Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_C18
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 44 2e-04
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 44 2e-04
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 44 2e-04
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 42 8e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 42 8e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 42 8e-04
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 38 0.010
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.072
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 35 0.072
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 35 0.095
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.095
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.13
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.13
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 34 0.17
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 34 0.17
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.22
U88167-5|AAB42227.1| 107|Caenorhabditis elegans Hypothetical pr... 33 0.29
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 33 0.38
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 32 0.51
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.7
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 3.6
Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 29 4.7
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.7
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 29 4.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 6.2
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 6.2
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 29 6.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 8.2
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 28 8.2
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 8.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/104 (27%), Positives = 31/104 (29%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQ 581
P P P G G PPP PP PP P PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP--RA 294
Query: 582 XFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPPQK 713
PPPP G PP GG PP PPP++
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPP---AGTGSPPPPPRQ 335
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/108 (22%), Positives = 28/108 (25%)
Frame = +3
Query: 378 PXKXXGXXPXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXX 557
P G P P P G PPP P P + GG P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS--PPPAGTGSPP 330
Query: 558 XPPXFFXQXFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXP 701
PP Q PP P GG G ++ + P
Sbjct: 331 PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGP 378
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/104 (27%), Positives = 31/104 (29%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQ 581
P P P G G PPP PP PP P PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP--RA 315
Query: 582 XFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPPQK 713
PPPP G PP GG PP PPP++
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPP---AGTGSPPPPPRQ 356
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/108 (22%), Positives = 28/108 (25%)
Frame = +3
Query: 378 PXKXXGXXPXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXX 557
P G P P P G PPP P P + GG P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS--PPPAGTGSPP 351
Query: 558 XPPXFFXQXFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXP 701
PP Q PP P GG G ++ + P
Sbjct: 352 PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGP 399
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/104 (27%), Positives = 31/104 (29%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQ 581
P P P G G PPP PP PP P PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP--RA 300
Query: 582 XFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPPQK 713
PPPP G PP GG PP PPP++
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPP---AGTGSPPPPPRQ 341
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/108 (22%), Positives = 28/108 (25%)
Frame = +3
Query: 378 PXKXXGXXPXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXX 557
P G P P P G PPP P P + GG P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS--PPPAGTGSPP 336
Query: 558 XPPXFFXQXFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXP 701
PP Q PP P GG G ++ + P
Sbjct: 337 PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGP 384
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 41.5 bits (93), Expect = 8e-04
