Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_C12
         (902 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86741-2|BAA21841.1|   92|Caenorhabditis elegans ATP synthase su...    77   2e-14
D86740-2|BAA13165.1|   92|Caenorhabditis elegans ATP synthase su...    77   2e-14
AC090999-18|AAK26152.1|  116|Caenorhabditis elegans Hypothetical...    77   2e-14
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    30   2.0  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    30   2.0  
U97552-5|AAQ01520.1|  605|Caenorhabditis elegans Hypothetical pr...    30   2.6  
U97552-4|AAX55684.1|  666|Caenorhabditis elegans Hypothetical pr...    30   2.6  
U97552-3|AAQ01521.1|  663|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical p...    29   6.0  
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-...    29   6.0  
Z72502-3|CAA96593.2|  218|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>D86741-2|BAA21841.1|   92|Caenorhabditis elegans ATP synthase
           subunit protein.
          Length = 92

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 40/70 (57%), Positives = 43/70 (61%)
 Frame = +1

Query: 253 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 432
           A R   TT   KDIDSAAK+                    FG+L+IGYARNPSLKQQLFS
Sbjct: 6   AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65

Query: 433 YAILGFALSE 462
           YAILGFALSE
Sbjct: 66  YAILGFALSE 75


>D86740-2|BAA13165.1|   92|Caenorhabditis elegans ATP synthase
           subunit protein.
          Length = 92

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 40/70 (57%), Positives = 43/70 (61%)
 Frame = +1

Query: 253 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 432
           A R   TT   KDIDSAAK+                    FG+L+IGYARNPSLKQQLFS
Sbjct: 6   AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65

Query: 433 YAILGFALSE 462
           YAILGFALSE
Sbjct: 66  YAILGFALSE 75


>AC090999-18|AAK26152.1|  116|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.3 protein.
          Length = 116

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 40/70 (57%), Positives = 43/70 (61%)
 Frame = +1

Query: 253 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 432
           A R   TT   KDIDSAAK+                    FG+L+IGYARNPSLKQQLFS
Sbjct: 30  AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 89

Query: 433 YAILGFALSE 462
           YAILGFALSE
Sbjct: 90  YAILGFALSE 99


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -3

Query: 399  GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 223
            G   D+  + CS  S G + S  C C       +    +    G  GP C E CR  RY 
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591

Query: 222  LCMGGYSCKWSHQC 181
                G SC+   QC
Sbjct: 1592 ----GQSCQNKCQC 1601


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -3

Query: 399  GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 223
            G   D+  + CS  S G + S  C C       +    +    G  GP C E CR  RY 
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591

Query: 222  LCMGGYSCKWSHQC 181
                G SC+   QC
Sbjct: 1592 ----GQSCQNKCQC 1601


>U97552-5|AAQ01520.1|  605|Caenorhabditis elegans Hypothetical
           protein W05H7.4a protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = -3

Query: 324 TSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYSCKWSHQCRVAEDGRPGCQG 145
           ++ N+ G+R  + +D  GL   H +E+ R +  H  +  Y C  S +   A  G    Q 
Sbjct: 70  SNLNQRGTRRLIFADTRGLPLVHVKEIERIAAIHSNVADYRC--SERNEAAAFG----QE 123

Query: 144 RSVWRQTAFCFYKVRRATTKNTEKEETGL 58
             V+    +    V+R+    +E  E+GL
Sbjct: 124 MEVFEDVEWSLVPVKRSKPARSEMSESGL 152


>U97552-4|AAX55684.1|  666|Caenorhabditis elegans Hypothetical
           protein W05H7.4e protein.
          Length = 666

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = -3

Query: 324 TSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYSCKWSHQCRVAEDGRPGCQG 145
           ++ N+ G+R  + +D  GL   H +E+ R +  H  +  Y C  S +   A  G    Q 
Sbjct: 131 SNLNQRGTRRLIFADTRGLPLVHVKEIERIAAIHSNVADYRC--SERNEAAAFG----QE 184

Query: 144 RSVWRQTAFCFYKVRRATTKNTEKEETGL 58
             V+    +    V+R+    +E  E+GL
Sbjct: 185 MEVFEDVEWSLVPVKRSKPARSEMSESGL 213


>U97552-3|AAQ01521.1|  663|Caenorhabditis elegans Hypothetical
           protein W05H7.4b protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = -3

Query: 324 TSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYSCKWSHQCRVAEDGRPGCQG 145
           ++ N+ G+R  + +D  GL   H +E+ R +  H  +  Y C  S +   A  G    Q 
Sbjct: 128 SNLNQRGTRRLIFADTRGLPLVHVKEIERIAAIHSNVADYRC--SERNEAAAFG----QE 181

Query: 144 RSVWRQTAFCFYKVRRATTKNTEKEETGL 58
             V+    +    V+R+    +E  E+GL
Sbjct: 182 MEVFEDVEWSLVPVKRSKPARSEMSESGL 210


>Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical
           protein C54D10.6 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 550 PTYEVSVYTIWSGQPWNRMFGNLTLIVMQ 636
           P + VSVY I    PWN +F    ++V Q
Sbjct: 29  PLFLVSVYCILKKSPWNMVFYKWLILVFQ 57


>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
            x-hybridizingprotein 1, isoform a protein.
          Length = 1876

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
 Frame = +3

Query: 117  KMLSAARLIAPDSQVCHLLQLCTGATTC---SCT----HPYTDGTCCPYTALCSAV 263
            K  SA    AP    C + + CTG  TC    CT    H   DG C P  A  S V
Sbjct: 1428 KQKSAPAFAAP-GDTCSMREKCTGGATCFEGMCTCDDHHFAEDGYCRPIEARSSKV 1482


>Z72502-3|CAA96593.2|  218|Caenorhabditis elegans Hypothetical
           protein C08B6.6 protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 675 PVDAHCRCNTHQSLHHYEGEV 613
           P+   CRCNT  +LH  EG V
Sbjct: 98  PIYVLCRCNTTNTLHRREGVV 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,594,841
Number of Sequences: 27780
Number of extensions: 450989
Number of successful extensions: 1501
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)