BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_C04
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006254-1|AAH06254.1| 183|Homo sapiens C15orf41 protein protein. 98 4e-20
AF114263-1|AAD29606.1| 183|Homo sapiens unknown protein. 98 4e-20
BC056152-1|AAH56152.1| 622|Homo sapiens zinc finger, DHHC-type ... 32 2.4
BC050690-1|AAH50690.2| 492|Homo sapiens zinc finger, DHHC-type ... 32 2.4
BC036020-1|AAH36020.1| 622|Homo sapiens zinc finger, DHHC-type ... 32 2.4
AK001831-1|BAA91930.1| 446|Homo sapiens protein ( Homo sapiens ... 32 2.4
AK001714-1|BAA91856.1| 481|Homo sapiens protein ( Homo sapiens ... 32 2.4
AB097027-1|BAC77380.1| 622|Homo sapiens putative MAPK activatin... 32 2.4
AB097014-1|BAC77367.1| 622|Homo sapiens putative NFkB activatin... 32 2.4
AB024495-1|BAC22090.1| 622|Homo sapiens huntingtin interacting ... 32 2.4
>BC006254-1|AAH06254.1| 183|Homo sapiens C15orf41 protein protein.
Length = 183
Score = 97.9 bits (233), Expect = 4e-20
Identities = 48/111 (43%), Positives = 68/111 (61%)
Frame = +3
Query: 537 TISKKYIKDTTLIDNKDLAYQVFMGIMNDNQYGPYADVTKQSIGXXXXXXXXXXXXXMNI 716
+I ++D + I + LA QV+ I+ND YGP D K +IG N+
Sbjct: 21 SIINSMLRDPSQIPDGVLANQVYQCIVNDCCYGPLVDCIKHAIGHEHEVLLRDLLLEKNL 80
Query: 717 TFSDENVLRSRGYDKTPDFKLDVPIAVDGFVINXVESKALFGDEXNHLXFL 869
+F DE+ LR++GYDKTPDF L VP+AV+G +I+ +ESKA FGDE +H +L
Sbjct: 81 SFLDEDQLRAKGYDKTPDFILQVPVAVEGHIIHWIESKASFGDECSHHAYL 131
>AF114263-1|AAD29606.1| 183|Homo sapiens unknown protein.
Length = 183
Score = 97.9 bits (233), Expect = 4e-20
Identities = 48/111 (43%), Positives = 68/111 (61%)
Frame = +3
Query: 537 TISKKYIKDTTLIDNKDLAYQVFMGIMNDNQYGPYADVTKQSIGXXXXXXXXXXXXXMNI 716
+I ++D + I + LA QV+ I+ND YGP D K +IG N+
Sbjct: 21 SIINSMLRDPSQIPDGVLANQVYQCIVNDCCYGPLVDCIKHAIGHEHEVLLRDLLLEKNL 80
Query: 717 TFSDENVLRSRGYDKTPDFKLDVPIAVDGFVINXVESKALFGDEXNHLXFL 869
+F DE+ LR++GYDKTPDF L VP+AV+G +I+ +ESKA FGDE +H +L
Sbjct: 81 SFLDEDQLRAKGYDKTPDFILQVPVAVEGHIIHWIESKASFGDECSHHAYL 131
>BC056152-1|AAH56152.1| 622|Homo sapiens zinc finger, DHHC-type
containing 13 protein.
Length = 622
Score = 32.3 bits (70), Expect = 2.4
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 358 LCINNDMILPKV*GC--I*QYFLLSSFSIFLVNDESLVKSSTIALYSSIFIGFVCPAWKS 185
L N+D L K GC + +FL S F FLV ++LV T L SS+F ++ W
Sbjct: 310 LDFNSDSWLLK--GCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVF--WIFMTWFI 365
Query: 184 IFILNNKCIIYYFSLIIVI 128
+F + +YFS I I
Sbjct: 366 LFFPDLAGAPFYFSFIFSI 384
>BC050690-1|AAH50690.2| 492|Homo sapiens zinc finger, DHHC-type
containing 13 protein.
Length = 492
Score = 32.3 bits (70), Expect = 2.4
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 358 LCINNDMILPKV*GC--I*QYFLLSSFSIFLVNDESLVKSSTIALYSSIFIGFVCPAWKS 185
L N+D L K GC + +FL S F FLV ++LV T L SS+F ++ W
Sbjct: 180 LDFNSDSWLLK--GCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVF--WIFMTWFI 235
Query: 184 IFILNNKCIIYYFSLIIVI 128
+F + +YFS I I
Sbjct: 236 LFFPDLAGAPFYFSFIFSI 254
>BC036020-1|AAH36020.1| 622|Homo sapiens zinc finger, DHHC-type
containing 13 protein.