Identities = 32/106 (30%), Positives = 32/106 (30%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQ 581
P P L GG PP PP G G PP P PP
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITG---GPPPPPPPGGLPPIT--- 739
Query: 582 XFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPPQKXG 719
PPPP GG PP GG PP PPP G
Sbjct: 740 --GGPPPPPPP-----GGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +3
Query: 378 PXKXXGXXPXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXX 557
P G P P L P GG PPP PP P GG G PP P
Sbjct: 736 PPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPP-PPPGGFKGGPPPPPPPGM 792
Query: 558 XPP 566
P
Sbjct: 793 FAP 795
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/73 (34%), Positives = 25/73 (34%)
Frame = +3
Query: 450 GGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXG 629
GG PPP PP P GG PP P PP PPPP G
Sbjct: 740 GGPPPPP----PPGGLPPISGGPP----PPPPPPGGCPP---------PPPPPPPGGFKG 782
Query: 630 GGXPPXXGGXGPP 668
G PP G P
Sbjct: 783 GPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 41.5 bits (93), Expect = 8e-04
Identities = 32/106 (30%), Positives = 32/106 (30%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQ 581
P P L GG PP PP G G PP P PP
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITG---GPPPPPPPGGLPPIT--- 739
Query: 582 XFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPPQKXG 719
PPPP GG PP GG PP PPP G
Sbjct: 740 --GGPPPPPPP-----GGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +3
Query: 378 PXKXXGXXPXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXX 557
P G P P L P GG PPP PP P GG G PP P
Sbjct: 736 PPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPP-PPPGGFKGGPPPPPPPGM 792
Query: 558 XPP 566
P
Sbjct: 793 FAP 795
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/73 (34%), Positives = 25/73 (34%)
Frame = +3
Query: 450 GGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXG 629
GG PPP PP P GG PP P PP PPPP G
Sbjct: 740 GGPPPPP----PPGGLPPISGGPP----PPPPPPGGCPP---------PPPPPPPGGFKG 782
Query: 630 GGXPPXXGGXGPP 668
G PP G P
Sbjct: 783 GPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 41.5 bits (93), Expect = 8e-04
Identities = 32/106 (30%), Positives = 32/106 (30%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQ 581
P P L GG PP PP G G PP P PP
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITG---GPPPPPPPGGLPPIT--- 322
Query: 582 XFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPPQKXG 719
PPPP GG PP GG PP PPP G
Sbjct: 323 --GGPPPPPPP-----GGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +3
Query: 378 PXKXXGXXPXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXX 557
P G P P L P GG PPP PP P GG G PP P
Sbjct: 319 PPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPP-PPPGGFKGGPPPPPPPGM 375
Query: 558 XPP 566
P
Sbjct: 376 FAP 378
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/73 (34%), Positives = 25/73 (34%)
Frame = +3
Query: 450 GGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXG 629
GG PPP PP P GG PP P PP PPPP G
Sbjct: 323 GGPPPPP----PPGGLPPISGGPP----PPPPPPGGCPP---------PPPPPPPGGFKG 365
Query: 630 GGXPPXXGGXGPP 668
G PP G P
Sbjct: 366 GPPPPPPPGMFAP 378
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 37.9 bits (84), Expect = 0.010
Identities = 29/98 (29%), Positives = 31/98 (31%), Gaps = 8/98 (8%)
Frame = +3
Query: 435 PXGGGGGXXPP---PXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXP-----PXFFXQXFX 590
P GG G P P PP PF G G PP P P P FF F
Sbjct: 492 PSGGPPGPFNPSGAPPSGGPPG--PFDPSGAPPSGMPPVPLPTDLPIPSESPSFFQWIFG 549
Query: 591 XPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPP 704
P P G P GPP + + PP
Sbjct: 550 RPKPSGPAGPAPSGEPPGPFDPSGPPPSESSEGSGIPP 587
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.072
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPP--XPXKXXXPPXFF 575
P P + P G GG PPP P +GG +G PP P PP F
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGF 451
Query: 576 XQXFXXPP 599
PP
Sbjct: 452 PPVGAPPP 459
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/85 (28%), Positives = 25/85 (29%), Gaps = 1/85 (1%)
Frame = +3
Query: 453 GXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGG 632
G PPP P P + G PP P P PPPP
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPP-PSAFGAPQGPGGPGGYGPPPPGGPGAPGSY 423
Query: 633 GXPP-XXGGXGPPXKKKNXXXXXPP 704
G P GG GPP PP
Sbjct: 424 GPPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/89 (25%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +3
