Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_E06
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 75 1e-14
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 70 5e-13
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 69 9e-13
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 50 6e-07
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 46 7e-06
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 39 8e-04
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 38 0.001
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 37 0.003
SPBC211.01 |rsm10|SPBC23E6.11|mitochondrial ribosomal protein su... 31 0.30
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 26 8.5
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 75.4 bits (177), Expect = 1e-14
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = +1
Query: 124 IELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL--DADE 297
IEL NF K V ++ F+APWCG+CK LVP Y+K A L ++ V A+ DAD+
Sbjct: 34 IELNSKNFRKFVKAKGPSLVV-FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQ 92
Query: 298 HRSVSQKYGVTGFPTIKI 351
+R+V +Y V GFPTIK+
Sbjct: 93 NRAVCSQYQVQGFPTIKL 110
Score = 47.6 bits (108), Expect = 2e-06
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +2
Query: 497 ITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKLGALDATVHT 676
I L NF++ V LV FYAPWCG+CK L P + K A+ L + + A+D
Sbjct: 34 IELNSKNFRKFVKAKGPS-LVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQ 92
Query: 677 TNGV 688
V
Sbjct: 93 NRAV 96
Score = 47.6 bits (108), Expect = 2e-06
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 681 MASRYQVQGYPTIKL-FPSGKKSSDSAEDYNGGRTSSDIVTWALEKLAENV 830
+ S+YQVQG+PTIKL +PS K SS S+ DYNG R+ + + + + V
Sbjct: 96 VCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSIPSKV 146
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 69.7 bits (163), Expect = 5e-13
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Frame = +1
Query: 121 VIELTPSN-FDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVGALDA 291
V+EL N + + S + +IEF+A WCGHCKSL P Y++ + V +G +DA
Sbjct: 22 VVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDA 81
Query: 292 DEHRSVSQKYGVTGFPTI 345
D H V+ KY +TGFPT+
Sbjct: 82 DTHSDVADKYHITGFPTL 99
Score = 66.9 bits (156), Expect = 4e-12
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 121 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALDAD 294
V+EL NFDK+V + + ++EF+A WCG+CK L P Y+ + K V++ ++AD
Sbjct: 142 VVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINAD 201
Query: 295 EHRSVSQKYGVTGFPTIKIF 354
+ + + V FPTIK F
Sbjct: 202 VFADIGRLHEVASFPTIKFF 221
Score = 46.4 bits (105), Expect = 6e-06
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 494 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELKGK--VKLGALDAT 667
V+ L NF ++V+D LVEFYA WCG+CK L P + K + V++ ++A
Sbjct: 142 VVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINAD 201
Query: 668 VHTTNG 685
V G
Sbjct: 202 VFADIG 207
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 554 LVEFYAPWCGHCKNLEPHWAK--AATELKGKVKLGALDATVHT 676
L+EFYA WCGHCK+L P + + A E V +G +DA H+
Sbjct: 43 LIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHS 85
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 693 YQVQGYPTIKLFPSGKKSSDSAEDYNGGRTSSDIVTWALEKLAENVPAPD 842
++V +PTIK FP K D E Y G R+ ++ + + K + +PD
Sbjct: 210 HEVASFPTIKFFP--KDDKDKPELYEGDRSLESLIEY-INKKSGTQRSPD 256
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 68.9 bits (161), Expect = 9e-13
Identities = 28/79 (35%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL-KGIVKVGALDADE 297
V ++ ++L+T +D++ +++F+APWCGHCK+L PEY+ AA L K + + +D E
Sbjct: 24 VPKVNKEGLNELIT-ADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTE 82
Query: 298 HRSVSQKYGVTGFPTIKIF 354
+ +Y + G+PT+ +F
Sbjct: 83 EGDLCSEYSIRGYPTLNVF 101
Score = 65.3 bits (152), Expect = 1e-11
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = +1
Query: 121 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVGALDAD 294
++ L NFD +V + + ++EF+APWCGHCK+L P Y+K A V V +DA
Sbjct: 357 LVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDAT 416
Query: 295 EHRSVSQKYGVTGFPTIKIFTGXQAHTISRSEDSRRI 405
E+ +S ++GFPTI F R E R +
Sbjct: 417 EN-DIS--VSISGFPTIMFFKANDKVNPVRYEGDRTL 450
Score = 60.9 bits (141), Expect = 2e-10
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +2
Query: 494 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK--GKVKLGALDAT 667
++ L NF ++V+D LVEFYAPWCGHCKNL P + K A E V + +DAT
Sbjct: 357 LVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDAT 416
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 530 VLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATEL-KGKVKLGALDAT 667
++ +D + +V+FYAPWCGHCK L P + AA EL K + L +D T
