Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_D02
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81049-1|CAB61001.2| 503|Caenorhabditis elegans Hypothetical pr... 82 4e-16
L29052-1|AAA27982.2| 503|Caenorhabditis elegans cell death prot... 82 4e-16
AF210702-1|AAG42045.1| 503|Caenorhabditis elegans caspase CED-3... 82 4e-16
Z93393-11|CAB07698.2| 536|Caenorhabditis elegans Hypothetical p... 77 2e-14
AF088285-1|AAC98292.1| 536|Caenorhabditis elegans caspase-relat... 77 2e-14
Z93393-12|CAD18879.1| 268|Caenorhabditis elegans Hypothetical p... 76 3e-14
AF088286-1|AAC98293.1| 268|Caenorhabditis elegans caspase-relat... 76 3e-14
Z93393-13|CAD18880.1| 149|Caenorhabditis elegans Hypothetical p... 75 7e-14
AF088287-1|AAC98294.1| 149|Caenorhabditis elegans caspase-relat... 75 7e-14
AF088289-1|AAC98296.1| 263|Caenorhabditis elegans caspase-relat... 70 2e-12
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 70 2e-12
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 70 2e-12
AF077542-10|AAC26297.1| 177|Caenorhabditis elegans Hypothetical... 34 0.15
Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical pr... 32 0.61
AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical ... 30 1.9
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 30 2.5
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical ... 29 3.3
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 28 7.5
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 28 7.5
>Z81049-1|CAB61001.2| 503|Caenorhabditis elegans Hypothetical
protein C48D1.2 protein.
Length = 503
Score = 82.2 bits (194), Expect = 4e-16
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +2
Query: 374 RGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGFSVTVLHNLRAEDINRYIQQIS 553
RGM +I N+EHFE + +R GT D D+L+ + R +G++V NL + I+ +
Sbjct: 242 RGMCLIINNEHFE--QMPTRNGTKADKDNLTNLFRCMGYTVICKDNLTGRGMLLTIRDFA 299
Query: 554 EMDHTDNDCLLVAVLSHGELGMLYA-KDTHYKPDNLWYYFTADKCPTLAGKPKLFFIQAC 730
+ + + +LV +LSHGE ++ D ++ A P LA KPK+ F+QAC
Sbjct: 300 KHESHGDSAILV-ILSHGEENVIIGVDDIPISTHEIYDLLNAANAPRLANKPKIVFVQAC 358
Query: 731 QGDKLDGG 754
+G++ D G
Sbjct: 359 RGERRDNG 366
>L29052-1|AAA27982.2| 503|Caenorhabditis elegans cell death protein
protein.
Length = 503
Score = 82.2 bits (194), Expect = 4e-16
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +2
Query: 374 RGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGFSVTVLHNLRAEDINRYIQQIS 553
RGM +I N+EHFE + +R GT D D+L+ + R +G++V NL + I+ +
Sbjct: 242 RGMCLIINNEHFE--QMPTRNGTKADKDNLTNLFRCMGYTVICKDNLTGRGMLLTIRDFA 299
Query: 554 EMDHTDNDCLLVAVLSHGELGMLYA-KDTHYKPDNLWYYFTADKCPTLAGKPKLFFIQAC 730
+ + + +LV +LSHGE ++ D ++ A P LA KPK+ F+QAC
Sbjct: 300 KHESHGDSAILV-ILSHGEENVIIGVDDIPISTHEIYDLLNAANAPRLANKPKIVFVQAC 358
Query: 731 QGDKLDGG 754
+G++ D G
Sbjct: 359 RGERRDNG 366
>AF210702-1|AAG42045.1| 503|Caenorhabditis elegans caspase CED-3
protein.