Query: 462 PPPXXXX---PPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGG 632
PPP PP N PP PP Q F PPPP
Sbjct: 220 PPPIEQFGAIPPPNATIPSFPTSNAASPPVQEFAPPPPQQQQQQFQAPPPPMASHSSI-S 278
Query: 633 GXPPXXGGXGPPXKKKNXXXXXPPPQKXG 719
P G PP + PP + G
Sbjct: 279 STPVQQQGFAPPQQFGGPPPSGPPSEYGG 307
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +3
Query: 513 GGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXX 692
GG PP PP Q F PPP + G G PP G P +
Sbjct: 294 GGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQ--GFGAPPQGPPQGGPPQ---GSF 348
Query: 693 XXPPPQK 713
PPPQ+
Sbjct: 349 GAPPPQQ 355
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 35.1 bits (77), Expect = 0.072
Identities = 31/109 (28%), Positives = 34/109 (31%), Gaps = 15/109 (13%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPP----PXXXXPPXKXPFXRGGGXNWGXPPXPX------- 548
P P P G G PP P P P G N G PP P
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPM 767
Query: 549 KXXXPPXFFXQXFXXPPPPXXXXKXXGGGXPP----XXGGXGPPXKKKN 683
PP PPP + GG PP GG GPP + +N
Sbjct: 768 SSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPPFRPEN 816
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 34.7 bits (76), Expect = 0.095
Identities = 26/75 (34%), Positives = 27/75 (36%)
Frame = +3
Query: 444 GGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKX 623
G GG P PP PF GG +G P P PP F Q F P
Sbjct: 97 GLGGPPPGMPGGVPPQAQPFNPHGGSMFGGPGGP--GGPPP--FGQPFQQAPQGMFNVPT 152
Query: 624 XGGGXPPXXGGXGPP 668
G PP GG G P
Sbjct: 153 ---GPPPLMGGGGDP 164
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = +3
Query: 435 PXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXX 614
P G G PP P G G G PP P PPP
Sbjct: 101 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPP---- 156
Query: 615 XKXXGGGXP--PXXGGXGPP 668
GGG P P G GPP
Sbjct: 157 -LMGGGGDPRGPPGGMGGPP 175
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 34.7 bits (76), Expect = 0.095
Identities = 26/75 (34%), Positives = 27/75 (36%)
Frame = +3
Query: 444 GGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKX 623
G GG P PP PF GG +G P P PP F Q F P
Sbjct: 377 GLGGPPPGMPGGVPPQAQPFNPHGGSMFGGPGGP--GGPPP--FGQPFQQAPQGMFNVPT 432
Query: 624 XGGGXPPXXGGXGPP 668
G PP GG G P
Sbjct: 433 ---GPPPLMGGGGDP 444
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = +3
Query: 435 PXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXX 614
P G G PP P G G G PP P PPP
Sbjct: 381 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPP---- 436
Query: 615 XKXXGGGXP--PXXGGXGPP 668
GGG P P G GPP
Sbjct: 437 -LMGGGGDPRGPPGGMGGPP 455
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.13
Identities = 28/103 (27%), Positives = 29/103 (28%), Gaps = 1/103 (0%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXP-PPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFX 578
P P + P G P PP P P R G G P P PP
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP-----PPPGMR 342
Query: 579 QXFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPP 707
PPPP G G P PP PPP
Sbjct: 343 YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/91 (27%), Positives = 26/91 (28%)
Frame = +3
Query: 435 PXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXX 614
P G PP PP P G G PP P PP PPPP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP-----PPGMRYPGGMPPPPPPRY 355
Query: 615 XKXXGGGXPPXXGGXGPPXKKKNXXXXXPPP 707
G PP P + PPP
Sbjct: 356 PSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/83 (27%), Positives = 25/83 (30%)
Frame = +3
Query: 465 PPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGGXPP 644
PP P P G W PP P P PPPP GG PP
Sbjct: 278 PPTPGMTPRPPPPPSSG--MWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
Query: 645 XXGGXGPPXKKKNXXXXXPPPQK 713
PP + PPP +
Sbjct: 336 PP----PPGMRYPGGMPPPPPPR 354
Score = 31.9 bits (69), Expect = 0.67
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Frame = +3
Query: 378 PXKXXGXXPXPXXXXLXKKPXGGGGGXXPPPXXXX-----PPXKXPFXRGGGXNWGXPPX 542
P G P P P G GG PPP PP P G PP
Sbjct: 310 PPGMPGMPPPPPPSRFG--PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Query: 543 PXKXXXPPXFFXQXFXXPPPP 605
P + PP PPPP
Sbjct: 368 PSRPPAPPS--GHGMIPPPPP 386
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 462 PPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGGXP 641
PPP P P G PP P PP P PP G P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG----MPGMPPP 319
Query: 642 PXXGGXGPPXKKKNXXXXXPPP 707
P GPP PPP
Sbjct: 320 PPPSRFGPPG--MGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.13
