Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_C04
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0654 - 12662931-12663200,12663296-12663550,12664097-126642...    30   2.1  
07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,127...    29   4.9  
12_01_0120 + 912312-912615,913145-913371,913507-913754,914293-91...    29   6.5  
11_01_0112 + 875447-875490,875854-876359,876750-876976,877112-87...    29   6.5  
02_05_1278 - 35416451-35416458,35416777-35416969,35416970-354170...    28   8.6  
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121...    28   8.6  

>02_02_0654 - 12662931-12663200,12663296-12663550,12664097-12664268,
            12664354-12664581,12664727-12664860,12665018-12665101,
            12665332-12665538,12665641-12665973,12666175-12666281,
            12666439-12666593,12666778-12666810,12666924-12666972,
            12667152-12667312,12667413-12668313,12668391-12668481,
            12668558-12668749
          Length = 1123

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -1

Query: 304  YFLLSSFSIFLVNDESLVKSSTIALYSSIFIGFVCPAWKSI--FILNNKCI 158
            +F++SSF+ F      LV  +  AL ++I I F  P W     F++  K I
Sbjct: 986  FFIVSSFNYFTFFGMMLVACTPSALLANILITFALPLWNLFAGFLIFRKAI 1036


>07_01_0181 +
           1274177-1274200,1274335-1276161,1276519-1277448,
           1278314-1278367
          Length = 944

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 226 NTMQ*WKILLNFHHSLEKWKTNLKENIVIYNLIPWGVSY 342
           N+++ WK+L N  H LE  K  +KE  +   L+ +   Y
Sbjct: 711 NSLEIWKLLRNKEHVLEMLKLKIKEEALRTYLLSYSSCY 749


>12_01_0120 +
           912312-912615,913145-913371,913507-913754,914293-914656,
           914758-915154,915671-915693,916645-916987,917513-917532,
           918418-918527,919484-920255
          Length = 935

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 540 ISKKYIKDTTLIDNKDLAYQVFMGIMNDNQYGPYADVTKQ 659
           ISKKY  D++   NKDL + +  G    ++ GP+A  T +
Sbjct: 284 ISKKYEHDSSTSVNKDLLHSIIQG----SKDGPFASCTPE 319


>11_01_0112 +
           875447-875490,875854-876359,876750-876976,877112-877237,
           877313-877359,877888-878251,878396-878779
          Length = 565

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 540 ISKKYIKDTTLIDNKDLAYQVFMGIMNDNQYGPYADVTKQ 659
           ISKKY  D++   NKDL + +  G    ++ GP+A  T +
Sbjct: 341 ISKKYEHDSSTSVNKDLLHSIIQG----SKDGPFASCTPE 376


>02_05_1278 -
           35416451-35416458,35416777-35416969,35416970-35417056,
           35417851-35417892,35418542-35418617,35418954-35421589
          Length = 1013

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 216 KIEEYNAIVEDFTKLSSFTRKME--NELKRKYCHIQPHTLGSIIS 344
           K+  YNA++ DFTK    T+  E   +++++  H    T   ++S
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877


>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
            1216413-1216738,1216860-1217013,1217377-1217438,
            1218078-1218133,1219456-1221279,1221775-1222698,
            1222855-1222866
          Length = 1242

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 226  NTMQ*WKILLNFHHSLEKWKTNLKENIVIYNLIPWGVSY 342
            N+++ WK+L N  H LE  K  +KE  +   L  +   Y
Sbjct: 1025 NSLEIWKLLRNKEHVLEMLKLKIKEEALRTYLFSYSSCY 1063


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,889,792
Number of Sequences: 37544
Number of extensions: 293962
Number of successful extensions: 655
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)