Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_C08
         (875 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D80002-1|BAA11497.2|  403|Homo sapiens KIAA0180 protein.              191   3e-48
AL121897-4|CAC16424.1|  388|Homo sapiens protein O-fucosyltransf...   191   3e-48
AF375884-1|AAL09576.1|  388|Homo sapiens protein o-fucosyltransf...   191   3e-48
BC000582-1|AAH00582.1|  194|Homo sapiens protein O-fucosyltransf...   173   5e-43
AL121897-3|CAH73300.1|  194|Homo sapiens protein O-fucosyltransf...   173   5e-43
AK123975-1|BAC85740.1|  487|Homo sapiens protein ( Homo sapiens ...    30   9.6  

>D80002-1|BAA11497.2|  403|Homo sapiens KIAA0180 protein.
          Length = 403

 Score =  191 bits (465), Expect = 3e-48
 Identities = 85/171 (49%), Positives = 119/171 (69%), Gaps = 5/171 (2%)
 Frame = +2

Query: 209 GYIAYCPCMGRFGNQADHFLGVLAFSKAVNRTLILPPWIEYRYGEP--RSIQVPFDTYFN 382
           GY+ YCPCMGRFGNQADHFLG LAF+K +NRTL +PPWIEY++ +P   ++ V +  YF 
Sbjct: 48  GYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFK 107

Query: 383 VDKLLEFANVITMEDFMREIAPTVWPIEKRVSFCY---TQRTGEIQNSCNAKSGNPFGPF 553
           ++ L  +  VI++EDFM ++APT WP EKRV++C+    QR+ + + +C  K GNPFGPF
Sbjct: 108 LEPLQAYHRVISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPD-KKTCPMKEGNPFGPF 166

Query: 554 WDTYNIDFNRSEFYAPLNYDAQNEKILEQWKIRYPVDKWPVLAFTGAPASF 706
           WD +++ FN+SE +  +++ A      EQW  R+   + PVLA  GAPA F
Sbjct: 167 WDQFHVSFNKSELFTGISFSASYR---EQWSQRFSPKEHPVLALPGAPAQF 214


>AL121897-4|CAC16424.1|  388|Homo sapiens protein
           O-fucosyltransferase 1 protein.
          Length = 388

 Score =  191 bits (465), Expect = 3e-48
 Identities = 85/171 (49%), Positives = 119/171 (69%), Gaps = 5/171 (2%)
 Frame = +2

Query: 209 GYIAYCPCMGRFGNQADHFLGVLAFSKAVNRTLILPPWIEYRYGEP--RSIQVPFDTYFN 382
           GY+ YCPCMGRFGNQADHFLG LAF+K +NRTL +PPWIEY++ +P   ++ V +  YF 
Sbjct: 33  GYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFK 92

Query: 383 VDKLLEFANVITMEDFMREIAPTVWPIEKRVSFCY---TQRTGEIQNSCNAKSGNPFGPF 553
           ++ L  +  VI++EDFM ++APT WP EKRV++C+    QR+ + + +C  K GNPFGPF
Sbjct: 93  LEPLQAYHRVISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPD-KKTCPMKEGNPFGPF 151

Query: 554 WDTYNIDFNRSEFYAPLNYDAQNEKILEQWKIRYPVDKWPVLAFTGAPASF 706
           WD +++ FN+SE +  +++ A      EQW  R+   + PVLA  GAPA F
Sbjct: 152 WDQFHVSFNKSELFTGISFSASYR---EQWSQRFSPKEHPVLALPGAPAQF 199


>AF375884-1|AAL09576.1|  388|Homo sapiens protein
           o-fucosyltransferase protein.
          Length = 388

 Score =  191 bits (465), Expect = 3e-48
 Identities = 85/171 (49%), Positives = 119/171 (69%), Gaps = 5/171 (2%)
 Frame = +2

Query: 209 GYIAYCPCMGRFGNQADHFLGVLAFSKAVNRTLILPPWIEYRYGEP--RSIQVPFDTYFN 382
           GY+ YCPCMGRFGNQADHFLG LAF+K +NRTL +PPWIEY++ +P   ++ V +  YF 
Sbjct: 33  GYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFK 92

