Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_C13
         (1405 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071500-1|AAL49122.1|  514|Drosophila melanogaster RE55842p pro...    31   2.9  
AE014297-1038|AAF54448.2|  514|Drosophila melanogaster CG12946-P...    31   2.9  
AE014297-1037|ABI31156.1|  630|Drosophila melanogaster CG12946-P...    31   2.9  

>AY071500-1|AAL49122.1|  514|Drosophila melanogaster RE55842p
           protein.
          Length = 514

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -3

Query: 593 PPXPLKXXLXXPPXPGXXXXFGXGNSPPPXXXP 495
           PP P       PP P     FG G +PPP   P
Sbjct: 383 PPPPPAPPAGVPPAPPPMPVFGAGGAPPPPPPP 415


>AE014297-1038|AAF54448.2|  514|Drosophila melanogaster CG12946-PA,
           isoform A protein.
          Length = 514

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -3

Query: 593 PPXPLKXXLXXPPXPGXXXXFGXGNSPPPXXXP 495
           PP P       PP P     FG G +PPP   P
Sbjct: 383 PPPPPAPPAGVPPAPPPMPVFGAGGAPPPPPPP 415


>AE014297-1037|ABI31156.1|  630|Drosophila melanogaster CG12946-PB,
           isoform B protein.
          Length = 630

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -3

Query: 593 PPXPLKXXLXXPPXPGXXXXFGXGNSPPPXXXP 495
           PP P       PP P     FG G +PPP   P
Sbjct: 499 PPPPPAPPAGVPPAPPPMPVFGAGGAPPPPPPP 531


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,394,671
Number of Sequences: 53049
Number of extensions: 350660
Number of successful extensions: 811
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7701301224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)