Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_D21
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92834-4|CAB07387.1|  117|Caenorhabditis elegans Hypothetical pr...   134   8e-32
Z69634-3|CAA93454.4|  553|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z92834-4|CAB07387.1|  117|Caenorhabditis elegans Hypothetical
           protein F39B2.6 protein.
          Length = 117

 Score =  134 bits (324), Expect = 8e-32
 Identities = 59/76 (77%), Positives = 65/76 (85%)
 Frame = +2

Query: 152 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 331
           CTNC RC PKDKAIKKFV+RNIVEAAAVRDI DAS Y  + LPKLY KLHYC++CAIHSK
Sbjct: 23  CTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQYALPKLYHKLHYCIACAIHSK 82

Query: 332 VVRNRSKKDRRIRTPP 379
           VVRNRS++ RR R PP
Sbjct: 83  VVRNRSREARRDRNPP 98



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +1

Query: 85  MTRKRRNGGRAKHGRGHVKAVR 150
           MT KRRN GR K  RGHV  +R
Sbjct: 1   MTFKRRNHGRNKKNRGHVAFIR 22


>Z69634-3|CAA93454.4|  553|Caenorhabditis elegans Hypothetical
           protein B0001.5 protein.
          Length = 553

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 301 LLRVMRHPQQSCQEQIEERQKNPYSSQE*LP*GHVTSTGSAK 426
           ++ V + P +S   ++ + QKN Y+S E    GH TS+ +A+
Sbjct: 374 VINVYKEPSRSHANELYDSQKNQYTSHE----GHSTSSPTAE 411


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,233,658
Number of Sequences: 27780
Number of extensions: 232106
Number of successful extensions: 556
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)