Query: 383 VDKLLEFANVITMEDFMREIAPTVWPIEKRVSFCY---TQRTGEIQNSCNAKSGNPFGPF 553
           ++ L  +  VI++EDFM ++APT WP EKRV++C+    QR+ + + +C  K GNPFGPF
Sbjct: 93  LEPLQAYHRVISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPD-KKTCPMKEGNPFGPF 151

Query: 554 WDTYNIDFNRSEFYAPLNYDAQNEKILEQWKIRYPVDKWPVLAFTGAPASF 706
           WD +++ FN+SE +  +++ A      EQW  R+   + PVLA  GAPA F
Sbjct: 152 WDQFHVSFNKSELFTGISFSASYR---EQWSQRFSPKEHPVLALPGAPAQF 199


>BC000582-1|AAH00582.1|  194|Homo sapiens protein
           O-fucosyltransferase 1 protein.
          Length = 194

 Score =  173 bits (422), Expect = 5e-43
 Identities = 76/153 (49%), Positives = 108/153 (70%), Gaps = 5/153 (3%)
 Frame = +2

Query: 209 GYIAYCPCMGRFGNQADHFLGVLAFSKAVNRTLILPPWIEYRYGEP--RSIQVPFDTYFN 382
           GY+ YCPCMGRFGNQADHFLG LAF+K +NRTL +PPWIEY++ +P   ++ V +  YF 
Sbjct: 33  GYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFK 92

Query: 383 VDKLLEFANVITMEDFMREIAPTVWPIEKRVSFCY---TQRTGEIQNSCNAKSGNPFGPF 553
           ++ L  +  VI++EDFM ++APT WP EKRV++C+    QR+ + + +C  K GNPFGPF
Sbjct: 93  LEPLQAYHRVISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPD-KKTCPMKEGNPFGPF 151

Query: 554 WDTYNIDFNRSEFYAPLNYDAQNEKILEQWKIR 652
           WD +++ FN+SE +  +++ A      EQW  R
Sbjct: 152 WDQFHVSFNKSELFTGISFSASYR---EQWSQR 181


>AL121897-3|CAH73300.1|  194|Homo sapiens protein
           O-fucosyltransferase 1 protein.
          Length = 194

 Score =  173 bits (422), Expect = 5e-43
 Identities = 76/153 (49%), Positives = 108/153 (70%), Gaps = 5/153 (3%)
 Frame = +2

Query: 209 GYIAYCPCMGRFGNQADHFLGVLAFSKAVNRTLILPPWIEYRYGEP--RSIQVPFDTYFN 382
           GY+ YCPCMGRFGNQADHFLG LAF+K +NRTL +PPWIEY++ +P   ++ V +  YF 
Sbjct: 33  GYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFK 92

Query: 383 VDKLLEFANVITMEDFMREIAPTVWPIEKRVSFCY---TQRTGEIQNSCNAKSGNPFGPF 553
           ++ L  +  VI++EDFM ++APT WP EKRV++C+    QR+ + + +C  K GNPFGPF
Sbjct: 93  LEPLQAYHRVISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPD-KKTCPMKEGNPFGPF 151

Query: 554 WDTYNIDFNRSEFYAPLNYDAQNEKILEQWKIR 652
           WD +++ FN+SE +  +++ A      EQW  R
Sbjct: 152 WDQFHVSFNKSELFTGISFSASYR---EQWSQR 181


>AK123975-1|BAC85740.1|  487|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41981 fis, clone SMINT2011888, highly  similar
           to Protein Tro alpha1 H,myeloma. ).
          Length = 487

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 491 QRTGEIQNSCNAKSGNPFGPFWDTY--NIDFNRSEFYAPLNYDAQNEKILEQWKIRYPVD 664
           Q  G ++ SC A SG PF  FW T+         E+ A +N D ++   +E  K R+ + 
Sbjct: 32  QPGGSLRLSC-AASGFPFSSFWMTWVRQAPGKGLEWVASINKDGRDSYYVESVKGRFTIS 90

Query: 665 K 667
           +
Sbjct: 91  R 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,305,369
Number of Sequences: 237096
Number of extensions: 2547759
Number of successful extensions: 3861
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3848
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)