Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_E08
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 180 9e-46
Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 30 2.5
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 29 4.3
L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein regul... 29 5.7
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 29 5.7
U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm recept... 28 7.6
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 28 7.6
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 180 bits (439), Expect = 9e-46
Identities = 87/179 (48%), Positives = 125/179 (69%), Gaps = 1/179 (0%)
Frame = +3
Query: 153 MPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDW 332
M +S+RDK VSLTK KK K ++ E+R S+ +Y+++F+FTI NMR+T+ +R +
Sbjct: 1 MARSRRDKNVSLTKVKKKTKDTKNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 333 KD-SRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSY 509
K+ SRFFFGKN V++IALGK KSDE QL+ S LKGQCGL+ TN +V F
Sbjct: 61 KENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEA 120
Query: 510 QASEYARAGFIATKDVLLPKGPLADFSHTIEPHLRRLGLPTSLEKGVINLIKEYQGLQE 686
+YAR G +AT+ V+LP+GP++ F+ ++EP LR+LGLPT L+KGVI L ++++ +E
Sbjct: 121 SEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKE 179
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 707 KQASILKLIGIEMADFKLVIKCHWTKGKG 793
+QA ILK ++M+ F+L+ K HW K G
Sbjct: 186 EQAKILKHFEVKMSQFRLIFKAHWNKKDG 214
>Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.10 protein.
Length = 283
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = -1
Query: 505 LLNQFSTSGTSLFVISNPH*PFNFFDNRFSCSSISSLLVLPRAI--AITLFFPKKNLESF 332
LL Q ST F+I N H F+ S ++ S+L L A+ I ++FP F
Sbjct: 67 LLTQISTD----FIIKNVH--FSLVIPAASIGNMRSVLTLLIALERVIAIYFPI----FF 116
Query: 331 QSFRRSF-NFVFLMLLMVNKNMCSYLLSEF 245
+R+ NFVFL++++ ++ Y++ F
Sbjct: 117 HIYRQKLPNFVFLLIILTSELFNQYMIFGF 146
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 150 NMPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFL 278
+M ++ D+ V T +KKG KQ IE+I S+ EHI L
Sbjct: 37 SMVMTEEDRNV-FTSIDKKGGGSKQMAIEDIYQKKSQLEHILL 78
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 150 NMPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFL 278
+M ++ D+ V T +KKG KQ IE+I S+ EHI L
Sbjct: 37 SMVMTEEDRNV-FTSIDKKGGGSKQMAIEDIYQKKSQLEHILL 78
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 803 DNDAPSDEEXAENDDHQENVLVD 871
+ D P DEE AEN ++ ENVL D
Sbjct: 42 EEDVPDDEETAENLENLENVLDD 64
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 387 KTKSDE---IEEQLNLLSKKLKGQCGLLMTNRDVP-DVLNWFKSYQASEYARAGFIATKD 554
K K +E I+ +N L +K++ + +R D +N F S+ A ++
Sbjct: 429 KRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKDAINKFGSHMAEILMEINRSKSRF 488
Query: 555 VLLPKGPLADFSHTIEP 605
+PKGPL + I+P
Sbjct: 489 QTVPKGPLGKYITLIDP 505
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 387 KTKSDE---IEEQLNLLSKKLKGQCGLLMTNRDVP-DVLNWFKSYQASEYARAGFIATKD 554
K K +E I+ +N L +K++ + +R D +N F S+ A ++
Sbjct: 429 KRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKDAINKFGSHMAEILMEINRSKSRF 488
Query: 555 VLLPKGPLADFSHTIEP 605
+PKGPL + I+P
Sbjct: 489 QTVPKGPLGKYITLIDP 505
>L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein
regulator protein 1 protein.
Length = 525
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 492 SVHQAHLYLSLAIHTDLLIFLITDLVALLFH 400
+VH A+ +L TDLL F+I DL + LF+
Sbjct: 225 AVHIAYYDKALYAETDLLFFIIRDLRSALFY 255
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -1
Query: 805 VYMDTFSFCPVTFNH*LKICHFYAYQF*YTCLFLGSVEHLSCKP*YSFIRLITPFSRDVG 626
+ M TF F P+ F H I + + LFLG++ S +P IR+ S ++
Sbjct: 939 ILMSTFFFLPIIFTHSQTILTSFLH---IPVLFLGTL-FTSFEPKSKIIRIAPKNSSEIP 994
Query: 625 KPKRLK 608
K ++LK
Sbjct: 995 KVEKLK 1000
>U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm receptor
protein 136 protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 536 LHCNKRCFITQRSSSRFFTHY*ATFKTFGLTYISRKRCY 652
LHC F+ S +FF Y A KT L Y+ K+ +
Sbjct: 98 LHCVLTGFVASLLSCQFFYRYVALCKTHLLVYLQGKKLF 136
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 776 WTKGKGIHIDNDAPSDEEXAENDDHQEN 859
W K + ID+D +EE ENDD +EN
Sbjct: 664 WEKKNKVMIDSD--DEEEEEENDDDKEN 689
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,506,755
Number of Sequences: 27780
Number of extensions: 399891
Number of successful extensions: 1196
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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