Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_D11
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49829-10|AAA93389.2| 591|Caenorhabditis elegans Uncoordinated ... 358 3e-99
S66176-1|AAB28570.1| 591|Caenorhabditis elegans UNC-18 protein. 358 3e-99
U49829-9|AAQ81273.1| 673|Caenorhabditis elegans Uncoordinated p... 348 3e-96
S34207-1|AAB21818.1| 673|Caenorhabditis elegans unc-18 protein. 348 3e-96
AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical ... 184 1e-46
U49829-11|AAP40539.1| 93|Caenorhabditis elegans Uncoordinated ... 106 2e-23
Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical pr... 68 1e-11
Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical pr... 68 1e-11
M77697-6|AAA27901.2| 603|Caenorhabditis elegans Hypothetical pr... 38 0.007
U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine rece... 33 0.35
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 30 2.4
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 30 2.4
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 30 2.4
AF125971-3|AAN73292.1| 152|Caenorhabditis elegans Hypothetical ... 30 2.4
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 30 2.4
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 29 4.3
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical pr... 28 7.4
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 28 9.8
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 28 9.8
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 28 9.8
U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical pr... 28 9.8
U23182-2|ABD94105.1| 441|Caenorhabditis elegans Hypothetical pr... 28 9.8
U23182-1|ABD94104.1| 468|Caenorhabditis elegans Hypothetical pr... 28 9.8
>U49829-10|AAA93389.2| 591|Caenorhabditis elegans Uncoordinated
protein 18, isoform a protein.
Length = 591
Score = 358 bits (880), Expect = 3e-99
Identities = 169/266 (63%), Positives = 213/266 (80%)
Frame = +2
Query: 62 MALKALVGQKIMNEVIRYRGPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITL 241
M+LK +VG K++N+VIR P K R W VLIVD L+MRM+S+CCKMH+I EGIT+
Sbjct: 1 MSLKQIVGHKLLNDVIR---PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITI 57
Query: 242 VEDIHKKREPLCTMDGIYLITPSEKSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNE 421
VED++K+REPL T++ IYLI P+ +S+ LI D+ N +Y+ AHVFFTEAC D LF+
Sbjct: 58 VEDLNKRREPLPTLEAIYLIAPTAESIDKLIQDYCARN--LYKCAHVFFTEACSDQLFST 115
Query: 422 LSRSQIAKYIKTLKEINIAFIPYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIA 601
LS+S A++IKTLKEINIAF PYE QVF+LDSP+TF YN +N+ERIAEQIA
Sbjct: 116 LSKSAAARFIKTLKEINIAFTPYESQVFNLDSPDTFFLYYNAQKQGGLTSNLERIAEQIA 175
Query: 602 TLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPEKARSQLLVLDRGF 781
T+CATLGEYPS+RYR+D+ERNVEL L++QKLDAYKAD+P+MGEG +KARSQL+++DRG+
Sbjct: 176 TVCATLGEYPSLRYRADFERNVELGHLVEQKLDAYKADDPSMGEGADKARSQLIIIDRGY 235
Query: 782 DCVSPLLHELTLQAMAYDLLPIENDV 859
D ++PLLHELTLQAM YDLL IENDV
Sbjct: 236 DAITPLLHELTLQAMCYDLLGIENDV 261
>S66176-1|AAB28570.1| 591|Caenorhabditis elegans UNC-18 protein.
Length = 591
Score = 358 bits (880), Expect = 3e-99
Identities = 169/266 (63%), Positives = 213/266 (80%)
Frame = +2
Query: 62 MALKALVGQKIMNEVIRYRGPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITL 241
M+LK +VG K++N+VIR P K R W VLIVD L+MRM+S+CCKMH+I EGIT+
Sbjct: 1 MSLKQIVGHKLLNDVIR---PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITI 57
Query: 242 VEDIHKKREPLCTMDGIYLITPSEKSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNE 421
VED++K+REPL T++ IYLI P+ +S+ LI D+ N +Y+ AHVFFTEAC D LF+
Sbjct: 58 VEDLNKRREPLPTLEAIYLIAPTAESIDKLIQDYCARN--LYKCAHVFFTEACSDQLFST 115
Query: 422 LSRSQIAKYIKTLKEINIAFIPYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIA 601
LS+S A++IKTLKEINIAF PYE QVF+LDSP+TF YN +N+ERIAEQIA
Sbjct: 116 LSKSAAARFIKTLKEINIAFTPYESQVFNLDSPDTFFLYYNAQKQGGLTSNLERIAEQIA 175
Query: 602 TLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPEKARSQLLVLDRGF 781
T+CATLGEYPS+RYR+D+ERNVEL L++QKLDAYKAD+P+MGEG +KARSQL+++DRG+
Sbjct: 176 TVCATLGEYPSLRYRADFERNVELGHLVEQKLDAYKADDPSMGEGADKARSQLIIIDRGY 235
Query: 782 DCVSPLLHELTLQAMAYDLLPIENDV 859
D ++PLLHELTLQAM YDLL IENDV
Sbjct: 236 DAITPLLHELTLQAMCYDLLGIENDV 261
>U49829-9|AAQ81273.1| 673|Caenorhabditis elegans Uncoordinated
protein 18, isoform c protein.