Length = 622
Score = 32.3 bits (70), Expect = 2.4
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 358 LCINNDMILPKV*GC--I*QYFLLSSFSIFLVNDESLVKSSTIALYSSIFIGFVCPAWKS 185
L N+D L K GC + +FL S F FLV ++LV T L SS+F ++ W
Sbjct: 310 LDFNSDSWLLK--GCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVF--WIFMTWFI 365
Query: 184 IFILNNKCIIYYFSLIIVI 128
+F + +YFS I I
Sbjct: 366 LFFPDLAGAPFYFSFIFSI 384
>AK001831-1|BAA91930.1| 446|Homo sapiens protein ( Homo sapiens
cDNA FLJ10969 fis, clone PLACE1000909, weakly similar to
ANKYRIN REPEAT-CONTAINING PROTEIN AKR1. ).
Length = 446
Score = 32.3 bits (70), Expect = 2.4
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 358 LCINNDMILPKV*GC--I*QYFLLSSFSIFLVNDESLVKSSTIALYSSIFIGFVCPAWKS 185
L N+D L K GC + +FL S F FLV ++LV T L SS+F ++ W
Sbjct: 134 LDFNSDSWLLK--GCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVF--WIFMTWFI 189
Query: 184 IFILNNKCIIYYFSLIIVI 128
+F + +YFS I I
Sbjct: 190 LFFPDLAGAPFYFSFIFSI 208
>AK001714-1|BAA91856.1| 481|Homo sapiens protein ( Homo sapiens
cDNA FLJ10852 fis, clone NT2RP4001498, weakly similar to
ANKYRIN REPEAT-CONTAINING PROTEIN AKR1. ).
Length = 481
Score = 32.3 bits (70), Expect = 2.4
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 358 LCINNDMILPKV*GC--I*QYFLLSSFSIFLVNDESLVKSSTIALYSSIFIGFVCPAWKS 185
L N+D L K GC + +FL S F FLV ++LV T L SS+F ++ W
Sbjct: 310 LDFNSDSWLLK--GCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVF--WIFMTWFI 365
Query: 184 IFILNNKCIIYYFSLIIVI 128
+F + +YFS I I
Sbjct: 366 LFFPDLAGAPFYFSFIFSI 384
>AB097027-1|BAC77380.1| 622|Homo sapiens putative MAPK activating
protein protein.
Length = 622
Score = 32.3 bits (70), Expect = 2.4
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 358 LCINNDMILPKV*GC--I*QYFLLSSFSIFLVNDESLVKSSTIALYSSIFIGFVCPAWKS 185
L N+D L K GC + +FL S F FLV ++LV T L SS+F ++ W
Sbjct: 310 LDFNSDSWLLK--GCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVF--WIFMTWFI 365
Query: 184 IFILNNKCIIYYFSLIIVI 128
+F + +YFS I I
Sbjct: 366 LFFPDLAGAPFYFSFIFSI 384
>AB097014-1|BAC77367.1| 622|Homo sapiens putative NFkB activating
protein protein.
Length = 622
Score = 32.3 bits (70), Expect = 2.4
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 358 LCINNDMILPKV*GC--I*QYFLLSSFSIFLVNDESLVKSSTIALYSSIFIGFVCPAWKS 185
L N+D L K GC + +FL S F FLV ++LV T L SS+F ++ W
Sbjct: 310 LDFNSDSWLLK--GCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVF--WIFMTWFI 365
Query: 184 IFILNNKCIIYYFSLIIVI 128
+F + +YFS I I
Sbjct: 366 LFFPDLAGAPFYFSFIFSI 384
>AB024495-1|BAC22090.1| 622|Homo sapiens huntingtin interacting
protein HIP3RP protein.
Length = 622
Score = 32.3 bits (70), Expect = 2.4
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 358 LCINNDMILPKV*GC--I*QYFLLSSFSIFLVNDESLVKSSTIALYSSIFIGFVCPAWKS 185
L N+D L K GC + +FL S F FLV ++LV T L SS+F ++ W
Sbjct: 310 LDFNSDSWLLK--GCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVF--WIFMTWFI 365
Query: 184 IFILNNKCIIYYFSLIIVI 128
+F + +YFS I I
Sbjct: 366 LFFPDLAGAPFYFSFIFSI 384
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,116,309
Number of Sequences: 237096
Number of extensions: 1715182
Number of successful extensions: 6309
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6308
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -