Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_C19
(866 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46837-1|AAA98511.1| 144|Homo sapiens SRB7 protein. 118 3e-26
CR456999-1|CAG33280.1| 144|Homo sapiens SURB7 protein. 118 3e-26
BC008380-1|AAH08380.1| 144|Homo sapiens SRB7 suppressor of RNA ... 118 3e-26
U52960-1|AAB06944.1| 144|Homo sapiens RNA polymerase II complex... 117 6e-26
U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein. 34 0.77
BC035913-1|AAH35913.1| 737|Homo sapiens PCNT protein protein. 34 0.77
AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein. 34 0.77
AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein. 34 0.77
AB033055-1|BAA86543.1| 696|Homo sapiens KIAA1229 protein protein. 32 3.1
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 31 4.1
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 31 4.1
BC016881-1|AAH16881.1| 638|Homo sapiens Unknown (protein for IM... 31 4.1
AK055435-1|BAB70922.1| 634|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 31 4.1
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 31 4.1
BC042672-1|AAH42672.1| 486|Homo sapiens coiled-coil domain cont... 30 9.5
BC022020-1|AAH22020.2| 486|Homo sapiens coiled-coil domain cont... 30 9.5
AL391839-5|CAH70456.1| 486|Homo sapiens coiled-coil domain cont... 30 9.5
AL354750-3|CAI39706.1| 486|Homo sapiens coiled-coil domain cont... 30 9.5
AL354750-2|CAI39704.1| 160|Homo sapiens coiled-coil domain cont... 30 9.5
AK058148-1|BAB71686.1| 358|Homo sapiens protein ( Homo sapiens ... 30 9.5
>U46837-1|AAA98511.1| 144|Homo sapiens SRB7 protein.
Length = 144
Score = 118 bits (284), Expect = 3e-26
Identities = 66/131 (50%), Positives = 80/131 (61%)
Frame = +3
Query: 126 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 305
MADRLTQLQD +N A+ FCN+IG+LQQ P+ F + E+YA LFA
Sbjct: 1 MADRLTQLQDAVNSLADQFCNAIGVLQQCGPPASFNNIQTAINKDQPANPT-EEYAQLFA 59
Query: 306 ALISRCAKDIDTXXXXXXXXXXXXXXQVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQ 485
ALI+R AKDID Q SL +LE EN EAA LE+VV +G++LLEKIQ
Sbjct: 60 ALIARTAKDIDVLIDSLPSEESTAALQAASLYKLEEENHEAATCLEDVVYRGDMLLEKIQ 119
Query: 486 GALSDIAQCQL 518
AL+DIAQ QL
Sbjct: 120 SALADIAQSQL 130
>CR456999-1|CAG33280.1| 144|Homo sapiens SURB7 protein.
Length = 144
Score = 118 bits (284), Expect = 3e-26
Identities = 66/131 (50%), Positives = 80/131 (61%)
Frame = +3
Query: 126 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 305
MADRLTQLQD +N A+ FCN+IG+LQQ P+ F + E+YA LFA
Sbjct: 1 MADRLTQLQDAVNSLADQFCNAIGVLQQCGPPASFNNIQTAINKDQPANPT-EEYAQLFA 59
Query: 306 ALISRCAKDIDTXXXXXXXXXXXXXXQVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQ 485
ALI+R AKDID Q SL +LE EN EAA LE+VV +G++LLEKIQ
Sbjct: 60 ALIARTAKDIDVLIDSLPSEESTAALQAASLYKLEEENHEAATCLEDVVYRGDMLLEKIQ 119
Query: 486 GALSDIAQCQL 518
AL+DIAQ QL
Sbjct: 120 SALADIAQSQL 130
>BC008380-1|AAH08380.1| 144|Homo sapiens SRB7 suppressor of RNA
polymerase B homolog (yeast) protein.
Length = 144
Score = 118 bits (284), Expect = 3e-26
Identities = 66/131 (50%), Positives = 80/131 (61%)
Frame = +3
Query: 126 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 305
MADRLTQLQD +N A+ FCN+IG+LQQ P+ F + E+YA LFA
Sbjct: 1 MADRLTQLQDAVNSLADQFCNAIGVLQQCGPPASFNNIQTAINKDQPANPT-EEYAQLFA 59
Query: 306 ALISRCAKDIDTXXXXXXXXXXXXXXQVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQ 485
ALI+R AKDID Q SL +LE EN EAA LE+VV +G++LLEKIQ
Sbjct: 60 ALIARTAKDIDVLIDSLPSEESTAALQAASLYKLEEENHEAATCLEDVVYRGDMLLEKIQ 119
Query: 486 GALSDIAQCQL 518
AL+DIAQ QL
Sbjct: 120 SALADIAQSQL 130
>U52960-1|AAB06944.1| 144|Homo sapiens RNA polymerase II complex
component SRB7 protein.