Length = 503
Score = 82.2 bits (194), Expect = 4e-16
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +2
Query: 374 RGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGFSVTVLHNLRAEDINRYIQQIS 553
RGM +I N+EHFE + +R GT D D+L+ + R +G++V NL + I+ +
Sbjct: 242 RGMCLIINNEHFE--QMPTRNGTKADKDNLTNLFRCMGYTVICKDNLTGRGMLLTIRDFA 299
Query: 554 EMDHTDNDCLLVAVLSHGELGMLYA-KDTHYKPDNLWYYFTADKCPTLAGKPKLFFIQAC 730
+ + + +LV +LSHGE ++ D ++ A P LA KPK+ F+QAC
Sbjct: 300 KHESHGDSAILV-ILSHGEENVIIGVDDIPISTHEIYDLLNAANAPRLANKPKIVFVQAC 358
Query: 731 QGDKLDGG 754
+G++ D G
Sbjct: 359 RGERRDNG 366
>Z93393-11|CAB07698.2| 536|Caenorhabditis elegans Hypothetical
protein Y48E1B.13a protein.
Length = 536
Score = 76.6 bits (180), Expect = 2e-14
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 2/155 (1%)
Frame = +2
Query: 299 SSQGRRYAKMPVERYAHYYNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLR 478
S R AK ++ + Y MN N RG +I ++E+F+ N++ R GT D +L+K+ +
Sbjct: 267 SRMPRTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFK--NMERRVGTKQDEVNLTKLFQ 324
Query: 479 GLGFSVTVLHNLRAEDINRYIQQISEMDHTDNDCLLVAVLSHGE-LGMLYAKDTHYKPDN 655
L ++V NL AE + I++ +EM HTD+ +++ +LSHG+ G ++ D P N
Sbjct: 325 KLQYTVICKRNLEAESMLEAIKEFAEMAHTDS--IILFLLSHGDGAGSVFGIDD--MPVN 380
Query: 656 LWYYFT-ADKCPTLAGKPKLFFIQACQGDKLDGGI 757
+ T L KPK + AC+G KL+ G+
Sbjct: 381 VMEVSTYLAYHQNLLLKPKWVAVSACRGGKLNMGV 415
>AF088285-1|AAC98292.1| 536|Caenorhabditis elegans caspase-related
protein 1A protein.
Length = 536
Score = 76.6 bits (180), Expect = 2e-14
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 2/155 (1%)
Frame = +2
Query: 299 SSQGRRYAKMPVERYAHYYNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLR 478
S R AK ++ + Y MN N RG +I ++E+F+ N++ R GT D +L+K+ +
Sbjct: 267 SRMPRTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFK--NMERRVGTKQDEVNLTKLFQ 324
Query: 479 GLGFSVTVLHNLRAEDINRYIQQISEMDHTDNDCLLVAVLSHGE-LGMLYAKDTHYKPDN 655
L ++V NL AE + I++ +EM HTD+ +++ +LSHG+ G ++ D P N
Sbjct: 325 KLQYTVICKRNLEAESMLEAIKEFAEMAHTDS--IILFLLSHGDGAGSVFGIDD--MPVN 380
Query: 656 LWYYFT-ADKCPTLAGKPKLFFIQACQGDKLDGGI 757
+ T L KPK + AC+G KL+ G+
Sbjct: 381 VMEVSTYLAYHQNLLLKPKWVAVSACRGGKLNMGV 415
>Z93393-12|CAD18879.1| 268|Caenorhabditis elegans Hypothetical
protein Y48E1B.13b protein.
Length = 268
Score = 76.2 bits (179), Expect = 3e-14
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Frame = +2
Query: 311 RRYAKMPVERYAHYYNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGF 490
R AK ++ + Y MN N RG +I ++E+F+ N++ R GT D +L+K+ + L +
Sbjct: 3 RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFK--NMERRVGTKQDEVNLTKLFQKLQY 60
Query: 491 SVTVLHNLRAEDINRYIQQISEMDHTDNDCLLVAVLSHGE-LGMLYAKDTHYKPDNLWYY 667
+V NL AE + I++ +EM HTD+ +++ +LSHG+ G ++ D P N+
Sbjct: 61 TVICKRNLEAESMLEAIKEFAEMAHTDS--IILFLLSHGDGAGSVFGIDD--MPVNVMEV 116
Query: 668 FT-ADKCPTLAGKPKLFFIQACQGDKLDGGI 757
T L KPK + AC+G KL+ G+
Sbjct: 117 STYLAYHQNLLLKPKWVAVSACRGGKLNMGV 147
>AF088286-1|AAC98293.1| 268|Caenorhabditis elegans caspase-related
protein 1B protein.
