Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_C22
(994 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1174 - 26696869-26698191 34 0.20
03_01_0515 - 3864796-3865425 32 0.62
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 31 1.1
11_06_0610 - 25449085-25453284 31 1.4
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.4
04_04_1125 + 31085106-31085714 31 1.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.5
08_01_0059 - 394001-394708 30 2.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 2.5
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 30 3.3
01_01_0715 - 5542648-5543219,5543352-5543544 30 3.3
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 4.4
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 4.4
11_01_0066 - 536281-537196,537397-537452 29 5.8
06_03_1310 + 29238644-29240260 29 5.8
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 29 5.8
12_01_0909 - 8828921-8829004,8829204-8829249,8829798-8829919,883... 29 7.6
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 7.6
06_01_0486 - 3455030-3455770 29 7.6
03_06_0297 - 32924162-32924605 29 7.6
>12_02_1174 - 26696869-26698191
Length = 440
Score = 33.9 bits (74), Expect = 0.20
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +2
Query: 812 PXXXTXPXXNP-PPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXPPXPLXDP 982
P T P +P PPP P T P P P +P P PP P P
Sbjct: 111 PEFKTPPALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPP 168
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +2
Query: 809 PPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXPP 964
PP P PPPP P P + P P +P PS PP
Sbjct: 181 PPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQ------PPPTLPPPSPPPPPP 226
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = +2
Query: 794 PXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXPP 964
P P + P PPPP P S P + P P + PS PP
Sbjct: 141 PPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQ--PPPSLQPPSPPPPPP 195
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.3 bits (70), Expect = 0.62
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Frame = +2
Query: 794 PXXXXPPXXXTXPXX--NPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXPPX 967
P PP P +PPPP PL P P P P P PP
Sbjct: 43 PTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPP 102
Query: 968 PLXDP 982
P P
Sbjct: 103 PPSPP 107
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 454 PPXLGYMKPGALXYAPPKQXPP 519
PP GYM P + Y PP Q PP
Sbjct: 423 PPYGGYMPPPRMPYPPPPQYPP 444
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/68 (26%), Positives = 19/68 (27%)
Frame = +2
Query: 767 LTPLXRXXXPXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPS 946
L P P P P +PPPP P P P P I P
Sbjct: 1120 LPPPATVSLPPPTVKPLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPP 1179
Query: 947 XXXXPPXP 970
PP P
Sbjct: 1180 PVKSPPPP 1187
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +2
Query: 773 PLXRXXXPXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXX 952
P+ P PP P +PPPP P P P P I P
Sbjct: 1157 PVILPPPPIKSPPPPA---PVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPV 1213
Query: 953 XXPPXP 970
PP P
Sbjct: 1214 KSPPPP 1219
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/72 (27%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +2
Query: 773 PLXRXXXPXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXI--PXPS 946
P+ P PP P PPPP P P P P I P P
Sbjct: 1141 PVSSPPPPEKSPPPPA---PVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPV 1197
Query: 947 XXXXPPXPLXDP 982
PP P+ P
Sbjct: 1198 KSPPPPAPVISP 1209
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/72 (27%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +2
Query: 773 PLXRXXXPXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXI--PXPS 946
P+ P PP P PPPP P P P P I P P
Sbjct: 1173 PVISPPPPVKSPPPPA---PVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPV 1229
Query: 947 XXXXPPXPLXDP 982
PP P+ P
Sbjct: 1230 KSPPPPAPVISP 1241
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = +2
Query: 773 PLXRXXXPXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXX 952
PL P P P +PP P P SLP P P P
Sbjct: 1131 PLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPS 1190
Query: 953 XXPPXPLXDP 982
PP P P
Sbjct: 1191 GPPPQPAPPP 1200
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +2
Query: 809 PPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXPPXP 970
PP + P PPPP PL + P S P P P PP P
Sbjct: 1158 PPLPPSPPPATPPPPP--PLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIP 1209
>04_04_1125 + 31085106-31085714
Length = 202
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 809 PPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIP-XPSXXXXPPXP 970
P P PPPP P T+ P T + P P P+ PP P
Sbjct: 35 PTTKPPPPPCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTP 89
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +2
Query: 809 PPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPS 946
PP T P P PP P T P T ++ P P P+
