Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_C08
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41528-5|AAM51514.2| 389|Caenorhabditis elegans Hypothetical pr... 188 6e-48
DQ139948-1|ABA29469.1| 381|Caenorhabditis elegans putative prot... 161 8e-40
Z36282-1|CAD45602.1| 424|Caenorhabditis elegans Hypothetical pr... 37 0.022
AF455271-1|AAL65193.1| 424|Caenorhabditis elegans C21ORF80 prot... 37 0.022
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 28 0.16
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of... 30 1.9
Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical p... 29 4.4
AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin ... 29 4.4
AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like ... 29 4.4
>U41528-5|AAM51514.2| 389|Caenorhabditis elegans Hypothetical
protein C15C7.7 protein.
Length = 389
Score = 188 bits (457), Expect = 6e-48
Identities = 83/190 (43%), Positives = 125/190 (65%), Gaps = 6/190 (3%)
Frame = +2
Query: 176 SPVKSSNPEKKGYIAYCPCMGRFGNQADHFLGVLAFSKAVNRTLILPPWIEYRYGEPRSI 355
S KS+ + GYI +CPCMGRFGNQ D FLGVLAF+KA++RTL+LP +IE+++ P +
Sbjct: 19 SEAKSNETDPNGYIVFCPCMGRFGNQVDQFLGVLAFAKALDRTLVLPNFIEFKH--PETK 76
Query: 356 QVPFDTYFNVDKLLEFANVITMEDFMREIAPTVWPIEKRVSFCYTQRTGEIQNS----CN 523
+PF+ F V + ++ V+TM++F ++I PTVWP EKR +FC+T R S C+
Sbjct: 77 MIPFEFLFQVGTVAKYTRVVTMQEFTKKIMPTVWPPEKRKAFCWTPRQAIYDKSAEPGCH 136
Query: 524 AKSGNPFGPFWDTYNIDFNRSEFYA--PLNYDAQNEKILEQWKIRYPVDKWPVLAFTGAP 697
+K GNPFGP+WD ++ F E++ P +D ++W ++P +++PVLAF+ AP
Sbjct: 137 SKEGNPFGPYWDQIDVSFVGDEYFGDIPGGFDLNQMGSRKKWLEKFPSEEYPVLAFSSAP 196
Query: 698 ASFQYKKRMW 727
A F K ++W
Sbjct: 197 APFPSKGKVW 206
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 703 FPVQKENVDMQKYLKWSNDIEHRSKLFIKKXMS 801
FP + + +QKYL+WS+ I ++K FI ++
Sbjct: 199 FPSKGKVWSIQKYLRWSSRITEQAKKFISANLA 231
>DQ139948-1|ABA29469.1| 381|Caenorhabditis elegans putative protein
O-fucosyltransferase1 protein.
Length = 381
Score = 161 bits (390), Expect = 8e-40
Identities = 74/186 (39%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Frame = +2
Query: 176 SPVKSSNPEKKGYIAYCPCMGRFGNQADHFLGVLAFSKAVNRTLILPPWIEYRYGEPRSI 355
S KS+ + GYI +CPCMGRFGNQ D FLGVLAF+KA++RTL+LP +IE+++ P +
Sbjct: 19 SEAKSNETDPNGYIVFCPCMGRFGNQVDQFLGVLAFAKALDRTLVLPNFIEFKH--PETK 76
Query: 356 QVPFDTYFNVDKLLEFANVITMEDFMREIAPTVWPIEKRVSFCYTQRTGEIQNSCNAKSG 535
+PF+ F V + ++ V+TM++F ++I PT + R + Y + + C++K G
Sbjct: 77 MIPFEFLFQVGTVAKYTRVVTMQEFTKKIMPTHFVGTPRQAI-YDK---SAEPGCHSKEG 132
Query: 536 NPFGPFWDTYNIDFNRSEFYA--PLNYDAQNEKILEQWKIRYPVDKWPVLAFTGAPASFQ 709
NPFGP+WD ++ F E++ P +D ++W ++P +++PVLAF+ APA F
Sbjct: 133 NPFGPYWDQIDVSFVGDEYFGDIPGGFDLNQMGSRKKWLEKFPSEEYPVLAFSSAPAPFP 192
Query: 710 YKKRMW 727
K ++W
Sbjct: 193 SKGKVW 198
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 703 FPVQKENVDMQKYLKWSNDIEHRSKLFIKKXMS 801
