Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_D10
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1556 - 27852247-27852738,27853005-27853197,27854006-278540...    30   2.9  
01_06_1044 + 34082801-34084339                                         29   3.8  
12_02_0512 - 19889845-19890468,19890958-19891413,19891727-19892215     29   5.0  
07_03_0556 + 19438394-19438537,19438638-19438747,19442018-194422...    29   5.0  
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456...    29   6.6  

>08_02_1556 -
           27852247-27852738,27853005-27853197,27854006-27854070,
           27854161-27854199,27854572-27854592,27854819-27855052,
           27855420-27855504,27855953-27856026,27856516-27856647,
           27856735-27856834,27857296-27857361,27857472-27857509,
           27858013-27858219,27858378-27858427,27858871-27858940,
           27859065-27859133,27859456-27859530,27860456-27860530,
           27860887-27860934
          Length = 710

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 567 VFFVIPRERDCHEMHQTLLRLSQPVHIDELYCF 665
           VF  +P+ +  +E+   L R S+P H+ +LY F
Sbjct: 120 VFDFLPKTKQKNEVFDALRRYSKPTHLWDLYAF 152


>01_06_1044 + 34082801-34084339
          Length = 512

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
 Frame = +3

Query: 564 SVFFVIPRERDCHEMHQTL---LRLSQPVHIDELYCFHYKSTPDDLPKSAGW 710
           S  F     RD H +H  +   +RL  PVH+D   C      PD      GW
Sbjct: 354 SATFSFDELRDMHYLHAAITESMRLYPPVHLDTHSCKEDDFLPDGTFVGKGW 405


>12_02_0512 - 19889845-19890468,19890958-19891413,19891727-19892215
          Length = 522

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 753 LMINGFCARRIKIMSYATHIQVKCMCPHVRRRRGPSAA 866
           LM+    ARR+K   YA H QV+ +   +RR  G   A
Sbjct: 143 LMVELLSARRVKAAWYARHEQVEKLLSTLRRAEGKPVA 180


>07_03_0556 +
           19438394-19438537,19438638-19438747,19442018-19442288,
           19442398-19442504,19442625-19443017,19443326-19443700,
           19443799-19443877,19444745-19444957
          Length = 563

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 47  GKQRTSINGL*QVNTKPPLNINLLFEVNGNLSL 145
           GKQR S+NG+  VN   PL +   +++ G  S+
Sbjct: 380 GKQRYSVNGVSHVNPDTPLKVADYYKIAGVFSV 412


>02_01_0611 -
           4567839-4568144,4568280-4569209,4569301-4569566,
           4569662-4569970,4570497-4570647,4570958-4571012,
           4571137-4571512,4571560-4571797,4571878-4572096,
           4572629-4572910
          Length = 1043

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 738 CIRFVCRRNSNRPILVG 688
           CI+ +CRR  N P+++G
Sbjct: 344 CIQILCRRTKNNPVIIG 360


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,328,592
Number of Sequences: 37544
Number of extensions: 515895
Number of successful extensions: 1192
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)