Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_D22
         (900 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    23   5.0  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    23   5.0  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    23   5.0  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    23   5.0  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    23   5.0  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    23   5.0  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    23   5.0  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   5.0  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   5.0  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   5.0  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   5.0  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   5.0  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   5.0  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   5.0  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    23   5.0  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   5.0  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   8.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   8.8  

>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 102 RPIMVRPWVPMRGQVPGSR 120


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 102 RPIMVRPWVPMRGQVPGSR 120


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 102 RPIMVRPWVPMRGQVPGSR 120


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 102 RPIMVRPWVPMRGQVPGSR 120


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 102 RPIMVRPWVPMRGQVPGSR 120


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 102 RPIMVRPWVPMRGQVPGSR 120


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 102 RPIMVRPWVPMRGQVPGSR 120


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 351 RPIMVRPWVPMRGQVPGSR 369


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 351 RPIMVRPWVPMRGQVPGSR 369


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 351 RPIMVRPWVPMRGQVPGSR 369


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 351 RPIMVRPWVPMRGQVPGSR 369


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 351 RPIMVRPWVPMRGQVPGSR 369


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 351 RPIMVRPWVPMRGQVPGSR 369


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 350 RPIMVRPWVPMRGQVPGSR 368


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 335 RPIMVRPWVPMRGQVPGSR 353


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  RESLLRXWPPLSSRAPGAR 85
           R  ++R W P+  + PG+R
Sbjct: 351 RPIMVRPWVPMRGQVPGSR 369


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 72  HXAPENGHIYRVTRQRILSL 131
           H      H Y VTRQ++L L
Sbjct: 122 HHDDARPHTYLVTRQKLLEL 141


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +2

Query: 65  SRAPGARERSHLS 103
           SR+PG+R+RS+ S
Sbjct: 82  SRSPGSRDRSNTS 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,813
Number of Sequences: 438
Number of extensions: 4853
Number of successful extensions: 27
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)