Length = 268
Score = 76.2 bits (179), Expect = 3e-14
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Frame = +2
Query: 311 RRYAKMPVERYAHYYNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGF 490
R AK ++ + Y MN N RG +I ++E+F+ N++ R GT D +L+K+ + L +
Sbjct: 3 RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFK--NMERRVGTKQDEVNLTKLFQKLQY 60
Query: 491 SVTVLHNLRAEDINRYIQQISEMDHTDNDCLLVAVLSHGE-LGMLYAKDTHYKPDNLWYY 667
+V NL AE + I++ +EM HTD+ +++ +LSHG+ G ++ D P N+
Sbjct: 61 TVICKRNLEAESMLEAIKEFAEMAHTDS--IILFLLSHGDGAGSVFGIDD--MPVNVMEV 116
Query: 668 FT-ADKCPTLAGKPKLFFIQACQGDKLDGGI 757
T L KPK + AC+G KL+ G+
Sbjct: 117 STYLAYHQNLLLKPKWVAVSACRGGKLNMGV 147
>Z93393-13|CAD18880.1| 149|Caenorhabditis elegans Hypothetical
protein Y48E1B.13c protein.
Length = 149
Score = 74.9 bits (176), Expect = 7e-14
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = +2
Query: 311 RRYAKMPVERYAHYYNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGF 490
R AK ++ + Y MN N RG +I ++E+F+ N++ R GT D +L+K+ + L +
Sbjct: 3 RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFK--NMERRVGTKQDEVNLTKLFQKLQY 60
Query: 491 SVTVLHNLRAEDINRYIQQISEMDHTDNDCLLVAVLSHGE-LGMLYAKDTHYKPDNLWYY 667
+V NL AE + I++ +EM HTD+ +++ +LSHG+ G ++ D P N+
Sbjct: 61 TVICKRNLEAESMLEAIKEFAEMAHTDS--IILFLLSHGDGAGSVFGIDD--MPVNVMEV 116
Query: 668 FT-ADKCPTLAGKPKLFFIQACQGDKLDGG 754
T L KPK + AC+G K++ G
Sbjct: 117 STYLAYHQNLLLKPKWVAVSACRGGKIEHG 146
>AF088287-1|AAC98294.1| 149|Caenorhabditis elegans caspase-related
protein 1C protein.
Length = 149
Score = 74.9 bits (176), Expect = 7e-14
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = +2
Query: 311 RRYAKMPVERYAHYYNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGF 490
R AK ++ + Y MN N RG +I ++E+F+ N++ R GT D +L+K+ + L +
Sbjct: 3 RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFK--NMERRVGTKQDEVNLTKLFQKLQY 60
Query: 491 SVTVLHNLRAEDINRYIQQISEMDHTDNDCLLVAVLSHGE-LGMLYAKDTHYKPDNLWYY 667
+V NL AE + I++ +EM HTD+ +++ +LSHG+ G ++ D P N+
Sbjct: 61 TVICKRNLEAESMLEAIKEFAEMAHTDS--IILFLLSHGDGAGSVFGIDD--MPVNVMEV 116
Query: 668 FT-ADKCPTLAGKPKLFFIQACQGDKLDGG 754
T L KPK + AC+G K++ G
Sbjct: 117 STYLAYHQNLLLKPKWVAVSACRGGKIEHG 146
>AF088289-1|AAC98296.1| 263|Caenorhabditis elegans caspase-related
protein 2B protein.
