Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_E05
(959 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 4e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.026
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.3
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 29 1.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.7
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.9
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 3.9
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 40.3 bits (90), Expect = 4e-04
Identities = 30/112 (26%), Positives = 32/112 (28%)
Frame = +3
Query: 600 PPPXPXXXXXPXXXXXGAXXXPPPXGGGXXPPPPRXXXPPKXXFFXXXRPXXXPPPXGXX 779
P P P P GA P P P P P +P PP
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP-------VPKPSVAAPPVPAP 1155
Query: 780 GGXXXFXXPPPPPXKTXXKXPXPXXGGAPPPRGXXXXXXXPPPXXPPPXPXP 935
G P P P P P G P P+ PPP PP P P
Sbjct: 1156 SGAP----PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 39.5 bits (88), Expect = 7e-04
Identities = 30/113 (26%), Positives = 31/113 (27%), Gaps = 2/113 (1%)
Frame = +3
Query: 603 PPXPXXXXXPXXXXXGAXXXPPPXGGGXXP-PPPRXXXPPKXXFFXXXRPXXXPPPXGXX 779
PP P P P P G P P P PP P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA--PSGAPPVPKPSVAAP 1169
Query: 780 GGXXXFXXPPPPPXKTXXKXPXPXXGGAPP-PRGXXXXXXXPPPXXPPPXPXP 935
PP P P P APP P+ PPP PP P P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 39.1 bits (87), Expect = 0.001
Identities = 30/115 (26%), Positives = 33/115 (28%), Gaps = 4/115 (3%)
Frame = +3
Query: 603 PPXPXXXXXPXXXXXGAXXXPPPXGGGXXPPPPRXXXPPKXXFFXXXRPXXXPP---PXG 773
PP P P + P P P P P P PP P G
Sbjct: 1032 PPIPVPSTAPPVPIPTSTP-PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 774 XXGGXXXFXXPPPPPXKTXXKXPXPXXGGAPP-PRGXXXXXXXPPPXXPPPXPXP 935
PP P + P P GAPP P+ P P PP P P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/108 (25%), Positives = 28/108 (25%)
Frame = +3
Query: 600 PPPXPXXXXXPXXXXXGAXXXPPPXGGGXXPPPPRXXXPPKXXFFXXXRPXXXPPPXGXX 779
P P P P GA P P P P PP P PP
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV-PPVPPPSEAPP 1199
Query: 780 GGXXXFXXPPPPPXKTXXKXPXPXXGGAPPPRGXXXXXXXPPPXXPPP 923
PP PP T P P G P P P P P
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 34.3 bits (75), Expect = 0.026
Identities = 31/116 (26%), Positives = 31/116 (26%), Gaps = 4/116 (3%)
Frame = +3
Query: 600 PPPXPXXXXXPXXXXXGAXXXPPPXGGGXXPPPPRXXXP-PKXXFFXXXRPXXX---PPP 767
P P P P GA P P P P P PK P PP
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV 1181
Query: 768 XGXXGGXXXFXXPPPPPXKTXXKXPXPXXGGAPPPRGXXXXXXXPPPXXPPPXPXP 935
G PP PP P P G P P P PP P P
Sbjct: 1182 PKPAAGV-----PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 31.9 bits (69), Expect = 0.14
Identities = 28/115 (24%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Frame = +3
Query: 600 PPPXPXXXXXPXXXXXGAXXXPPPXGGGXXPPP-PRXXXP-PKXXFFXXXRPXXXPPPXG 773
PP P A P P P P P P PK P P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 774 XXGGXXXFXXPPPPPXKTXXKX-PXPXXGGAPPPRGXXXXXXXPPPXXPPPXPXP 935
PP P + P P P P+ P P PP P P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 29.9 bits (64), Expect = 0.56
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Frame = +2
Query: 746 AXPGPPPXXXXGXGGXXXXXPPPPXXNXXKXPXPXXXXGPPP--PGXXXXXXXPPPXXXP 919
A P P P PP P + P P G PP P P P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 920 PXPPP 934
P PPP
Sbjct: 1209 PVPPP 1213
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 804 PPPPPXKTXXKXPXPXXGGAPPPRGXXXXXXXPPPXXPPPXP 929
P P P P P GG PPP PP PPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.7 bits (76), Expect = 0.020
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = +3
Query: 600 PPPXPXXXXXPXXXXXGAXXXPP-PXGGGXXPPPPRXXXPPKXXFFXXXRPXXXPPPXGX 776
PPP P P PP P GG PPPP PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGG--PPPP----PPPPGVAGAGPPPPPPPPPAV 785
Query: 777 XGGXXXFXXPPP 812
G + P P
Sbjct: 786 SAGGSRYYAPAP 797
Score = 34.7 bits (76), Expect = 0.020
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = +3
Query: 804 PPPPPXKTXXKXPXPXXGGAPPPRGXXXXXXXPPP------XXPPPXPXP 935
PPPPP P P PPP PPP PPP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.1 bits (67), Expect = 0.24
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = +3
Query: 690 PPPPRXXXPPKXXFFXXXRPXXXPPPXGXXGGXXXFXXPPPPPXKTXXKXPXPXXGGAPP 869
PPPP P P PPP GG PPPPP P P P
Sbjct: 734 PPPPAVIVPTPAP-----APIPVPPPAPIMGGPP----PPPPPPGVAGAGPPPPPPPPPA 784
Query: 870 PRGXXXXXXXPPPXXPP 920