FP + + +QKYL+WS+ I ++K FI ++
Sbjct: 191 FPSKGKVWSIQKYLRWSSRITEQAKKFISANLA 223
>Z36282-1|CAD45602.1| 424|Caenorhabditis elegans Hypothetical
protein K10G9.3 protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 296 NRTLILPPWIEYRYGEPRSIQVPFDTYFNVDKLLEFANVITMEDFMREIAP 448
N L+LPPW + + + + + +F+++ L F VI EDF+ E P
Sbjct: 77 NYILVLPPWGRLHHWKRMEVALSWRLFFDLESLNRFIPVIEFEDFLDENRP 127
>AF455271-1|AAL65193.1| 424|Caenorhabditis elegans C21ORF80
protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 296 NRTLILPPWIEYRYGEPRSIQVPFDTYFNVDKLLEFANVITMEDFMREIAP 448
N L+LPPW + + + + + +F+++ L F VI EDF+ E P
Sbjct: 77 NYILVLPPWGRLHHWKRMEVALSWRLFFDLESLNRFIPVIEFEDFLDENRP 127
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 28.3 bits (60), Expect(2) = 0.16
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -2
Query: 571 YIVSIPKGSKWITRFSITTVLYFTCPLSVAKRDSLFYRPYCWCNFSHEIFHCYNISK 401
+ S PKG +T + I T + + + + + S Y W +F YNIS+
Sbjct: 1262 FFESAPKGFMMVTMYHILTGMIGSIAVPIISQTSSLDAGYLWSIIFAWLFPTYNISQ 1318
Score = 24.2 bits (50), Expect(2) = 0.16
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -2
Query: 775 LICVQYHYSILNISAYPHS---LFVLETSWSTSKG*NRPFINWIPYF 644
++C + I NI+AY H + +L S+ PF W +F
Sbjct: 1216 ILCFDAIFYIFNITAYTHDFGVMLILTLSFLLYGWTALPFTYWFQFF 1262
>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
constitutive dauerformation protein 2 protein.
Length = 1446
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -2
Query: 556 PKGSKWITRFSITTVLYFTCPLSVAKRDSLF-YRPYCWCNFSHEIFHCYN 410
P GS +T CP S + F Y P+C CN EI+ YN
Sbjct: 870 PDGSN-VTDTEEACAFPLVCPSSSTNQYRNFTYEPFCLCNNGKEIYDVYN 918
>Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 533 GNPFGPFWDTYNIDFNRSEFYAPLNYDAQNEKIL 634
G FGPF+ TY+ D + E Y+ L +Q +K++
Sbjct: 49 GKSFGPFFRTYDPDTTQEEIYSDL-VSSQIKKVI 81
>Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 533 GNPFGPFWDTYNIDFNRSEFYAPLNYDAQNEKIL 634
G FGPF+ TY+ D + E Y+ L +Q +K++
Sbjct: 49 GKSFGPFFRTYDPDTTQEEIYSDL-VSSQIKKVI 81
>AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin
BMK-1 protein.
Length = 958
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 533 GNPFGPFWDTYNIDFNRSEFYAPLNYDAQNEKIL 634
G FGPF+ TY+ D + E Y+ L +Q +K++
Sbjct: 49 GKSFGPFFRTYDPDTTQEEIYSDL-VSSQIKKVI 81
>AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like
protein KLP-14 protein.
Length = 958
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 533 GNPFGPFWDTYNIDFNRSEFYAPLNYDAQNEKIL 634
G FGPF+ TY+ D + E Y+ L +Q +K++
Sbjct: 49 GKSFGPFFRTYDPDTTQEEIYSDL-VSSQIKKVI 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,734,368
Number of Sequences: 27780
Number of extensions: 418447
Number of successful extensions: 989
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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