Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_D19
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0177 + 1247937-1249067                                           33   0.39 
01_07_0312 + 42677752-42678561,42678701-42678910,42679597-426797...    30   2.1  
01_05_0808 - 25414486-25414677,25415114-25415290,25415839-254159...    30   2.1  
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724           29   3.7  
02_01_0377 + 2728892-2729187,2729483-2729544,2730516-2730570,273...    29   4.9  
01_05_0329 - 21037980-21038378,21038517-21038737,21038827-210389...    29   4.9  

>07_01_0177 + 1247937-1249067
          Length = 376

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 23/62 (37%), Positives = 30/62 (48%)
 Frame = +2

Query: 251 GSGAWSELAARHPDIAARLRQRPATWARKRRPSSNDATDDFGDNFSGFDRFPFDDIPPEF 430
           G+ A + L   HP +AAR R+R A  A     S  DA  D   + + F R   D IPP  
Sbjct: 19  GASAGAYLVYHHPAVAAR-RRRIARVA-SALASLADAVADVASDLAAFLRSDSDSIPPTV 76

Query: 431 RE 436
           R+
Sbjct: 77  RQ 78


>01_07_0312 +
           42677752-42678561,42678701-42678910,42679597-42679704,
           42679915-42680010,42680090-42680182,42680276-42680386,
           42680482-42680514,42680592-42680642,42680960-42681037,
           42681145-42681165
          Length = 536

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 474 ATNNHNSRRPLRQLNHSNKRPPHRLNRLRRTANTSS 581
           AT NH   RP +++  S ++PPH+L R +  A TSS
Sbjct: 35  ATENH---RP-KEIGPSGEKPPHKLLRAKGKAGTSS 66


>01_05_0808 -
           25414486-25414677,25415114-25415290,25415839-25415928,
           25416016-25416081,25416170-25416240,25416375-25416450,
           25416567-25420098,25421464-25421834
          Length = 1524

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +2

Query: 335 KRRPSSNDATDDFGDNFSGFDRF--PFDDIPPEFREHF 442
           +R+ SS DA   +GD F G  +F   FD +P ++ E F
Sbjct: 20  RRKASSTDAAAAYGDVFGGPPQFAVAFDGVPADYGEVF 57


>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
          Length = 574

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/65 (29%), Positives = 27/65 (41%)
 Frame = +2

Query: 563 HSEHEQQTQIPQYGLRNTVDLGQKSPADPSLVDADDRTHRSMSAPPDTPNQTKMSVHNHQ 742
           HS+ +     P   L  T+   Q+S   PS V   D TH+   APP   +Q   +   H 
Sbjct: 297 HSQVQSVPPAPPTPLAPTIP--QESYYPPSAVQPTDTTHQQYQAPPAPQSQAPPAPPQHY 354

Query: 743 EQTHQ 757
           +   Q
Sbjct: 355 QTPPQ 359


>02_01_0377 +
           2728892-2729187,2729483-2729544,2730516-2730570,
           2730784-2730858,2730980-2731054,2731155-2731202,
           2731548-2732357,2732450-2732498,2733157-2733266,
           2733381-2733488,2733920-2733980
          Length = 582

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 456 TAGSALATNNHNSRRPLRQLNHSNKRPPHRLNRLRRTANTSSKPRYHSTDS 608
           TAG+A  + N +   P    ++ NKR  H    L  T   S  P+ H   S
Sbjct: 209 TAGTASKSGNDSDGIPADDEDYHNKRRRHHRGPLEETELVSVAPKAHPVSS 259


>01_05_0329 -
           21037980-21038378,21038517-21038737,21038827-21038905,
           21039002-21039071,21039144-21039255,21039359-21039398,
           21039482-21039676,21039925-21040044,21040684-21041106,
           21042386-21042928
          Length = 733

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 620 DLGQKSPADPSLVDA-DDRTHRSMSAPPDTPNQTKMSVHNHQEQTH 754
           D+ +K  A  ++ D+ +D + R  S   + PN +K+  ++ ++Q H
Sbjct: 434 DIRKKEAAMQTITDSGEDNSRRPRSGDSEIPNSSKLEPYSSEQQRH 479


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,845,958
Number of Sequences: 37544
Number of extensions: 385074
Number of successful extensions: 1377
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)