Length = 673
Score = 348 bits (855), Expect = 3e-96
Identities = 164/258 (63%), Positives = 207/258 (80%)
Frame = +2
Query: 86 QKIMNEVIRYRGPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKR 265
+K++N+VIR P K R W VLIVD L+MRM+S+CCKMH+I EGIT+VED++K+R
Sbjct: 91 RKLLNDVIR---PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLNKRR 147
Query: 266 EPLCTMDGIYLITPSEKSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQIAK 445
EPL T++ IYLI P+ +S+ LI D+ N +Y+ AHVFFTEAC D LF+ LS+S A+
Sbjct: 148 EPLPTLEAIYLIAPTAESIDKLIQDYCARN--LYKCAHVFFTEACSDQLFSTLSKSAAAR 205
Query: 446 YIKTLKEINIAFIPYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGE 625
+IKTLKEINIAF PYE QVF+LDSP+TF YN +N+ERIAEQIAT+CATLGE
Sbjct: 206 FIKTLKEINIAFTPYESQVFNLDSPDTFFLYYNAQKQGGLTSNLERIAEQIATVCATLGE 265
Query: 626 YPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPEKARSQLLVLDRGFDCVSPLLH 805
YPS+RYR+D+ERNVEL L++QKLDAYKAD+P+MGEG +KARSQL+++DRG+D ++PLLH
Sbjct: 266 YPSLRYRADFERNVELGHLVEQKLDAYKADDPSMGEGADKARSQLIIIDRGYDAITPLLH 325
Query: 806 ELTLQAMAYDLLPIENDV 859
ELTLQAM YDLL IENDV
Sbjct: 326 ELTLQAMCYDLLGIENDV 343
>S34207-1|AAB21818.1| 673|Caenorhabditis elegans unc-18 protein.
Length = 673
Score = 348 bits (855), Expect = 3e-96
Identities = 164/258 (63%), Positives = 207/258 (80%)
Frame = +2
Query: 86 QKIMNEVIRYRGPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKR 265
+K++N+VIR P K R W VLIVD L+MRM+S+CCKMH+I EGIT+VED++K+R
Sbjct: 91 RKLLNDVIR---PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLNKRR 147
Query: 266 EPLCTMDGIYLITPSEKSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQIAK 445
EPL T++ IYLI P+ +S+ LI D+ N +Y+ AHVFFTEAC D LF+ LS+S A+
Sbjct: 148 EPLPTLEAIYLIAPTAESIDKLIQDYCARN--LYKCAHVFFTEACSDQLFSTLSKSAAAR 205
Query: 446 YIKTLKEINIAFIPYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGE 625
+IKTLKEINIAF PYE QVF+LDSP+TF YN +N+ERIAEQIAT+CATLGE
Sbjct: 206 FIKTLKEINIAFTPYESQVFNLDSPDTFFLYYNAQKQGGLTSNLERIAEQIATVCATLGE 265
Query: 626 YPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPEKARSQLLVLDRGFDCVSPLLH 805
YPS+RYR+D+ERNVEL L++QKLDAYKAD+P+MGEG +KARSQL+++DRG+D ++PLLH
Sbjct: 266 YPSLRYRADFERNVELGHLVEQKLDAYKADDPSMGEGADKARSQLIIIDRGYDAITPLLH 325
Query: 806 ELTLQAMAYDLLPIENDV 859
ELTLQAM YDLL IENDV
Sbjct: 326 ELTLQAMCYDLLGIENDV 343
>AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical
protein T07A9.10 protein.
Length = 562
Score = 184 bits (447), Expect = 1e-46
Identities = 103/268 (38%), Positives = 171/268 (63%), Gaps = 4/268 (1%)
Frame = +2
Query: 68 LKALVGQKIMNEVIRYRGPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVE 247
L+ LV ++I+ ++R + K R ++ VL++D+ +M +V++C ++++ EG+TLVE
Sbjct: 2 LRELVKKQIIENILRPQNYDSKLGHR-KFSVLVLDKSAMVVVNSCLSLNEVFEEGVTLVE 60
Query: 248 DIHKKREPLCTMDGIYLITPSEKSVHALINDFAVGNRI----MYRAAHVFFTEACPDILF 415
D+ + REP+ +MD IY+I+P +S+ LINDF+ + YR+AH+FF + C D LF
Sbjct: 61 DLTRNREPMPSMDAIYIISPVAESIDILINDFSRKTKFNPGNSYRSAHIFFLDPCCDELF 120
Query: 416 NELSRSQIAKYIKTLKEINIAFIPYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQ 595
+LS+S K+IKTLKE+N+ P E Q+F+++S Q R +M + A+
Sbjct: 121 EKLSKSPAVKWIKTLKELNLNLKPVESQIFTVNS-------------QFR-GDMTKTADG 166
Query: 596 IATLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPEKARSQLLVLDR 775
I +LCATL +P++R++SD+ ++ E+ Q ++QKL + + G G + ++L+VLDR
Sbjct: 167 IVSLCATLNIHPTLRFQSDFAQSSEICQRVEQKLKEFGNE----GMGTD---AELVVLDR 219
Query: 776 GFDCVSPLLHELTLQAMAYDLLPIENDV 859
FD VSPLLHE+TLQAM D+ ++ V
Sbjct: 220 SFDLVSPLLHEVTLQAMVVDVTAFKDGV 247
>U49829-11|AAP40539.1| 93|Caenorhabditis elegans Uncoordinated
protein 18, isoform b protein.
Length = 93
Score = 106 bits (255), Expect = 2e-23
Identities = 50/87 (57%), Positives = 67/87 (77%)
Frame = +2
Query: 62 MALKALVGQKIMNEVIRYRGPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITL 241
M+LK +VG K++N+VIR P K R W VLIVD L+MRM+S+CCKMH+I EGIT+
Sbjct: 1 MSLKQIVGHKLLNDVIR---PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITI 57
Query: 242 VEDIHKKREPLCTMDGIYLITPSEKSV 322
VED++K+REPL T++ IYLI P+ +SV
Sbjct: 58 VEDLNKRREPLPTLEAIYLIAPTAESV 84
>Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical
protein F43D9.3b protein.
Length = 689
Score = 67.7 bits (158), Expect = 1e-11
Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 20/257 (7%)
Frame = +2
Query: 152 WRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHAL 331
W+VL++D+ ++S + + G+TL I +REPL + +Y ++P+++++ +
Sbjct: 64 WKVLVLDRTGQDIISPLLPVKQLRELGVTLHLLIGARREPLTDVPAVYFVSPNDENIDLM 123
Query: 332 INDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQI----AKYIKTLKEINIAFIPYEQQ 499
D + MY + + F L+ + + ++ + + + FI E
Sbjct: 124 SEDL---KKAMYDSFYCNFISPLARPRLESLASAAVHGGAVSQVQKVVDQYLNFISLEDD 180
Query: 500 VFSL-----DSPETFQCMYNPALAQTR-NANMERIAEQIATLCATLGEYPSVRYRSDWER 661
+F L +S ++ M +P + NA ++ IA+ + +CAT+G P +R
Sbjct: 181 LFVLRRYSENSTFSYHAMNSPGTSDVAVNAMLDSIADGLFAVCATMGIVPIIRCPKGNAA 240
Query: 662 NVELAQLIQQKL---------DAYKADEPTMGEGPEKARSQLLVLDRGFDCVSPLLHELT 814
+ +A+ + QKL + + D MG + +R L++ DR D + L H T
Sbjct: 241 EM-VAKKLDQKLRDNLRDSRNNLFTMDGVRMGL-LQTSRPLLVIGDRSADLATMLHHTWT 298
Query: 815 LQAMAYDLLPI-ENDVT 862
QA+ +D+L + +N VT
Sbjct: 299 YQALMHDVLELDQNRVT 315
>Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical
protein F43D9.3a protein.