Sbjct: 59 PPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPATPTTPPTPAPA 104
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = +2
Query: 794 PXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXPPXPL 973
P PP P +PPPP P P + S P P P P P P
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPP---PPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPP 603
Query: 974 XDP 982
P
Sbjct: 604 PPP 606
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +2
Query: 830 PXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXPPXPLXDPXR 988
P PPPP PL ++ P P PS PP P P R
Sbjct: 563 PPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNR 615
>08_01_0059 - 394001-394708
Length = 235
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 809 PPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXI-PXPSXXXXPPXPLXDP 982
PP P PPPP P A P P P P PS PP P P
Sbjct: 6 PPRRAPPPPATPPPP---PRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISP 61
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = +2
Query: 809 PPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXP---SXXXXPPXPLXD 979
P P PPPP PL A+S + LP P P P + P PL
Sbjct: 193 PGTEEAGPSTLPPPPPPPPLPASSEPVDPSAASLPPLPPPPPPPPKPANIAGAPGLPLPP 252
Query: 980 P 982
P
Sbjct: 253 P 253
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 436 GALGGRP---PXLGYMKPGALXYAPPKQXPP 519
G GG P P GYM+PGA APP+ P
Sbjct: 392 GPHGGAPMQQPGYGYMQPGAYPGAPPQYGAP 422
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Frame = +2
Query: 824 TXPXXNPPPPXXXPLXATSXXXPXTEXXXSS----LPXPXIPXPSXXXXPPXPLXDP 982
T +PPPP P T P ++ P P +P P+ PP P P
Sbjct: 139 TPTTPSPPPPPTVPAAPTPRPSPPPPAAGTNGTARAPSPPVPAPAPAGSPPPPPPPP 195
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.5 bits (63), Expect = 4.4
Identities = 21/69 (30%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = +2
Query: 773 PLXRXXXPXXXXPPXXXTXPXXN---PPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXP 943
P P PP P + PPPP PL T P + S P P +P P
Sbjct: 63 PTPTVTTPTPPPPPPAPRPPRRHHRIPPPPP--PLLPTPPPPPAS---ISPTPAPPLPPP 117
Query: 944 SXXXXPPXP 970
PP P
Sbjct: 118 PAPAPPPTP 126
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 830 PXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXPPXPLXDP 982
P PPPP P A P + S P P P S PP P P
Sbjct: 66 PGSLPPPPPRPPSFAPENALPPSSPPPPSPPPP--PPSSPPPVPPSPTAAP 114
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +2
Query: 782 RXXXPXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXP 961
R P PP T P PP P AT T + P P P P+ P
Sbjct: 208 RPLPPASPPPPSIATPPPSPASPPP--PSTATPPPPSPTPTTTRASPTPP-PIPTATVRP 264
Query: 962 PXPL 973
P PL
Sbjct: 265 PPPL 268
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = +2
Query: 770 TPLXRXXXPXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSX 949
TPL P P T P PPP P +E SS+P P S
Sbjct: 376 TPLAPHRSPLPHHMPPRRTPPTP-PPPSSPTPSHLPPPPPTYSESPKSSMPPSTSPPSSH 434
Query: 950 XXXPPXPLXDP 982
PP P
Sbjct: 435 GASPPSSSSSP 445
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = +2
Query: 830 PXXNPPPPXXXPLXATSXXXPXTEXXXSSLP---XPXIPXPSXXXXPPXPLXDP 982
P PPPP P T P LP P +P P P P DP
Sbjct: 964 PPPPPPPPNVAPPPFTRQDIPPPPPSPPPLPITQPPSVPPPPNSPPPLQPATDP 1017
>12_01_0909 -
8828921-8829004,8829204-8829249,8829798-8829919,
8830013-8830078,8830520-8830771,8830859-8830939,
8831193-8831294,8831373-8831410,8831497-8831602,
8831694-8831816,8831918-8831994,8833095-8833240,
8833355-8833533
Length = 473
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 329 SPATTSRRQ*SSFAGTTTQPTYIKLERAGVSWRVRSGLSGGGPRCW 466
+PA T + GTTT+P ++ G +W +R+ + G W
Sbjct: 308 TPANTKLPKSFQHLGTTTKPLAVRTRMHGRAWPLRAPVRAGRVPSW 353
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.7 bits (61), Expect = 7.6
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +2
Query: 794 PXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSXXXXPPXP 970
P PP P PPPP PL T T S P +P P PP P
Sbjct: 74 PPPQTPPSPPPPPP--PPPPPPPPLSPTPTTTSWTTNSSSISASPILPPP---PPPPMP 127
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 7.6
Identities = 17/65 (26%), Positives = 19/65 (29%)
Frame = +2
Query: 770 TPLXRXXXPXXXXPPXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIPXPSX 949
TP P PP P PP P P P P P +P P+
Sbjct: 83 TPRPPPTPPYVPSPPPY-VPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTP 141
Query: 950 XXXPP 964
PP
Sbjct: 142 PSPPP 146
>03_06_0297 - 32924162-32924605
Length = 147
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/58 (27%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +2
Query: 812 PXXXTXPXXNPPPPXXXPLXATSXXXPXTEXXXSSLPXPXIP-XPSXXXXPPXPLXDP 982
P T P PP P+ P E S+P P +P P P P P
Sbjct: 62 PSIDTPPEFEAPPGLDVPMPPPGAPTPGPEQPGPSIPSPPMPEVPDVPRNPDVPPPKP 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,640,347
Number of Sequences: 37544
Number of extensions: 333795
Number of successful extensions: 1368
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2905255520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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