Length = 144
Score = 117 bits (281), Expect = 6e-26
Identities = 65/131 (49%), Positives = 80/131 (61%)
Frame = +3
Query: 126 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 305
MADRLTQLQD +N A+ FCN+IG+LQQ P+ F + E+YA LFA
Sbjct: 1 MADRLTQLQDAVNSLADQFCNAIGVLQQCGPPASFNNIQTAINKDQPANPT-EEYAQLFA 59
Query: 306 ALISRCAKDIDTXXXXXXXXXXXXXXQVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQ 485
ALI+R AKDID Q SL +LE EN EAA +E+VV +G++LLEKIQ
Sbjct: 60 ALIARTAKDIDVLIDSLPSEESTAALQAASLYKLEEENHEAATCVEDVVYRGDMLLEKIQ 119
Query: 486 GALSDIAQCQL 518
AL+DIAQ QL
Sbjct: 120 SALADIAQSQL 130
>U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.
Length = 3321
Score = 33.9 bits (74), Expect = 0.77
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -3
Query: 324 HNEKLEP-RIKPHNPLDSAVVEESENHRVRSLGT--C*AARTAVECRCCYKSSQLVGLWC 154
H ++LEP R K P A +EES H++ +L + C V RCC ++S L W
Sbjct: 577 HVDELEPERHKESLPRFQAELEESHRHQLEALESPLCIQHEGHVSDRCCVETSALGHEWR 636
Query: 153 LE 148
LE
Sbjct: 637 LE 638
>BC035913-1|AAH35913.1| 737|Homo sapiens PCNT protein protein.
Length = 737
Score = 33.9 bits (74), Expect = 0.77
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -3
Query: 324 HNEKLEP-RIKPHNPLDSAVVEESENHRVRSLGT--C*AARTAVECRCCYKSSQLVGLWC 154
H ++LEP R K P A +EES H++ +L + C V RCC ++S L W
Sbjct: 564 HVDELEPERHKESLPRFQAELEESHRHQLEALESPLCIQHEGHVSDRCCVETSALGHEWR 623
Query: 153 LE 148
LE
Sbjct: 624 LE 625
>AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.
Length = 3336
Score = 33.9 bits (74), Expect = 0.77
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -3
Query: 324 HNEKLEP-RIKPHNPLDSAVVEESENHRVRSLGT--C*AARTAVECRCCYKSSQLVGLWC 154
H ++LEP R K P A +EES H++ +L + C V RCC ++S L W
Sbjct: 577 HVDELEPERHKESLPRFQAELEESHRHQLEALESPLCIQHEGHVSDRCCVETSALGHEWR 636
Query: 153 LE 148
LE
Sbjct: 637 LE 638
>AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.
Length = 3284
Score = 33.9 bits (74), Expect = 0.77
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -3
Query: 324 HNEKLEP-RIKPHNPLDSAVVEESENHRVRSLGT--C*AARTAVECRCCYKSSQLVGLWC 154
H ++LEP R K P A +EES H++ +L + C V RCC ++S L W
Sbjct: 604 HVDELEPERHKESLPRFQAELEESHRHQLEALESPLCIQHEGHVSDRCCVETSALGHEWR 663
Query: 153 LE 148
LE
Sbjct: 664 LE 665
>AB033055-1|BAA86543.1| 696|Homo sapiens KIAA1229 protein protein.