Length = 707
Score = 67.7 bits (158), Expect = 1e-11
Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 20/257 (7%)
Frame = +2
Query: 152 WRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHAL 331
W+VL++D+ ++S + + G+TL I +REPL + +Y ++P+++++ +
Sbjct: 64 WKVLVLDRTGQDIISPLLPVKQLRELGVTLHLLIGARREPLTDVPAVYFVSPNDENIDLM 123
Query: 332 INDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQI----AKYIKTLKEINIAFIPYEQQ 499
D + MY + + F L+ + + ++ + + + FI E
Sbjct: 124 SEDL---KKAMYDSFYCNFISPLARPRLESLASAAVHGGAVSQVQKVVDQYLNFISLEDD 180
Query: 500 VFSL-----DSPETFQCMYNPALAQTR-NANMERIAEQIATLCATLGEYPSVRYRSDWER 661
+F L +S ++ M +P + NA ++ IA+ + +CAT+G P +R
Sbjct: 181 LFVLRRYSENSTFSYHAMNSPGTSDVAVNAMLDSIADGLFAVCATMGIVPIIRCPKGNAA 240
Query: 662 NVELAQLIQQKL---------DAYKADEPTMGEGPEKARSQLLVLDRGFDCVSPLLHELT 814
+ +A+ + QKL + + D MG + +R L++ DR D + L H T
Sbjct: 241 EM-VAKKLDQKLRDNLRDSRNNLFTMDGVRMGL-LQTSRPLLVIGDRSADLATMLHHTWT 298
Query: 815 LQAMAYDLLPI-ENDVT 862
QA+ +D+L + +N VT
Sbjct: 299 YQALMHDVLELDQNRVT 315
>M77697-6|AAA27901.2| 603|Caenorhabditis elegans Hypothetical
protein B0303.9 protein.
Length = 603
Score = 38.3 bits (85), Expect = 0.007
Identities = 46/239 (19%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Frame = +2
Query: 170 DQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHAL---IND 340
D+ M V+ ++A G+ I K+ T ++ + P+ S+ L I++
Sbjct: 51 DRSVMHRVNLFAGASVLAAHGVVANHSIETKKSA-STPHVVFFLAPTMVSLDLLCDYIDN 109
Query: 341 FAVGNRIMYRAAHVFFTEACPDILFNELSRSQIAKY---IKTLKEINIAFIPYEQQVFSL 511
++I+Y+ VFF ++ L KY ++++KEI + ++P + + SL
Sbjct: 110 VRNDSKILYQ---VFFIPEAWFVVRESLKTRAEGKYWERLESVKEIPLCWLPRDGECLSL 166
Query: 512 DSPE-TFQCMYNPALAQTRN--ANMERIAEQIATLCATLGEYP-SVRYRSDWERNVELAQ 679
SP+ + + N + ++ + ++ + P S+ + W +V A+
Sbjct: 167 SSPQIAARLLINGDWTHLHKCAVALNQLIDMCRGRSSSSNQRPMSIYAKGKWASDV--AK 224
Query: 680 LIQQKLDAYKADEPTMGEGPEKAR---SQLLVLDRGFDCVSPLLHELTLQAMAYDLLPI 847
++ + ++ +AD T P + ++++++DR D ++P+L +LT + ++ I
Sbjct: 225 MMGKIRNSAEADSMTKNLDPIEGLLKINRIVLIDRWMDPLTPMLSQLTFYGLLDEIYGI 283
>U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 3 protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.35
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +3
Query: 204 AKCMIYLLKELPWL--RTFTRNVNLYAPWMV--FTSLLRLRNQCML*SMTLL--SVTASC 365
A C+ Y + + W+ R F RN + Y + V FTS+L + N+ + L + S
Sbjct: 29 AICINYRILYVIWVSQRHFYRNQSFYNLYSVDCFTSVLAMSNELIFTRSFLYFPQLCVSF 88
Query: 366 TELLMFSSLKLVLIFCLMSYPVAK*PNI 449
+E++ S + + + +CL+SY +A P I
Sbjct: 89 SEIVKNSPVFMRIYYCLLSYLIAIKPVI 116
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical
protein B0207.5 protein.
