Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_D13
(892 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 2.8
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 23 3.7
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 4.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.5
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 8.6
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 2.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 333 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQTPQT 440
+DEAE S+ G + QS I +VAR+ +T T
Sbjct: 272 SDEAEPSSTSKKSGIVRSHQQSCINRVARETKTAGT 307
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 90 GGHGSMFRQLLKKPKNLKE 34
G +MF Q+LKK +N K+
Sbjct: 61 GSPDAMFSQVLKKAENFKD 79
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 378 RHQYCQSWILQVARQRQTPQTTCHSKS 458
RH ++W+ R + TPQ+ S++
Sbjct: 241 RHLERKAWVASFGRPKMTPQSLLPSQT 267
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 333 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 428
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 333 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 428
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 333 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 428
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 333 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 428
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 333 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 428
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 333 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 428
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 333 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 428
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 333 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 428
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 325 VSEQTRLKYASAPDGKVPVI 384
V EQT A D KVP+I
Sbjct: 230 VKEQTLQSIEMAKDAKVPII 249
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,458
Number of Sequences: 438
Number of extensions: 2896
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -