Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_D10
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical p... 87 2e-17
Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical pr... 81 8e-16
AY313177-1|AAP79302.1| 676|Caenorhabditis elegans myotubularin-... 81 8e-16
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 79 4e-15
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 79 4e-15
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical pr... 33 0.36
AY313178-1|AAP79303.1| 569|Caenorhabditis elegans myotubularin-... 33 0.36
AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin ... 33 0.36
AC024770-4|AAT68891.1| 521|Caenorhabditis elegans Mtm (myotubul... 33 0.36
AC024770-3|AAK84604.1| 569|Caenorhabditis elegans Mtm (myotubul... 33 0.36
AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm (myotubu... 32 0.48
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 31 0.84
U64846-9|AAG24117.3| 343|Caenorhabditis elegans Serpentine rece... 26 5.4
U64846-10|AAW88397.1| 341|Caenorhabditis elegans Serpentine rec... 26 5.4
Z81484-7|CAE11296.1| 221|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical
protein F53A2.8c protein.
Length = 674
Score = 86.6 bits (205), Expect = 2e-17
Identities = 45/132 (34%), Positives = 76/132 (57%)
Frame = +3
Query: 339 DINITPKLENVQLLDKYNLRNPSKGTLYFATTHLIFVDHEMRKETWILLMHISTVERLPI 518
DI I+ K++ V L+D+ + GT++ TTH+IF KE W+ IS+VE+ +
Sbjct: 5 DIGIS-KVDKVCLVDRLGCQENLVGTVHVTTTHIIFRAENGSKELWLATGLISSVEKGTL 63
Query: 519 TTAGSPLLVRTKTFQSVFFVIPRERDCHEMHQTLLRLSQPVHIDELYCFHYKSTPDDLPK 698
T AG L++R K FQ + +I R++ C ++++TL R ++PV++ EL F + +D+
Sbjct: 64 TAAGCMLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVNVTELLAFENREPVEDV-- 121
Query: 699 SAGWNFFDIQTE 734
GW D +E
Sbjct: 122 -RGWRRLDWNSE 132
Score = 58.0 bits (134), Expect = 8e-09
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2
Query: 728 NRIQRMNVPNDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGRL 892
+ + R + QW N+ Y +CDTYP++++ P AST+ LGS FRSRGRL
Sbjct: 131 SEMTRQGITKSQWTESNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRGRL 185
>Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical
protein F53A2.8a protein.
Length = 676
Score = 81.4 bits (192), Expect = 8e-16
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Frame = +3
Query: 339 DINITPKLENVQLLDKYNLRNPSKGTLYFATTHLIFVDHEMRKETWILLMHISTVERLPI 518
DI I+ K++ V L+D+ + GT++ TTH+IF KE W+ IS+VE+ +
Sbjct: 5 DIGIS-KVDKVCLVDRLGCQENLVGTVHVTTTHIIFRAENGSKELWLATGLISSVEKGTL 63
Query: 519 TTAGSPLLVRTKTFQSVFFVIPRERDCHEMHQTLLRLSQP--VHIDELYCFHYKSTPDDL 692
T AG L++R K FQ + +I R++ C ++++TL R ++P V++ EL F + +D+
Sbjct: 64 TAAGCMLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVNVTELLAFENREPVEDV 123
Query: 693 PKSAGWNFFDIQTE 734
GW D +E
Sbjct: 124 ---RGWRRLDWNSE 134
Score = 58.0 bits (134), Expect = 8e-09
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2
Query: 728 NRIQRMNVPNDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGRL 892
+ + R + QW N+ Y +CDTYP++++ P AST+ LGS FRSRGRL
Sbjct: 133 SEMTRQGITKSQWTESNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRGRL 187
>AY313177-1|AAP79302.1| 676|Caenorhabditis elegans
myotubularin-related protein MTM-6A protein.
Length = 676
Score = 81.4 bits (192), Expect = 8e-16
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Frame = +3
Query: 339 DINITPKLENVQLLDKYNLRNPSKGTLYFATTHLIFVDHEMRKETWILLMHISTVERLPI 518
DI I+ K++ V L+D+ + GT++ TTH+IF KE W+ IS+VE+ +
Sbjct: 5 DIGIS-KVDKVCLVDRLGCQENLVGTVHVTTTHIIFRAENGSKELWLATGLISSVEKGTL 63
Query: 519 TTAGSPLLVRTKTFQSVFFVIPRERDCHEMHQTLLRLSQP--VHIDELYCFHYKSTPDDL 692
T AG L++R K FQ + +I R++ C ++++TL R ++P V++ EL F + +D+
Sbjct: 64 TAAGCMLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVNVTELLAFENREPVEDV 123
Query: 693 PKSAGWNFFDIQTE 734
GW D +E
Sbjct: 124 ---RGWRRLDWNSE 134
Score = 58.0 bits (134), Expect = 8e-09
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2
Query: 728 NRIQRMNVPNDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGRL 892
+ + R + QW N+ Y +CDTYP++++ P AST+ LGS FRSRGRL
Sbjct: 133 SEMTRQGITKSQWTESNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRGRL 187
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 79.0 bits (186), Expect = 4e-15
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Frame = +3
Query: 339 DINITPKLENVQLLDKYNLRNPSKGTLYFATTHLIFVDHEMRKETWILLMHISTVERLPI 518
D I ++ V L+D+ + GT++ TTH+IF KE W+ IS+VE+ +
Sbjct: 110 DGRIAMMVDKVCLVDRLGCQENLVGTVHVTTTHIIFRAENGSKELWLATGLISSVEKGTL 169
Query: 519 TTAGSPLLVRTKTFQSVFFVIPRERDCHEMHQTLLRLSQP--VHIDELYCFHYKSTPDDL 692
T AG L++R K FQ + +I R++ C ++++TL R ++P V++ EL F + +D+
Sbjct: 170 TAAGCMLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVNVTELLAFENREPVEDV 229
Query: 693 PKSAGWNFFDIQTE 734
GW D +E
Sbjct: 230 ---RGWRRLDWNSE 240
Score = 58.0 bits (134), Expect = 8e-09
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2
Query: 728 NRIQRMNVPNDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGRL 892
+ + R + QW N+ Y +CDTYP++++ P AST+ LGS FRSRGRL
Sbjct: 239 SEMTRQGITKSQWTESNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRGRL 293
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 79.0 bits (186), Expect = 4e-15
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Frame = +3
Query: 339 DINITPKLENVQLLDKYNLRNPSKGTLYFATTHLIFVDHEMRKETWILLMHISTVERLPI 518
D I ++ V L+D+ + GT++ TTH+IF KE W+ IS+VE+ +
Sbjct: 110 DGRIAMMVDKVCLVDRLGCQENLVGTVHVTTTHIIFRAENGSKELWLATGLISSVEKGTL 169
Query: 519 TTAGSPLLVRTKTFQSVFFVIPRERDCHEMHQTLLRLSQP--VHIDELYCFHYKSTPDDL 692
T AG L++R K FQ + +I R++ C ++++TL R ++P V++ EL F + +D+
Sbjct: 170 TAAGCMLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVNVTELLAFENREPVEDV 229
Query: 693 PKSAGWNFFDIQTE 734
GW D +E
Sbjct: 230 ---RGWRRLDWNSE 240
Score = 58.0 bits (134), Expect = 8e-09
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2
Query: 728 NRIQRMNVPNDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGRL 892
+ + R + QW N+ Y +CDTYP++++ P AST+ LGS FRSRGRL
Sbjct: 239 SEMTRQGITKSQWTESNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRGRL 293
>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
protein T24A11.1b protein.
Length = 1006
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 755 NDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGR 889
++ + + + N+++E+C TYP ++ VP + A +RS GR
Sbjct: 265 SEHFQISSVNENFEVCPTYPEKIIVPKGITDDDIRKGAPYRSIGR 309
>Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical
protein T24A11.1a protein.
Length = 938
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 755 NDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGR 889
++ + + + N+++E+C TYP ++ VP + A +RS GR
Sbjct: 261 SEHFQISSVNENFEVCPTYPEKIIVPKGITDDDIRKGAPYRSIGR 305
>AY313178-1|AAP79303.1| 569|Caenorhabditis elegans
myotubularin-related protein MTM-9 protein.
Length = 569
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 740 RMNVPNDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGR 889
R+ + D + + + N+++ +C TYP ++ VP SA+FR GR
Sbjct: 146 RLMLSTDAFRISSVNENFAICPTYPEKLIVPKGIGDDYLKISATFREGGR 195
>AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin
homologous protein 1 protein.
Length = 930
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 755 NDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGR 889
++ + + + N+++E+C TYP ++ VP + A +RS GR
Sbjct: 265 SEHFQISSVNENFEVCPTYPEKIIVPKGITDDDIRKGAPYRSIGR 309
>AC024770-4|AAT68891.1| 521|Caenorhabditis elegans Mtm
(myotubularin) family protein9, isoform b protein.
Length = 521
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 740 RMNVPNDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGR 889
R+ + D + + + N+++ +C TYP ++ VP SA+FR GR
Sbjct: 98 RLMLSTDAFRISSVNENFAICPTYPEKLIVPKGIGDDYLKISATFREGGR 147
>AC024770-3|AAK84604.1| 569|Caenorhabditis elegans Mtm
(myotubularin) family protein9, isoform a protein.
Length = 569
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 740 RMNVPNDQWVLCTANKDYELCDTYPSEVYVPARASTAGPLGSASFRSRGR 889
R+ + D + + + N+++ +C TYP ++ VP SA+FR GR
Sbjct: 146 RLMLSTDAFRISSVNENFAICPTYPEKLIVPKGIGDDYLKISATFREGGR 195
>AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm
(myotubularin) family protein 1 protein.
Length = 588
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +2
Query: 737 QRMNVPNDQ-WVLCTANKDYELCDTYPSEVYVPARASTAG-PLGS--ASFRSRGRL 892
+R+ +PN + W NKDY+ +TYP +P + G P FRS+ R+
Sbjct: 175 ERLGIPNSRLWKEVDINKDYKFSETYPRTFVIPTVSWEEGKPFVKKLGEFRSKERI 230
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 615 TLLRLSQPVHIDELYCFHYKSTPDDLPKSAGWNFFDIQT 731
T+ LS P+HI YC +K TP ++ S W+ F++QT
Sbjct: 28 TIGLLSTPIHIFGGYCILFK-TPKEM-SSVKWSLFNLQT 64
>U64846-9|AAG24117.3| 343|Caenorhabditis elegans Serpentine
receptor, class h protein193 protein.
Length = 343
Score = 25.8 bits (54), Expect(2) = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 627 LSQPVHIDELYCFHYKSTPDDLPKSAGWNFFDIQT 731
+S P+H LYC YK TP+ + K+ W F + +
Sbjct: 28 VSIPIHCLGLYCIIYK-TPERM-KTVKWYLFALHS 60
Score = 21.4 bits (43), Expect(2) = 5.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 480 LLMHISTVERLPITTAG 530
LLMHI T+ +PI G
Sbjct: 20 LLMHIVTIVSIPIHCLG 36
>U64846-10|AAW88397.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein194, isoform b protein.
Length = 341
Score = 25.8 bits (54), Expect(2) = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 627 LSQPVHIDELYCFHYKSTPDDLPKSAGWNFFDIQT 731
+S P+H LYC YK TP+ + K+ W F + +
Sbjct: 28 VSIPIHCLGLYCIIYK-TPERM-KTVKWYLFALHS 60
Score = 21.4 bits (43), Expect(2) = 5.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 480 LLMHISTVERLPITTAG 530
LLMHI T+ +PI G
Sbjct: 20 LLMHIVTIVSIPIHCLG 36
>Z81484-7|CAE11296.1| 221|Caenorhabditis elegans Hypothetical
protein C47A10.7 protein.
Length = 221
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 627 LSQPVHIDELYCFHYKSTPDDLPKSAGWNFFDI 725
+S PVH+ YC +K TP ++ KS W+ F++
Sbjct: 22 ISLPVHLFGCYCILFK-TP-EVMKSVKWSLFNV 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,443,282
Number of Sequences: 27780
Number of extensions: 479325
Number of successful extensions: 1081
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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