Length = 3279
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 332 INDFAVGNRIMY-RAAHVFFT-EACPDILFNELSRSQIAKYIK 454
+N+ + + Y R + +T ++C DI+ NELSR + KY+K
Sbjct: 636 VNELSEQEYLQYKRRCRIDYTHKSCKDIVLNELSREEYKKYLK 678
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 29.9 bits (64), Expect = 2.4
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = +2
Query: 311 EKSVHALINDFAVGNRIMYRAAHVF-FTEACPD-ILFNELSRSQIAKYIKTLKEINIAFI 484
E+ + I + + Y V+ FT + D FN L S K I K ++ I
Sbjct: 128 EEKLSEAIKQWCIEVMKSYEEIDVYDFTSSFRDGHAFNYLIHSYDRKLINLTKTAEMSAI 187
Query: 485 PYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERN 664
+ F++ + +T+ P L ++ + +++ + + LC + Y ++ S E
Sbjct: 188 DRIENAFAV-AEKTWNV---PRLLNPKDLHSDQL-DSHSVLCYLMSLYLAMISTSKIETE 242
Query: 665 VELAQLIQQKLDAYKADEPTMGEGPEKARSQLL 763
+E Q+ QQK+ A A + P + S L
Sbjct: 243 LEAQQIQQQKVAALLASHKMLSSQPSTSSSSAL 275
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 29.9 bits (64), Expect = 2.4
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = +2
Query: 311 EKSVHALINDFAVGNRIMYRAAHVF-FTEACPD-ILFNELSRSQIAKYIKTLKEINIAFI 484
E+ + I + + Y V+ FT + D FN L S K I K ++ I
Sbjct: 128 EEKLSEAIKQWCIEVMKSYEEIDVYDFTSSFRDGHAFNYLIHSYDRKLINLTKTAEMSAI 187
Query: 485 PYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERN 664
+ F++ + +T+ P L ++ + +++ + + LC + Y ++ S E
Sbjct: 188 DRIENAFAV-AEKTWNV---PRLLNPKDLHSDQL-DSHSVLCYLMSLYLAMISTSKIETE 242
Query: 665 VELAQLIQQKLDAYKADEPTMGEGPEKARSQLL 763
+E Q+ QQK+ A A + P + S L
Sbjct: 243 LEAQQIQQQKVAALLASHKMLSSQPSTSSSSAL 275
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 125 KGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDG 289
KGKE ARI VD+ + SA +G+ VE+ H++ +C DG
Sbjct: 223 KGKEEARINRAAAKVDKRKAALESARASKRARKEQGV--VEENHQENCEVCNQDG 275
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 125 KGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDG 289
KGKE ARI VD+ + SA +G+ VE+ H++ +C DG
Sbjct: 223 KGKEEARINRAAAKVDKRKAALESARASKRARKEQGV--VEENHQENCEVCNQDG 275
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.9 bits (64), Expect = 2.4
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = +2
Query: 311 EKSVHALINDFAVGNRIMYRAAHVF-FTEACPD-ILFNELSRSQIAKYIKTLKEINIAFI 484
E+ + I + + Y V+ FT + D FN L S K I K ++ I
Sbjct: 128 EEKLSEAIKQWCIEVMKSYEEIDVYDFTSSFRDGHAFNYLIHSYDRKLINLTKTAEMSAI 187
Query: 485 PYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERN 664
+ F++ + +T+ P L ++ + +++ + + LC + Y ++ S E
Sbjct: 188 DRIENAFAV-AEKTWNV---PRLLNPKDLHSDQL-DSHSVLCYLMSLYLAMISTSKIETE 242
Query: 665 VELAQLIQQKLDAYKADEPTMGEGPEKARSQLL 763
+E Q+ QQK+ A A + P + S L
Sbjct: 243 LEAQQIQQQKVAALLASHKMLSSQPSTSSSSAL 275
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 125 KGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDG 289
KGKE ARI VD+ + SA +G+ VE+ H++ +C DG
Sbjct: 223 KGKEEARINRAAAKVDKRKAALESARASKRARKEQGV--VEENHQENCEVCNQDG 275
>AF125971-3|AAN73292.1| 152|Caenorhabditis elegans Hypothetical
protein Y4C6B.4b protein.
Length = 152
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 152 WRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEK 316
+R++IV M +VS C I+ I + +D+ + E T+ IY TP+EK
Sbjct: 9 FRIIIVLLSFMCLVSVCSNYIIINFTFICMKDDLSQTTEVNGTLKSIYDYTPTEK 63
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 152 WRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEK 316
+R++IV M +VS C I+ I + +D+ + E T+ IY TP+EK
Sbjct: 9 FRIIIVLLSFMCLVSVCSNYIIINFTFICMKDDLSQTTEVNGTLKSIYDYTPTEK 63
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 644 RSDWERNVELAQLIQQKLDAYKAD--EPTMGEGPEKARSQLLVLD 772
R+D ER +EL + ++ +D YK+ E G P+ ++QL L+
Sbjct: 126 RTDIERAIELTKKARELVDLYKSSFKESEPGGAPKVRKAQLFTLE 170
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical
protein F42E11.1 protein.
