Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_E08
         (874 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061517-1|AAL29065.1|  256|Drosophila melanogaster LD47064p pro...   225   5e-59
AE013599-1019|AAF58844.1|  256|Drosophila melanogaster CG1381-PA...   225   5e-59

>AY061517-1|AAL29065.1|  256|Drosophila melanogaster LD47064p
           protein.
          Length = 256

 Score =  225 bits (551), Expect = 5e-59
 Identities = 104/190 (54%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
 Frame = +3

Query: 153 MPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDW 332
           MP+SKRDKKVSLTKT++KGL  KQ+++++IR  + KY +IF+F + NMRN+ LKDLR + 
Sbjct: 1   MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEL 60

Query: 333 K-DSRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSY 509
           K +SRF FGKN+VM I LG+TKS+E+E +L+ LSK+L GQ GLL T++   +VL W ++Y
Sbjct: 61  KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120

Query: 510 QASEYARAGFIATKDVLLPKGPLADFSHTIEPHLRRLGLPTSLEKGVINLIKEYQGLQER 689
            A EYAR+GF+AT+ V LP GPL DF+H++EPHLR LGLPT LEKG++ L  +Y   +E 
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180

Query: 690 CSTDPRNKQV 719
               P   ++
Sbjct: 181 KVLTPEQARI 190



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
 Frame = +2

Query: 707 KQASILKLIGIEMADFKLVIKCHWTKGKG--IHIDNDAPSDEEXAENDDHQE 856
           +QA ILKL+G  MA F+L +KC WTK +G  +H+++D  +DEE A++   +E
Sbjct: 186 EQARILKLVGKPMAKFRLTMKCSWTKSEGFQLHVEDDV-NDEEQADSAMEEE 236


>AE013599-1019|AAF58844.1|  256|Drosophila melanogaster CG1381-PA
           protein.
          Length = 256

 Score =  225 bits (551), Expect = 5e-59
 Identities = 104/190 (54%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
 Frame = +3

Query: 153 MPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDW 332
           MP+SKRDKKVSLTKT++KGL  KQ+++++IR  + KY +IF+F + NMRN+ LKDLR + 
Sbjct: 1   MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEL 60

Query: 333 K-DSRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSY 509
           K +SRF FGKN+VM I LG+TKS+E+E +L+ LSK+L GQ GLL T++   +VL W ++Y
Sbjct: 61  KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120

Query: 510 QASEYARAGFIATKDVLLPKGPLADFSHTIEPHLRRLGLPTSLEKGVINLIKEYQGLQER 689
            A EYAR+GF+AT+ V LP GPL DF+H++EPHLR LGLPT LEKG++ L  +Y   +E 
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180

Query: 690 CSTDPRNKQV 719
               P   ++
Sbjct: 181 KVLTPEQARI 190



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
 Frame = +2

Query: 707 KQASILKLIGIEMADFKLVIKCHWTKGKG--IHIDNDAPSDEEXAENDDHQE 856
           +QA ILKL+G  MA F+L +KC WTK +G  +H+++D  +DEE A++   +E
Sbjct: 186 EQARILKLVGKPMAKFRLTMKCSWTKSEGFQLHVEDDV-NDEEQADSAMEEE 236


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,847,525
Number of Sequences: 53049
Number of extensions: 685756
Number of successful extensions: 1803
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)