Identities = 28/103 (27%), Positives = 29/103 (28%), Gaps = 1/103 (0%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXP-PPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFX 578
P P + P G P PP P P R G G P P PP
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP-----PPPGMR 352
Query: 579 QXFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPP 707
PPPP G G P PP PPP
Sbjct: 353 YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/91 (27%), Positives = 26/91 (28%)
Frame = +3
Query: 435 PXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXX 614
P G PP PP P G G PP P PP PPPP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP-----PPGMRYPGGMPPPPPPRY 365
Query: 615 XKXXGGGXPPXXGGXGPPXKKKNXXXXXPPP 707
G PP P + PPP
Sbjct: 366 PSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/83 (27%), Positives = 25/83 (30%)
Frame = +3
Query: 465 PPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGGXPP 644
PP P P G W PP P P PPPP GG PP
Sbjct: 288 PPTPGMTPRPPPPPSSG--MWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
Query: 645 XXGGXGPPXKKKNXXXXXPPPQK 713
PP + PPP +
Sbjct: 346 PP----PPGMRYPGGMPPPPPPR 364
Score = 31.9 bits (69), Expect = 0.67
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Frame = +3
Query: 378 PXKXXGXXPXPXXXXLXKKPXGGGGGXXPPPXXXX-----PPXKXPFXRGGGXNWGXPPX 542
P G P P P G GG PPP PP P G PP
Sbjct: 320 PPGMPGMPPPPPPSRFG--PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Query: 543 PXKXXXPPXFFXQXFXXPPPP 605
P + PP PPPP
Sbjct: 378 PSRPPAPPS--GHGMIPPPPP 396
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 462 PPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGGXP 641
PPP P P G PP P PP P PP G P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG----MPGMPPP 329
Query: 642 PXXGGXGPPXKKKNXXXXXPPP 707
P GPP PPP
Sbjct: 330 PPPSRFGPPG--MGGMPPPPPP 349
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.9 bits (74), Expect = 0.17
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Frame = +3
Query: 435 PXGGGGGXXPPP-----XXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPP 599
P GGG G PPP PP P+ G G PP + P + Q + PP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPY----GPPGGYPPQQQR----PPYQAQPYPGPP 724
Query: 600 PPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPP 704
PP + G G PP G P ++ PP
Sbjct: 725 PP---QQQRGYGYPPPP-QPGHPYQQPYGQMPPPP 755
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = +3
Query: 534 PPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPPQK 713
PP + PP Q + PPPP GG PP PP + + PP Q+
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPY-GPPGGYPPQQ--QRPPYQAQPYPGPPPPQQQ 729
Query: 714 XG 719
G
Sbjct: 730 RG 731
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.9 bits (74), Expect = 0.17
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Frame = +3
Query: 435 PXGGGGGXXPPP-----XXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPP 599
P GGG G PPP PP P+ G G PP + P + Q + PP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPY----GPPGGYPPQQQR----PPYQAQPYPGPP 724
Query: 600 PPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPP 704
PP + G G PP G P ++ PP
Sbjct: 725 PP---QQQRGYGYPPPP-QPGHPYQQPYGQMPPPP 755
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = +3
Query: 534 PPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPPQK 713
PP + PP Q + PPPP GG PP PP + + PP Q+
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPY-GPPGGYPPQQ--QRPPYQAQPYPGPPPPQQQ 729
Query: 714 XG 719
G
Sbjct: 730 RG 731
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Frame = +3
Query: 465 PPXXXXPPXKXPFXRGGGXNW-GXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGGXP 641
PP P G +W G PP PP + PPPP G P
Sbjct: 1427 PPSQNQYSMPPPVMGGHEGSWRGGPPM---RGMPPLGMMRGRGGPPPPRGMNSPMRGMPP 1483
Query: 642 PXXGGXGPPXKKKNXXXXXPPPQKXG 719
P GG GPP + PP + G
Sbjct: 1484 PMRGG-GPPMRGGPPMRGGPPMFRGG 1508
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/100 (29%), Positives = 32/100 (32%), Gaps = 5/100 (5%)
Frame = +3
Query: 435 PXGGGGGXXPPPXXXXPPXKX--PFXRGG--GXNWGXPPXPXKXXXPPXFFXQXFXXPPP 602
P GGG PP PP + P RGG G G P + F Q P
Sbjct: 1484 PMRGGG----PPMRGGPPMRGGPPMFRGGPPGPGRGMPSPMMRGSSMRGGFPQRGGGPGM 1539
Query: 603 -PXXXXKXXGGGXPPXXGGXGPPXKKKNXXXXXPPPQKXG 719
P P GG PP N PPP + G
Sbjct: 1540 GPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGG 1579
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 562 PPXFXXKXXXTPPPPKXXXKXXGG-GXPLXGGXXGPPXKKKIXGXGXPPXKXGG 720
PP + PPPP+ G P+ GG GPP + G PP GG
Sbjct: 1457 PPLGMMRGRGGPPPPRGMNSPMRGMPPPMRGG--GPPMRGGPPMRGGPPMFRGG 1508
>U88167-5|AAB42227.1| 107|Caenorhabditis elegans Hypothetical
protein D2092.8 protein.