P P P
Sbjct: 785 VSAGGSRYYAPAPQAEP 801
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +2
Query: 806 PPPPXXNXXKXPXPXXXXGPPPPGXXXXXXXPPPXXXPPXPP 931
P P P GPPPP P PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.9
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 663 PPPXGGGXXPPPPRXXXPPKXXFFXXXRPXXXPPPXGXXGGXXXFXXPPPP 815
PPP P P PP P PPP G G PPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGP-PP-PPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.026
Identities = 29/93 (31%), Positives = 30/93 (32%), Gaps = 11/93 (11%)
Frame = +3
Query: 690 PPPPRXXXPPKXXFFXXXRPXXXPPPXGXXGGXXXFXXPPPPPXKTXX-KXPXPXXGGA- 863
PPPP PP R PP G PPPPP P P G +
Sbjct: 311 PPPP---PPPS-------RRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSA 360
Query: 864 ---PPPRGXXXXXXXPPPXXP------PPXPXP 935
PPPR PPP PP P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 30.3 bits (65), Expect = 0.42
Identities = 30/110 (27%), Positives = 31/110 (28%)
Frame = +3
Query: 600 PPPXPXXXXXPXXXXXGAXXXPPPXGGGXXPPPPRXXXPPKXXFFXXXRPXXXPPPXGXX 779
PPP P P G+ PP PPPPR PPP
Sbjct: 337 PPPPPP----PRSNAAGSIPLPPQGRSAPPPPPPR----------SAPSTGRQPPPLS-- 380
Query: 780 GGXXXFXXPPPPPXKTXXKXPXPXXGGAPPPRGXXXXXXXPPPXXPPPXP 929
P PPP P A PP G PP PP P
Sbjct: 381 SSRAVSNPPAPPPAIPGRSAP------ALPPLGNASRTSTPPVPTPPSLP 424
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 805 PPPPXXKPXKXPXPPXXXGPPP 870
PP P P P PP PPP
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPP 478
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.3
Identities = 24/62 (38%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -3
Query: 933 GGGXGGXXXGGGXXXXXXXPGG-GGPXXXXGXGXFXXFXXGGGGXXXXXPPXPXXXXGGG 757
GGG GG GGG PGG GG G G G GG P GGG
Sbjct: 187 GGGFGG--FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGP-GGFGGG 243
Query: 756 PG 751
PG
Sbjct: 244 PG 245
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -3
Query: 933 GGGXGGXXXGGGXXXXXXXPGG--GGPXXXXGXG 838
GGG GG GGG PGG GGP G G
Sbjct: 241 GGGPGGF--GGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.6 bits (56), Expect = 5.2
Identities = 28/86 (32%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Frame = -2
Query: 928 GXGGGXXGGGXXXXXXXPRG-GGAPPXXGXGXFXXVXXGGGGGXXXXXXPP----XXPXG 764
G GG GGG P G GG G G G GGG P P G
Sbjct: 188 GGFGGF-GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 763 -GGXXXGRXXXKKXFXGGXXXRGGGG 689
GG G F GG GG G
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 930 GGXGGXXXGGGXXXXXXXPGGGGPXXXXGXGXFXXFXXGGGG 805
GG GG GGG PGG G G F G GG
Sbjct: 221 GGHGGF--GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Score = 26.2 bits (55), Expect = 6.9
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -3
Query: 933 GGGXGGXXXG-GGXXXXXXXPGGGGPXXXXGXGXFXXFXXGGGG 805
GGG GG G GG GGG G G F G GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 804 PPPPPXKTXXKXPXPXXGGAPPPRG 878
PPPPP + P P + PPRG
Sbjct: 419 PPPPPISSSSTTPRPDDKPSLPPRG 443
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 808 PPPXXKPXKXPXPPXXXGPPPPGXXXXXXXXPPXXXPPXXPXXXXP 945
PP P P PP PPPP PP PP P P
Sbjct: 1699 PPQMSAPT--PPPPPMSVPPPPSAPPMPAG-PPSAPPPPLPASSAP 1741
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 816 PXKTXXKXPXPXXGGAPPPRGXXXXXXXPPPXXPPPXP 929
P + P P PPP PP PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Frame = +1
Query: 805 PPPPXXKPXKXPXPPXXXGPP--PP 873
PPPP P PP GPP PP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 663 PPPXGGGXXPPPPRXXXPPKXXFFXXXRPXXXPPP 767
PP PPPP PP P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 805 PPPPXXKPXKXPXPPXXXGPPPPG 876
PPPP +P P P PPPPG
Sbjct: 13 PPPPGFEPPSQPPP-----PPPPG 31
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 536 PPPPPPPXXXKKK 498
PPPPPPP KK+
Sbjct: 24 PPPPPPPGYVKKR 36
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 863 PPPPGXXXXXXXPPPXXXPPXPPP 934
PPPPG PP PP PPP
Sbjct: 13 PPPPGFE------PPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = +1
Query: 748 PXXXPPXXAGXXGXXXXXXPPPPXXKPXKXPXPPXXXGPPPPGXXXXXXXXPPXXXPP 921
P PP A P P P P P P P PP PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 536 PPPPPPPXXXKKK 498
PPPPPPP +KK
Sbjct: 1096 PPPPPPPAEVEKK 1108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,086,207
Number of Sequences: 5004
Number of extensions: 36166
Number of successful extensions: 431
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 491307756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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