Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_D23
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0342 - 2691294-2691441,2691589-2691667,2691737-2691799,269...    31   1.6  
04_04_0819 - 28312667-28313219,28315157-28316430                       30   2.1  
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804...    29   4.9  

>05_01_0342 -
           2691294-2691441,2691589-2691667,2691737-2691799,
           2692852-2692917,2694939-2695004,2695194-2695283,
           2695376-2695463,2695552-2695629,2695732-2695824,
           2695907-2696024,2696418-2696539,2696633-2696930,
           2697645-2697649
          Length = 437

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/48 (33%), Positives = 30/48 (62%)
 Frame = +3

Query: 531 IKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKEIPKG 674
           +K + EGSI+ ++  + +GD IE LNGE +      ++ ++L E+ +G
Sbjct: 179 VKEVSEGSILEKLG-VRIGDIIECLNGERIYDT--IQLEELLLELCEG 223


>04_04_0819 - 28312667-28313219,28315157-28316430
          Length = 608

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 842 VIVLIFNCC-LPFALKRRVSFPEPKFCFFPDLPLPVLGP 729
           V  L F+C  L  A +RR+++  PK   F DL   V GP
Sbjct: 75  VAALTFHCMMLLVACRRRLAYDHPKIASFGDLGAAVCGP 113


>01_01_1018 -
           8046819-8046876,8046995-8047212,8048099-8048177,
           8048455-8048540,8048698-8048983,8049063-8049205,
           8049308-8049508,8049626-8049754,8050463-8050738,
           8050823-8051098,8051364-8052364,8052452-8052634,
           8052865-8052937,8053205-8053313,8053622-8053785
          Length = 1093

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 29/111 (26%), Positives = 49/111 (44%)
 Frame = +3

Query: 348 DILFCTLNTHKVDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYA 527
           D + CT N H +DM +L G  +  E+     R+    E++  K  D L  T+  +G    
Sbjct: 425 DNIACTDNVHGMDMVRLSGSAVQTEEEF--RRENSDIEMKDAKV-DLLDQTL--SGDSLR 479

Query: 528 FIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKEIPKGTT 680
             KR +  S++  +   E+ DH+  LN +    K   E    ++ +P   T
Sbjct: 480 ARKR-RGASVLYALTSEELKDHLCTLNHDTSQSKVPTEELLSVEGLPDQNT 529


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,663,491
Number of Sequences: 37544
Number of extensions: 403046
Number of successful extensions: 1001
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)