Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_C09
(907 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 38 0.015
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.41
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.55
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 0.95
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 0.95
07_01_0080 + 587674-588510 31 1.7
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 30 2.2
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 30 2.9
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.1
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 29 5.1
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 29 5.1
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 29 6.7
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 29 6.7
04_03_1022 - 21778315-21779007 29 6.7
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 28 8.9
10_08_0614 - 19238064-19238132,19238381-19238407,19238436-192385... 28 8.9
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 37.5 bits (83), Expect = 0.015
Identities = 25/80 (31%), Positives = 26/80 (32%)
Frame = +3
Query: 660 KXGGXPXKKFXXKGPXKGXKPKXGXXGGFFPXXPPPXXXPKKXXPPXXXGGXTPRGXXKK 839
K G P K P G KPK G P PP PK P G K
Sbjct: 158 KPGPKPKPKPSPPKPKPGPKPKPPKPG---PKPKPPKPGPKPKPKPPKPGPKPKPKPPKP 214
Query: 840 XPGXXPGKNPXWGPLFXPXP 899
P PG W P+ P P
Sbjct: 215 GPKPKPGPPQPWWPIPFPKP 234
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 32.7 bits (71), Expect = 0.41
Identities = 39/140 (27%), Positives = 40/140 (28%)
Frame = +3
Query: 480 PXXGGXGGVFXXXKXPPPPGXXGFFFXXXXPXPPXKXXXPGFWGGGXVXXXXXGGXXXXX 659
P GG GV PPPP G P PP GG GG
Sbjct: 1113 PPPGGITGV------PPPPPIGGLGGHQAPPAPPLPEGI-----GGVPPPPPVGGL---- 1157
Query: 660 KXGGXPXKKFXXKGPXKGXKPKXGXXGGFFPXXPPPXXXPKKXXPPXXXGGXTPRGXXKK 839
GG P +G P GG P PPP PP G P
Sbjct: 1158 --GGPPAPP--PPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAP----PM 1209
Query: 840 XPGXXPGKNPXWGPLFXPXP 899
PG G P G P P
Sbjct: 1210 PPGVPGGPPPPPGGRGLPAP 1229
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/79 (30%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Frame = -1
Query: 820 GVXPPXXXGGXFFLGFXXG----GGXXGKNPPXXPXLGFXPFXGPXXKNFFXGXPPXXXX 653
GV PP GG LG G G PP G P P + G PP
Sbjct: 1147 GVPPPPPVGG---LGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPG 1203
Query: 652 XXXPPXXXXKTXPPPQXPG 596
PP PP PG
Sbjct: 1204 APAPPMPPGVPGGPPPPPG 1222
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.55
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = -2
Query: 669 PQXXGKXXXPPXXXXKPXPPPKXRGXGXFXGGKGXGPXKKXPXXXGGGGFXXXXKPPXPP 490
P K PP P PPP +G KG P P GG PP PP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG------PPPPP 381
Query: 489 P 487
P
Sbjct: 382 P 382
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 759 PPPXXXPKKXXPPXXXGGXTPRGXXKKXPGXXPGKNP 869
PPP PK PP G P K P P K P
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP 362
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = -1
Query: 670 PPXXXXXXXPPXXXXKTXPPPQXPGXXXFXGGXGXXXXKKXPXXPGGGGXFXXXKTPPXP 491
PP PP K PPP P G K P P G PP P
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPP-----KGPPPPPPAKGPPPPPPPKG----PSPPPPP 368
Query: 490 PXXGKK 473
P GKK
Sbjct: 369 PPGGKK 374
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 31.5 bits (68), Expect = 0.95
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 524 PPPPXXXGXFFXGPXPXPPXKXPXPRXLGGG 616
PPPP G GP P PP PR L GG
Sbjct: 627 PPPPGKPG----GPPPPPPRPGSLPRNLAGG 653
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 31.5 bits (68), Expect = 0.95
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 524 PPPPXXXGXFFXGPXPXPPXKXPXPRXLGGG 616
PPPP G GP P PP PR L GG
Sbjct: 932 PPPPGKPG----GPPPPPPPPGSLPRNLAGG 958
>07_01_0080 + 587674-588510
Length = 278
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 491 GGXGGFXXXKXPPPPXXXGXFFXGPXPXPPXKXPXP 598
GG G F PPPP P P PP P P
Sbjct: 83 GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPP 118
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 30.3 bits (65), Expect = 2.2
Identities = 31/108 (28%), Positives = 36/108 (33%), Gaps = 4/108 (3%)
Frame = -1
Query: 778 GFXXGGGXXGKNPPXXPXLGFXPFXGPXXKNFFXGXP-PXXXXXXXPP---XXXXKTXPP 611
GF GGG +P P GF PF +F G P P PP
Sbjct: 496 GFGFGGGFGMPDPFGVPR-GFPPFGPRFPGDFARGGPMPGMVFPGRPPQPGGMFPMGLEM 554
Query: 610 PQXPGXXXFXGGXGXXXXKKXPXXPGGGGXFXXXKTPPXPPXXGKKKK 467
PG GG G + P P G F PP P G K++
Sbjct: 555 MMGPGRGPLMGGLGMGGPGR-PNRPVGMAPF--MPPPPPPNNRGTKRE 599
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 491 GGXGGFXXXKXPPPPXXXGXFFXGPXPXPPXKXPXPR 601
G GF PPPP P P PP P PR
Sbjct: 255 GLPAGFPFLLRPPPPLPVPGVICRPPPSPPYFAPPPR 291
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = -3
Query: 686 FFSGXXPXFXXXPXXPXXXXXNPXPPPKXGGXGFXXGXRXXXPKKKXPXPXGGGXFXXGK 507
F + P F P P P PPP F P P P F
Sbjct: 231 FLTPPPPPFLPFPLPPIPFLTPPSPPPP--AFPFPLPPWPWAPPPAFPFPHLPPIFSPPS 288
Query: 506 NPPXPPP 486
PP PPP
Sbjct: 289 PPPPPPP 295
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 8/53 (15%)
Frame = -2
Query: 621 PXPPPKXRGXGX-FXGGKGXGPXKKX--PXXXG-----GGGFXXXXKPPXPPP 487
P PPPK + + GG G G K P G GG KPP PPP
Sbjct: 126 PPPPPKPKPCECTYCGGHGGGCNKPAVPPCAGGCSISDGGACGASCKPPPPPP 178
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 487 GGGXGGFXPXXKXPPPXGXGXFFXGXXXLXPXKXPXPP 600
GGG GGF P PPP P P PP
Sbjct: 23 GGGGGGFSPTAAKPPPPPSPRANGTAAAAKPSASPPPP 60
>11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920,
16794787-16796964,16797065-16797322,16799815-16800172
Length = 1530
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -3
Query: 560 PKKKX-PXPXGGGXFXXGKNPPXPPPXRXKK 471
PK+K P P GG PP PPP R K+
Sbjct: 1279 PKRKPWPLPWSGGVTSVCLIPPWPPPIRLKQ 1309
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 487 GGGXGGFXPXXKXPPPXGXGXFFXGXXXLXPXKXPXPPXFGGGXG 621
GGG GG + P G G + P P P GGG G
Sbjct: 93 GGGGGGGGSSMQQQQPGGGGGGVQQFGAVAPEMSPFSPAGGGGGG 137
>04_03_1022 - 21778315-21779007
Length = 230
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 491 GGXGGFXXXKXPPPPXXXGXFFXGPXPXPPXK 586
GG GG PPP ++ P P PP +
Sbjct: 107 GGHGGVPPYYPPPPVTPTPYYYPSPAPPPPSR 138
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 524 PPPPXXXGXFFXGPXPXPPXKXPXPRXLGGGXGF 625
PPPP FF P PP +GGG GF
Sbjct: 67 PPPPP--AAFFAAVPPPPPPPFEYYPAVGGGGGF 98
>10_08_0614 -
19238064-19238132,19238381-19238407,19238436-19238510,
19238637-19239317,19239423-19239554,19239676-19239723,
19239828-19239878,19240015-19240134,19241121-19241261,
19241701-19241865,19241981-19242160,19242314-19242445,
19242536-19242643,19242779-19242883,19243217-19243321,
19243407-19243463,19243991-19244010,19244299-19244377,
19245021-19245080,19245562-19245615,19246535-19246600,
19246938-19246990,19247361-19247450,19248152-19248249,
19248348-19248721
Length = 1029
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 476 FXXXGGGXGGFXXXKXPPPPXXXGXFFXGPXPXPPXKXPXP 598
F GGG GG P GP P PP P P
Sbjct: 58 FFGGGGGSGGGSRSTTPGRRGSSSSSLVGPVPSPPSPVPFP 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,559,074
Number of Sequences: 37544
Number of extensions: 424750
Number of successful extensions: 1778
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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