Length = 263
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/135 (29%), Positives = 70/135 (51%)
Frame = +2
Query: 353 YNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGFSVTVLHNLRAEDIN 532
Y N +++ AII N+ F ++ R G++ D LSK+ LG+ T NL++ +I
Sbjct: 18 YRNNRSSKCRAIIINNVVF--CGMEKRIGSDKDKKKLSKLFERLGYQSTSYDNLKSSEIL 75
Query: 533 RYIQQISEMDHTDNDCLLVAVLSHGELGMLYAKDTHYKPDNLWYYFTADKCPTLAGKPKL 712
++Q ++ +H D L++ ++SHG+ G+LY D P + +LA KPK
Sbjct: 76 ETVRQFTQSNH--GDSLIITIMSHGDQGLLYGVDG--VPVQMLDIIDLMCTASLAKKPKW 131
Query: 713 FFIQACQGDKLDGGI 757
C+GD++D +
Sbjct: 132 LMCVCCRGDRIDRAV 146
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/135 (29%), Positives = 70/135 (51%)
Frame = +2
Query: 353 YNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGFSVTVLHNLRAEDIN 532
Y N +++ AII N+ F ++ R G++ D LSK+ LG+ T NL++ +I
Sbjct: 581 YRNNRSSKCRAIIINNVVF--CGMEKRIGSDKDKKKLSKLFERLGYQSTSYDNLKSSEIL 638
Query: 533 RYIQQISEMDHTDNDCLLVAVLSHGELGMLYAKDTHYKPDNLWYYFTADKCPTLAGKPKL 712
++Q ++ +H D L++ ++SHG+ G+LY D P + +LA KPK
Sbjct: 639 ETVRQFTQSNH--GDSLIITIMSHGDQGLLYGVDG--VPVQMLDIIDLMCTASLAKKPKW 694
Query: 713 FFIQACQGDKLDGGI 757
C+GD++D +
Sbjct: 695 LMCVCCRGDRIDRAV 709
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/135 (29%), Positives = 70/135 (51%)
Frame = +2
Query: 353 YNMNHNNRGMAIIFNHEHFEIHNLKSRTGTNVDSDSLSKVLRGLGFSVTVLHNLRAEDIN 532
Y N +++ AII N+ F ++ R G++ D LSK+ LG+ T NL++ +I
Sbjct: 581 YRNNRSSKCRAIIINNVVF--CGMEKRIGSDKDKKKLSKLFERLGYQSTSYDNLKSSEIL 638
Query: 533 RYIQQISEMDHTDNDCLLVAVLSHGELGMLYAKDTHYKPDNLWYYFTADKCPTLAGKPKL 712
++Q ++ +H D L++ ++SHG+ G+LY D P + +LA KPK
Sbjct: 639 ETVRQFTQSNH--GDSLIITIMSHGDQGLLYGVDG--VPVQMLDIIDLMCTASLAKKPKW 694
Query: 713 FFIQACQGDKLDGGI 757
C+GD++D +
Sbjct: 695 LMCVCCRGDRIDRAV 709
>AF077542-10|AAC26297.1| 177|Caenorhabditis elegans Hypothetical
protein Y57G7A.2 protein.
Length = 177
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 245 EQRKNGNEDEGDAWGSHGSSQGRRYAKMPVERYAHYYNMNHNN 373
+QR N D G+HG+ QG R + V+ + ++ N N+NN
Sbjct: 134 KQRLRKNRGRYDPIGAHGAQQGTRGVQNEVQYHRNFQNNNNNN 176
>Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical
protein F35C12.3a protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.61
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +2
Query: 263 NEDEGDAWGSHGSSQGRRYAKMPVER-YAHYYNMNHNNRGMAIIFNHEHFEIHNLKSRTG 439
N D GD+WG+ + QG + + + + Y Y NM H + + +H N G
Sbjct: 7 NNDFGDSWGAGYALQGVNFLDLNLRKNYRQYANMPH------LFTDGQHQPFQN-SFIVG 59
Query: 440 TNVDSDSLSKVLRGLGFSVTVLHNL---RAEDINRYIQQISEMDHT 568
VDS + L + L+ + + E + ++ ++++++ HT
Sbjct: 60 AEVDSSKFTSHAVALDIPLPGLNEMFDFQEETLEKHDEELTDIYHT 105
>AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical
protein Y75B8A.3 protein.
