Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_D21
(879 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 141 3e-33
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 141 3e-33
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 141 3e-33
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 141 3e-33
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 141 3e-33
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 141 3e-33
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 141 3e-33
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 140 8e-33
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 139 1e-32
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 134 4e-31
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 132 1e-30
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 69 3e-11
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 41 0.005
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 37 0.084
BC111705-1|AAI11706.1| 464|Homo sapiens NAPSB protein protein. 34 0.59
BC026291-1|AAH26291.1| 440|Homo sapiens SLC22A12 protein protein. 32 2.4
BC030534-1|AAH30534.1| 690|Homo sapiens CEP68 protein protein. 31 5.5
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 7.3
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 31 7.3
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 7.3
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 31 7.3
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 7.3
BC028004-1|AAH28004.1| 621|Homo sapiens DMXL1 protein protein. 31 7.3
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 7.3
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 7.3
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 7.3
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 7.3
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 7.3
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 141 bits (342), Expect = 3e-33
Identities = 64/81 (79%), Positives = 73/81 (90%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN GRAK GRGHV+ +R
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIR 22
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 141 bits (342), Expect = 3e-33
Identities = 64/81 (79%), Positives = 73/81 (90%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN GRAK GRGHV+ +R
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIR 22
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 141 bits (342), Expect = 3e-33
Identities = 64/81 (79%), Positives = 73/81 (90%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN GRAK GRGHV+ +R
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIR 22
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 141 bits (342), Expect = 3e-33
Identities = 64/81 (79%), Positives = 73/81 (90%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN GRAK GRGHV+ +R
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIR 22
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 141 bits (342), Expect = 3e-33
Identities = 64/81 (79%), Positives = 73/81 (90%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN GRAK GRGHV+ +R
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIR 22
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 141 bits (342), Expect = 3e-33
Identities = 64/81 (79%), Positives = 73/81 (90%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN GRAK GRGHV+ +R
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIR 22
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 141 bits (342), Expect = 3e-33
Identities = 64/81 (79%), Positives = 73/81 (90%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN GRAK GRGHV+ +R
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIR 22
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 140 bits (338), Expect = 8e-33
Identities = 63/81 (77%), Positives = 72/81 (88%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
IHSKVVRNRS++ R+ RTPP
Sbjct: 78 VIHSKVVRNRSREARKDRTPP 98
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN GRAK GRGHV+ +R
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIR 22
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 139 bits (337), Expect = 1e-32
Identities = 63/81 (77%), Positives = 72/81 (88%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
AIHSKVVRNRS++ R+ RTPP
Sbjct: 78 AIHSKVVRNRSREARKDRTPP 98
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN GRAK GRGHV+ +R
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIR 22
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 134 bits (324), Expect = 4e-31
Identities = 61/81 (75%), Positives = 70/81 (86%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+ + LPKL KLHYCVSC
Sbjct: 18 VQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLCVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
IHSKVVRNRS++ R+ RTPP
Sbjct: 78 VIHSKVVRNRSREARKDRTPP 98
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN RAK GRGHV+ +R
Sbjct: 1 MTKKRRNNVRAKKGRGHVQPIR 22
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 132 bits (320), Expect = 1e-30
Identities = 60/81 (74%), Positives = 69/81 (85%)
Frame = +2
Query: 137 LKP*ECTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 316
++P CTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+ + LPKLY KLHYCVSC
Sbjct: 18 VQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSC 77
Query: 317 AIHSKVVRNRSKKDRRIRTPP 379
AIHSKVVRNRS++ + RTPP
Sbjct: 78 AIHSKVVRNRSREACKDRTPP 98
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVKAVR 150
MT+KRRN AK GRGHV+ +R
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIR 22
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 68.5 bits (160), Expect = 3e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +2
Query: 269 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 379
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +2
Query: 197 KFVIRNIVEAAAVRDINDASVY 262
KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 37.1 bits (82), Expect = 0.084
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 85 MTRKRRNGGRAKHGRGHVK 141
MT+KRRN GRAK GRGHV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQ 19
>BC111705-1|AAI11706.1| 464|Homo sapiens NAPSB protein protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.59
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 327 AKLSGTDRRKTEESVLLPRVTSLGTCHVHRQCKGSDLLLNK*XNXKKKKKKKKXXXKXKK 506
A+ G D + E + R G H HR + + L N KKKKKKKK K KK
Sbjct: 397 ARPRGADLGRRETAQAQYRGCRPGDAHAHRVAELALLSKNPIFPLKKKKKKKKKKKKKKK 456
Query: 507 XK 512
K
Sbjct: 457 KK 458
>BC026291-1|AAH26291.1| 440|Homo sapiens SLC22A12 protein protein.
Length = 440
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +3
Query: 441 LNK*XNXKKKKKKKKXXXKXKKXK 512
LNK N KKKKKKKK K KK K
Sbjct: 383 LNKETNEKKKKKKKKKKKKKKKKK 406
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 420 CKGSDLLLNK*XNXKKKKKKKKXXXKXKKXK 512
C+G + N+ KKKKKKKK K KK K
Sbjct: 380 CEGLNKETNEKKKKKKKKKKKKKKKKKKKKK 410
>BC030534-1|AAH30534.1| 690|Homo sapiens CEP68 protein protein.
Length = 690
Score = 31.1 bits (67), Expect = 5.5
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +3
Query: 366 SVLLPRVTSLGTCHVHRQCKGSDLLLNK*XNXKKKKKKKKXXXKXKKXK 512
S L P+ T++ HVH K KKKKKKKK K KK K
Sbjct: 642 SCLFPQSTNIIIKHVHVDQALFMCQAKKKKKKKKKKKKKKKKKKKKKKK 690
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 350
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 447
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 46 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 89
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>BC028004-1|AAH28004.1| 621|Homo sapiens DMXL1 protein protein.
Length = 621
Score = 30.7 bits (66), Expect = 7.3
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +3
Query: 375 LPRVTSLGTCHVHRQCKGSDLLLNK*XNXKKKKKKKKXXXKXKKXK 512
L R TS+ H + S K KKKKKKKK K KK K
Sbjct: 569 LTRSTSMLISSGHNKSSNSKKKKKKKKKKKKKKKKKKKKKKKKKKK 614
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 287 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 412
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,298,835
Number of Sequences: 237096
Number of extensions: 1497446
Number of successful extensions: 4523
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3855
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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