Length = 696
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 758 SXXHESPVTNLQTTKKKLRH*ALRFETQNFKIHIILQYFC 639
S HE+ NL+ TK KLR E++N I I+L C
Sbjct: 396 SIEHENETLNLENTKLKLRFPCRITESKNMNILIVLDMLC 435
>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 31.5 bits (68), Expect = 4.1
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 390 QSLRRLEAENKEAAEQLEEVVRQGEILLEKIQG 488
Q+++ LE EN++ E+L ++ ++ ILL+K+ G
Sbjct: 294 QNIQDLEIENEDLKERLRKIQQEQRILLDKVNG 326
>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 31.5 bits (68), Expect = 4.1
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 390 QSLRRLEAENKEAAEQLEEVVRQGEILLEKIQG 488
Q+++ LE EN++ E+L ++ ++ ILL+K+ G
Sbjct: 294 QNIQDLEIENEDLKERLRKIQQEQRILLDKVNG 326
>BC016881-1|AAH16881.1| 638|Homo sapiens Unknown (protein for
IMAGE:3914496) protein.
Length = 638
Score = 31.5 bits (68), Expect = 4.1
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 390 QSLRRLEAENKEAAEQLEEVVRQGEILLEKIQG 488
Q+++ LE EN++ E+L ++ ++ ILL+K+ G
Sbjct: 281 QNIQDLEIENEDLKERLRKIQQEQRILLDKVNG 313
>AK055435-1|BAB70922.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ30873 fis, clone FEBRA2004325, moderately
similar to Canis familiaris mRNA for C3VS protein. ).
Length = 634
Score = 31.5 bits (68), Expect = 4.1
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 390 QSLRRLEAENKEAAEQLEEVVRQGEILLEKIQG 488
Q+++ LE EN++ E+L ++ ++ ILL+K+ G
Sbjct: 281 QNIQDLEIENEDLKERLRKIQQEQRILLDKVNG 313
>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
Length = 1416
Score = 31.5 bits (68), Expect = 4.1
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 390 QSLRRLEAENKEAAEQLEEVVRQGEILLEKIQG 488
Q+++ LE EN++ E+L ++ ++ ILL+K+ G
Sbjct: 294 QNIQDLEIENEDLKERLRKIQQEQRILLDKVNG 326
>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
Length = 1416
Score = 31.5 bits (68), Expect = 4.1
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 390 QSLRRLEAENKEAAEQLEEVVRQGEILLEKIQG 488
Q+++ LE EN++ E+L ++ ++ ILL+K+ G
Sbjct: 294 QNIQDLEIENEDLKERLRKIQQEQRILLDKVNG 326
>BC042672-1|AAH42672.1| 486|Homo sapiens coiled-coil domain
containing 7 protein.
Length = 486
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 384 QVQSLRRLEAENKEAAEQLEEVVRQGE 464
QVQ + RLE ENK EQL++ +++ E
Sbjct: 376 QVQKVARLEIENKVLQEQLKQALQEAE 402
>BC022020-1|AAH22020.2| 486|Homo sapiens coiled-coil domain
containing 7 protein.
Length = 486
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 384 QVQSLRRLEAENKEAAEQLEEVVRQGE 464
QVQ + RLE ENK EQL++ +++ E
Sbjct: 376 QVQKVARLEIENKVLQEQLKQALQEAE 402
>AL391839-5|CAH70456.1| 486|Homo sapiens coiled-coil domain
containing 7 protein.
Length = 486
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 384 QVQSLRRLEAENKEAAEQLEEVVRQGE 464
QVQ + RLE ENK EQL++ +++ E
Sbjct: 376 QVQKVARLEIENKVLQEQLKQALQEAE 402
>AL354750-3|CAI39706.1| 486|Homo sapiens coiled-coil domain
containing 7 protein.
Length = 486
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 384 QVQSLRRLEAENKEAAEQLEEVVRQGE 464
QVQ + RLE ENK EQL++ +++ E
Sbjct: 376 QVQKVARLEIENKVLQEQLKQALQEAE 402
>AL354750-2|CAI39704.1| 160|Homo sapiens coiled-coil domain
containing 7 protein.
Length = 160
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 384 QVQSLRRLEAENKEAAEQLEEVVRQGE 464
QVQ + RLE ENK EQL++ +++ E
Sbjct: 45 QVQKVARLEIENKVLQEQLKQALQEAE 71
>AK058148-1|BAB71686.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ25419 fis, clone TST03533. ).
Length = 358
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 384 QVQSLRRLEAENKEAAEQLEEVVRQGE 464
QVQ + RLE ENK EQL++ +++ E
Sbjct: 248 QVQKVARLEIENKVLQEQLKQALQEAE 274
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,675,856
Number of Sequences: 237096
Number of extensions: 1875233
Number of successful extensions: 11382
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11378
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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