Length = 1266
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 65 ALKALVGQKIMNEVIRYRGPKGKESARIEWRVLIVDQLS 181
AL ++ Q + + ++YRGPK ESA IE ++ + +S
Sbjct: 858 ALLLVIAQSAVAQYLKYRGPKDMESA-IEASRIVTESIS 895
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 686 GLVELTQHCVPNHCGIERKDIRRAWHRGSRFVQQ 585
G V L +HC+ + R +++ HRGS F+ Q
Sbjct: 797 GTVALLRHCLQQNTDEARMNLQFVLHRGSTFLSQ 830
>Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical
protein C26C6.4b protein.
Length = 341
Score = 28.3 bits (60), Expect = 7.4
Identities = 26/94 (27%), Positives = 39/94 (41%)
Frame = +2
Query: 572 NMERIAEQIATLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPEKAR 751
N+E I ++ L A + PS + N+ + LD+ K P E
Sbjct: 54 NLEFIPGALSRLVAISFDTPSHLILKEKYPNIPSVVI---NLDSIKKTLPESYENRRYII 110
Query: 752 SQLLVLDRGFDCVSPLLHELTLQAMAYDLLPIEN 853
QL++L R C S L ++ AM D L +EN
Sbjct: 111 YQLVLLTRARICASLALRGISFWAMQQDTLWVEN 144
>Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical
protein C26C6.4a protein.
Length = 424
Score = 28.3 bits (60), Expect = 7.4
Identities = 26/94 (27%), Positives = 39/94 (41%)
Frame = +2
Query: 572 NMERIAEQIATLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPEKAR 751
N+E I ++ L A + PS + N+ + LD+ K P E
Sbjct: 137 NLEFIPGALSRLVAISFDTPSHLILKEKYPNIPSVVI---NLDSIKKTLPESYENRRYII 193
Query: 752 SQLLVLDRGFDCVSPLLHELTLQAMAYDLLPIEN 853
QL++L R C S L ++ AM D L +EN
Sbjct: 194 YQLVLLTRARICASLALRGISFWAMQQDTLWVEN 227
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 403 RTSFSEENMSS-SVHDAVTDSKVIDQSMH*FLRRSN 299
+ F EEN+ + + HD + + +D+ M FL+ S+
Sbjct: 1027 KPKFVEENLQTQNTHDGIKEQSAVDEEMPLFLKNSD 1062
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 403 RTSFSEENMSS-SVHDAVTDSKVIDQSMH*FLRRSN 299
+ F EEN+ + + HD + + +D+ M FL+ S+
Sbjct: 1027 KPKFVEENLQTQNTHDGIKEQSAVDEEMPLFLKNSD 1062
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 403 RTSFSEENMSS-SVHDAVTDSKVIDQSMH*FLRRSN 299
+ F EEN+ + + HD + + +D+ M FL+ S+
Sbjct: 1027 KPKFVEENLQTQNTHDGIKEQSAVDEEMPLFLKNSD 1062
>U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical
protein F52C9.5 protein.
Length = 618
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 713 QPYKHQVSVGLVELTQHCVPNHCGI 639
QPY+ + S GL+ HC+ + G+
Sbjct: 148 QPYERRSSTGLIHCKSHCLNSQIGV 172
>U23182-2|ABD94105.1| 441|Caenorhabditis elegans Hypothetical
protein F40B5.2b protein.
Length = 441
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +2
Query: 239 LVEDIHKKREPLCTM---DGIYLITPSEKSVHALINDF 343
LV D H EPLC + G+Y T + + +H + ++
Sbjct: 252 LVRDFHGAAEPLCNLKAPGGVYFATGNHEYMHGNVTEW 289
>U23182-1|ABD94104.1| 468|Caenorhabditis elegans Hypothetical
protein F40B5.2a protein.
Length = 468
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +2
Query: 239 LVEDIHKKREPLCTM---DGIYLITPSEKSVHALINDF 343
LV D H EPLC + G+Y T + + +H + ++
Sbjct: 279 LVRDFHGAAEPLCNLKAPGGVYFATGNHEYMHGNVTEW 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,919,837
Number of Sequences: 27780
Number of extensions: 387756
Number of successful extensions: 902
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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