Length = 107
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +3
Query: 441 GGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPP 605
GGG G PP P GGG G P P P F PPPP
Sbjct: 26 GGGCGGAAASPCAAPPMPPPVSCGGGC--GAAPYPAGPMAAPYFAPAAIAPPPPP 78
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = +3
Query: 525 WGXPPXPXKXXXPPXFFXQX---FXXPPPPXXXXKXXGGGXPPXXGGXGPP 668
W PP P PP + Q PPPP G P G GPP
Sbjct: 75 WRGPPGPSGPSGPPVYHNQGPPRGYPPPPPQGADTWRGAPPPAHHGHFGPP 125
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 32.3 bits (70), Expect = 0.51
Identities = 26/78 (33%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +3
Query: 435 PXGGGGGX--XPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPX 608
P GGGGG PP PP P GGG P P P PPP
Sbjct: 20 PSGGGGGCGCAPP-----PPPPSPCGCGGGGGLALPQLPPLSL--PSLGGGGGCCPPPAP 72
Query: 609 XXXKXXGGGXPPXXGGXG 662
GGG P G G
Sbjct: 73 ACGGGCGGGVAPAPIGGG 90
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +3
Query: 462 PPPXXXXPPXKX--PFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGG 635
PPP PP G N PP P PP PPPP GG
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPP-----PPPLPQNLSGAPPPPPPPPPMLGGP 589
Query: 636 XPP 644
PP
Sbjct: 590 PPP 592
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 595 PPPPKXXXKXXGGGXPLXGGXXGPPXKKKIXGXGXPPXKXGGKKXF 732
PPPP GGG P GG P G P GG F
Sbjct: 31 PPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGGYAQPGGGYGGAGGF 76
>Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical
protein C16D6.1 protein.
Length = 173
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 677 FFXGGPXXPPXRGXPPP 627
+F GGP PP G PPP
Sbjct: 64 WFNGGPPGPPPHGPPPP 80
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 562 PPXFXXKXXXTPPPPKXXXKXXGGGXPLXGGXXGPP 669
PP + PPPP GG GG GPP
Sbjct: 143 PPRHHRQYDPLPPPPPPPLMGGSGGHWRSGGERGPP 178
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 4.7
Identities = 25/88 (28%), Positives = 26/88 (29%)
Frame = +3
Query: 393 GXXPXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXF 572
G P P P G PPP PP F G + PP P P
Sbjct: 294 GFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPH---FGMGPPRGFMPPPHPMMFRGGP-- 348
Query: 573 FXQXFXXPPPPXXXXKXXGGGXPPXXGG 656
F PPPP PP GG
Sbjct: 349 -YPPFFPPPPPHFMRP----SSPPTDGG 371
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 4.7
Identities = 25/88 (28%), Positives = 26/88 (29%)
Frame = +3
Query: 393 GXXPXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXF 572
G P P P G PPP PP F G + PP P P
Sbjct: 294 GFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPH---FGMGPPRGFMPPPHPMMFRGGP-- 348
Query: 573 FXQXFXXPPPPXXXXKXXGGGXPPXXGG 656
F PPPP PP GG
Sbjct: 349 -YPPFFPPPPPHFMRP----SSPPTDGG 371
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +3
Query: 453 GXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXP-PXFFXQXFXXPPPPXXXXKXXG 629
G P P PP + PF N PP P P P + F PP G
Sbjct: 1036 GPRPMPPRPMPPQQSPFFNNAPGNGFYPPQPRDFSPPQPPQQSRMFPPSQPP------FG 1089
Query: 630 GGXPPXXGGXGP 665
PP G P
Sbjct: 1090 YAGPPNQGRGNP 1101
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -3
Query: 476 PXXGGXXPPXPPXGFFXQXXXXGXGGXPPXFXG 378
P G PP PP + G G PP F G
Sbjct: 440 PGGSGAPPPGPPGAYPGNGAPGGPPGGPPQFPG 472
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +3
Query: 465 PPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXPPXFF-XQXFXXPPPP 605
P PP F G WG PP + PP F + PPPP
Sbjct: 18 PDFFERPPPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPP 65
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +3
Query: 483 PPXKXPFXRGGGXNWGXPPXPXKXXXPPXFFXQXFXXPPPPXXXXKXXGGGXPPXXGGXG 662
PP F GG G PP P P F Q PPP G P G G
Sbjct: 478 PPRGGQFH--GGSQQGPPPPPPSQHHPRGFQQQAQQNPPPRGNNQGQSYHGAPRGMGNFG 535
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXP 563
P P P GG G PPP PP GGG P P + P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP----GGGGGMYPPLIPTRVPTP 820
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 402 PXPXXXXLXKKPXGGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXPPXPXKXXXP 563
P P P GG G PPP PP GGG P P + P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP----GGGGGMYPPLIPTRVPTP 820
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 441 GGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXP 536
GGGG P PP P GGG + P
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAP 82
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 441 GGGGGXXPPPXXXXPPXKXPFXRGGGXNWGXP 536
GGGG P PP P GGG + P
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAP 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,899,963
Number of Sequences: 27780
Number of extensions: 236665
Number of successful extensions: 1223
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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