Sbjct: 35 LITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCT 81
Score = 33.5 bits (73), Expect = 0.042
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 681 MASRYQVQGYPTIKLFPSGKKSSDSAEDYNGGRTSSDIVTWALEKLAENV 830
+ S Y ++GYPT+ +F +GK+ S Y+G R +V + ++L V
Sbjct: 86 LCSEYSIRGYPTLNVFKNGKQIS----QYSGPRKHDALVKYMRKQLLPTV 131
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 49.6 bits (113), Expect = 6e-07
Identities = 22/68 (32%), Positives = 41/68 (60%)
Frame = +1
Query: 163 NSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPT 342
++D++ +++F+A WCG CK L P +K + + + A++AD+ ++QK GV PT
Sbjct: 33 SADKVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFI-AVNADKFSDIAQKNGVYALPT 91
Query: 343 IKIFTGXQ 366
+ +F Q
Sbjct: 92 MVLFRKGQ 99
Score = 36.3 bits (80), Expect = 0.006
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 533 LDSDDLWLVEFYAPWCGHCKNLEPHWAKAATE 628
+ +D + +V+FYA WCG CK L+P K + +
Sbjct: 32 ISADKVTVVDFYADWCGPCKYLKPFLEKLSEQ 63
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 46.0 bits (104), Expect = 7e-06
Identities = 18/78 (23%), Positives = 44/78 (56%)
Frame = +1
Query: 121 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEH 300
V +++ S+ K + D++ +++FFA WCG CK++ P++++ + + +D D+
Sbjct: 2 VKQVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFI-KVDVDQL 60
Query: 301 RSVSQKYGVTGFPTIKIF 354
++ + GV P+ ++
Sbjct: 61 SEIAAEAGVHAMPSFFLY 78
Score = 35.5 bits (78), Expect = 0.010
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 512 SNFKELVLDSDDLWLVEFYAPWCGHCKNLEP 604
S FK +V D L +V+F+A WCG CK + P
Sbjct: 9 SEFKSIVCQ-DKLVVVDFFATWCGPCKAIAP 38
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 39.1 bits (87), Expect = 8e-04
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 497 ITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVK 646
+ LTD++ + V S W +++Y P CG CK L P W + K +V+
Sbjct: 29 VPLTDNDLESEV--SKGTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVE 76
Score = 35.1 bits (77), Expect = 0.014
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +1
Query: 139 SNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQK 318
++ D +T+ E W I+F++ C C + + A ++G + V ++ + ++
Sbjct: 289 ADIDAALTDK-EGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAVSKRACKQ 347
Query: 319 YGVTGFPTIKIF 354
Y + FPT F
Sbjct: 348 YSIQYFPTFLFF 359
Score = 33.9 bits (74), Expect = 0.032
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +2
Query: 524 ELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKLGALDATV 670
+ L + W ++FY+ C C ++ W A ++GK+ + ++ V
Sbjct: 292 DAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAV 340
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 124 IELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL---DAD 294
+ LT ++ + V+ W I+++ P CG CK L P + K V+ + D
Sbjct: 29 VPLTDNDLESEVSKGT--WFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVD 86
Query: 295 EHRSVSQKYGVTGFPTIKIF 354
+ +S + PT+ ++
Sbjct: 87 CSKELSSCANIRAVPTLYLY 106
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 184 IEFFAPWCGHCKSLVPEYKKAARALKGIVKVGA-LDADEHRSVSQKYGVTGFPTIKIF 354
++ +A WCG CK++ P + + A V A ++ DE R ++ GV PT F
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Score = 29.9 bits (64), Expect = 0.52
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 557 VEFYAPWCGHCKNLEPHWAKAATE 628
V+ YA WCG CK + P +++ A++
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASK 47
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 124 IELT-PSNFDKLVTNSDE-IWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 297
+E+T F +++ N E I ++ F+APW CK + + + A+ K V + ++A++
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL-KIEAEK 61
Query: 298 HRSVSQKYGVTGFPTIKIFTG 360
+++ + V P + G
Sbjct: 62 FSDIAESFDVNAVPLFVLIHG 82
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 518 FKELVLDS-DDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKL 649
F+E++ + + + L+ FYAPW CK + + + A + K V L
Sbjct: 11 FQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL 55
>SPBC211.01 |rsm10|SPBC23E6.11|mitochondrial ribosomal protein
subunit S10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 224
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 717 IKLFPSGKKSSDSAEDYNGGRTSSDIVTWALEKLAENVP 833
+K F S KS+D+ ++ G + DI+T EKL N P
Sbjct: 174 LKNFESQSKSTDNFKELLNGPSKKDIITQNAEKLLRNDP 212
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = +3
Query: 612 LKLPPNLKER*NWVPWMQQFTQQMASRYQVQGYPTIKLFPS 734
+ +PP +K N+V + +FT+ +A++ + G ++++PS
Sbjct: 180 IPVPPAMKNHGNYVMSLAEFTRWLAAKAEEYG---VEIYPS 217
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,527,116
Number of Sequences: 5004
Number of extensions: 72745
Number of successful extensions: 233
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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