Length = 827
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 215 EEKKNNGSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVERYAHYYNMNHNNRGM 382
++ N T+ ++ N+ + D G ++QG Y + + Y N N N +G+
Sbjct: 474 QQVNNQYQNTQGQQTNNQYQYDQGGQQTNNQGAYYGGVVAGQQTTYQNQNQNQQGV 529
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 227 NNGSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVERYAHYYNMNHNNRGMA 385
N+G+ E GN GD W + S E Y +YNM + +A
Sbjct: 471 NDGNNWESNNGGNGGGGDNWNNGNSGNNGNNNGNGDEDYGDWYNMKMKDPSVA 523
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 227 NNGSGTEQRKNGNEDEGDAWGSHGSSQG 310
N GSG+ G + D WGS+ + G
Sbjct: 343 NGGSGSNGGSGGGNTDNDNWGSNNGNSG 370
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 227 NNGSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVERYAHYYNMNHNNRGMA 385
N+G+ E GN GD W + S E Y +YNM + +A
Sbjct: 471 NDGNNWESNNGGNGGGGDNWNNGNSGNNGNNNGNGDEDYGDWYNMKMKDPSVA 523
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 227 NNGSGTEQRKNGNEDEGDAWGSHGSSQG 310
N GSG+ G + D WGS+ + G
Sbjct: 343 NGGSGSNGGSGGGNTDNDNWGSNNGNSG 370
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 452 SDSLSKVLRGLGFSVTVLHNLRAEDINRYIQQ 547
+D LSK L LGF TVLH + +D Y Q
Sbjct: 586 ADMLSKGLTKLGFKPTVLHGGKGQDQREYALQ 617
>Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 263 NEDEGDAWGSHGSSQGRRYAKMPVER-YAHYYNMNH 367
N D GD+WG+ + QG + + + + Y Y NM H
Sbjct: 104 NNDFGDSWGAGYALQGVNFLDLNLRKNYRQYANMPH 139
>AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 263 NEDEGDAWGSHGSSQGRRYAKMPVER-YAHYYNMNH 367
N D GD+WG+ + QG + + + + Y Y NM H
Sbjct: 104 NNDFGDSWGAGYALQGVNFLDLNLRKNYRQYANMPH 139
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical
protein C38D4.3 protein.
Length = 1784
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +2
Query: 251 RKNGNEDE-GDAWGSHGSSQGRRYAKMPVERYAHYYNMNHNNRGMAIIFNHEHFEIHN-L 424
RK G ED + + GS+ R + ER N I F+I +
Sbjct: 353 RKRGTEDSMHNVSQTFGSTSNRNSVLLAYERKKMVIGTEDPNAEPEYIVEAAIFDIDSWY 412
Query: 425 KSRTGTNVDSDSLSKVLRGLGFSVTVLHNLRAEDIN 532
R V +D VL+ F T+ N+R+ED+N
Sbjct: 413 YKRVPGRVSTDGT--VLKQCAFLSTIKSNIRSEDVN 446
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 212 DEEKKNNGSGTEQRKNGNEDEGDAWGSHGSSQG 310
+ + K+NG G + KN EDE D G+ +G
Sbjct: 410 NNKNKDNGKGKGKGKNDEEDEEDNGDEDGNGKG 442
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 212 DEEKKNNGSGTEQRKNGNEDEGDAWGSHGSSQG 310
+ + K+NG G + KN EDE D G+ +G
Sbjct: 410 NNKNKDNGKGKGKGKNDEEDEEDNGDEDGNGKG 442
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,596,306
Number of Sequences: 27780
Number of extensions: 383130
Number of successful extensions: 936
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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