TDSPYVV MR MTR+G KV
Sbjct: 147 RFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKV 198
Score = 72.5 bits (170), Expect = 4e-13
Identities = 38/111 (34%), Positives = 58/111 (52%)
Frame = +2
Query: 371 ATLTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLART 550
A+L+PKV+ FV A L P +++CDGS+ E L Y+N +L RT
Sbjct: 38 ASLSPKVQRFVAEKAELMNPAGIYICDGSQKEYDDIVDKLVERGVLTPLKAYENNYLCRT 97
Query: 551 DPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRF 703
DP DVARVES+T++ + + D V G + +G ++S + + RF
Sbjct: 98 DPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELDSRF 148
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 84.2 bits (199), Expect = 1e-16
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +1
Query: 697 QIPGCMKGRTMYVIPFSMGPVGSPLSKIGVXITDSPYVVYSMRVMTRIGAKV 852
+ PGCM GR MYVIPFSMGPVG PLSKIG+ +TDS YVV SMR+MTR+ V
Sbjct: 160 RFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNDV 211
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/109 (33%), Positives = 59/109 (54%)
Frame = +2
Query: 377 LTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDP 556
L KV+ F+ A L +P + +CDGS+ EA +L Y+N ++ RTDP
Sbjct: 53 LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDP 112
Query: 557 ADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRF 703
DVARVES+T++ + + D V + G + +G++++P D + RF
Sbjct: 113 KDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRF 161
>Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical
protein R11A5.4d protein.
Length = 618
Score = 84.2 bits (199), Expect = 1e-16
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +1
Query: 697 QIPGCMKGRTMYVIPFSMGPVGSPLSKIGVXITDSPYVVYSMRVMTRIGAKV 852
+ PGCM GR MYVIPFSMGPVG PLSKIG+ +TDS YVV SMR+MTR+ V
Sbjct: 124 RFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNDV 175
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/109 (33%), Positives = 59/109 (54%)
Frame = +2
Query: 377 LTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDP 556
L KV+ F+ A L +P + +CDGS+ EA +L Y+N ++ RTDP
Sbjct: 17 LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDP 76
Query: 557 ADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRF 703
DVARVES+T++ + + D V + G + +G++++P D + RF
Sbjct: 77 KDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRF 125
>Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical
protein R11A5.4c protein.
Length = 587
Score = 84.2 bits (199), Expect = 1e-16
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +1
Query: 697 QIPGCMKGRTMYVIPFSMGPVGSPLSKIGVXITDSPYVVYSMRVMTRIGAKV 852
+ PGCM GR MYVIPFSMGPVG PLSKIG+ +TDS YVV SMR+MTR+ V
Sbjct: 93 RFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNDV 144
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/93 (32%), Positives = 51/93 (54%)
Frame = +2
Query: 425 QPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPADVARVESRTFICSDR 604
+P + +CDGS+ EA +L Y+N ++ RTDP DVARVES+T++ +
Sbjct: 2 RPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKDVARVESKTWMVTKN 61
Query: 605 ESDVVPSARAGQKSALGNYISPPDYEKAVSDRF 703
+ D V + G + +G++++P D + RF
Sbjct: 62 KYDTVTHTKEGVEPIMGHWLAPEDLATELDSRF 94
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 84.2 bits (199), Expect = 1e-16
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +1
Query: 697 QIPGCMKGRTMYVIPFSMGPVGSPLSKIGVXITDSPYVVYSMRVMTRIGAKV 852
+ PGCM GR MYVIPFSMGPVG PLSKIG+ +TDS YVV SMR+MTR+ V
Sbjct: 160 RFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNDV 211
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/109 (33%), Positives = 59/109 (54%)
Frame = +2
Query: 377 LTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDP 556
L KV+ F+ A L +P + +CDGS+ EA +L Y+N ++ RTDP
Sbjct: 53 LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDP 112
Query: 557 ADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRF 703
DVARVES+T++ + + D V + G + +G++++P D + RF
Sbjct: 113 KDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRF 161
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +1
Query: 712 MKGRTMYVIPFSMGPVGSPLSKIGVXITDSPYVVYSMRVMTRI 840
M GRTMYV+PFSMG +GS + +GV ITD P +V ++R R+
Sbjct: 177 MSGRTMYVVPFSMGTIGSRRAVVGVQITDDPVLVLNLRTTFRV 219
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +3
Query: 525 TITVGWPGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTDS 704
T+T P T PG P ++ P +T P PW T+PP T R P S
Sbjct: 134 TVTPPSPSVTPGGRPGSTPPATFPPGSISTVRYTPGPTPPGPWTYTAPPYYTYRTVPPAS 193
Query: 705 WLYE 716
YE
Sbjct: 194 NHYE 197
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 606 RATWSPRLAPARSPPWGTTSPPRITRRPCPTDSWLYERTHNVRDTIL 746
R++ SPR +P RSP PR + R P L+E H++RDTI+
Sbjct: 488 RSSASPRQSPRRSP----HESPRHSPRNSPQKEQLFE--HSIRDTIM 528
>AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical
protein Y111B2A.24 protein.
Length = 457
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 639 RSPPWGTTSPPRITRRPCPTDSWLYERTHNVRDTILDGSCGISSLED 779
R PP +PPR+ P T+S ERTH T+ + S G S++ D
Sbjct: 203 RDPPTAQGAPPRVFEFPDSTESQFRERTHR---TVTE-SYGASTVAD 245
>AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical
protein Y43F8C.6 protein.
Length = 422
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 310 MQPRCPPNCSARVDEAFPTAGHSYSK 387
M P N +A+V E F TAGH++ K
Sbjct: 144 MDQPAPVNLAAKVAEVFLTAGHAFQK 169
>Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical
protein F54E4.4 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 AALPTKLLCEGRRSLPHSWPLLLQRSARSWSAALLCASR-STCTCAT 452
A +PT +CE + SL W + S + L CA TC CA+
Sbjct: 247 APIPTPKVCEDKHSLCCFWATTGECSRNPFWMKLNCAKTCGTCDCAS 293
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 516 CPNTITVGWPGQTRQTLPGLNPARSYAPIG-RATWSPRLAPA-RSPPWGTTSPPRITRRP 689
CP P + + P P S A G RA + R PA R+PP T +PP T RP
Sbjct: 276 CPQRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPP-ATTRP 334
Query: 690 CP 695
P
Sbjct: 335 AP 336
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +3
Query: 522 NTITVGWP---GQTRQTLP-GLNPAR--SYAPIGRATWSPRLAPARSPP 650
N++ + WP G + L G A+ S +PI RAT SPR P+ PP
Sbjct: 393 NSLEISWPIVQGASGYFLQIGFGDAKEQSVSPIKRATTSPRKQPSIVPP 441
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +3
Query: 522 NTITVGWP---GQTRQTLP-GLNPAR--SYAPIGRATWSPRLAPARSPP 650
N++ + WP G + L G A+ S +PI RAT SPR P+ PP
Sbjct: 393 NSLEISWPIVQGASGYFLQIGFGDAKEQSVSPIKRATTSPRKQPSIVPP 441
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +3
Query: 579 PARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTDSWLY 713
P+ S P GR +P PA PP G+ S R T P P W Y
Sbjct: 215 PSPSVTPGGRPGSTP---PATFPP-GSVSTVRYTPGPTPPAPWTY 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,214,011
Number of Sequences: 27780
Number of extensions: 378127
Number of successful extensions: 1359
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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