Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_C04
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061083-1|AAL28631.1|  329|Drosophila melanogaster LD07058p pro...    91   2e-18
AE014296-2582|AAF49577.2|  329|Drosophila melanogaster CG12713-P...    91   2e-18
AE014297-2053|AAF55204.2| 2183|Drosophila melanogaster CG5205-PA...    30   4.9  

>AY061083-1|AAL28631.1|  329|Drosophila melanogaster LD07058p
           protein.
          Length = 329

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
 Frame = +3

Query: 225 EYNAIVEDFTKLSSFTRKMENELKRKYCH-IQPHTLGSII-SLLIQRSMKQNYRKSPAIS 398
           EYN I              E EL+ ++   ++P  L  I+ S L  RS  + + K     
Sbjct: 24  EYNKICRFINGFHGLAIDCEFELRNRFFRDVEPMALTCILQSELFNRS--RGHWKQDQRG 81

Query: 399 SKYQELYEVAMRDDTKENVILKLSESQGISPALFARSLLQGVFSDSTIS--KKYIKDTTL 572
            +  + YE          ++++++ ++ ++P    R LLQ  + D   S   + ++   L
Sbjct: 82  KRLLKAYEEQKNLYYDNALLIRMACAEALNPVALCRMLLQEKYKDRHRSHISQLLRHPHL 141

Query: 573 IDNKDLAYQVFMGIMNDNQYGPYADVTKQSIGXXXXXXXXXXXXXMNITFSDENVLRSRG 752
           ID+  LA  V   I++DNQ G   D+ ++ +G               I F DE  LR  G
Sbjct: 142 IDDPKLAANVQQCIVSDNQEGSITDLRRRIVGEEYELKLKNLAKEAGIHFYDEKDLRRMG 201

Query: 753 YDKTPDFKLDVPIAVDGFVINXVESKALFGDEXNH 857
           YDKTPD K+ +P    G VIN +ESKA FGD   H
Sbjct: 202 YDKTPDIKMILPFLYKGSVINWIESKANFGDTKGH 236


>AE014296-2582|AAF49577.2|  329|Drosophila melanogaster CG12713-PA
           protein.
          Length = 329

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
 Frame = +3

Query: 225 EYNAIVEDFTKLSSFTRKMENELKRKYCH-IQPHTLGSII-SLLIQRSMKQNYRKSPAIS 398
           EYN I              E EL+ ++   ++P  L  I+ S L  RS  + + K     
Sbjct: 24  EYNKICRFINGFHGLAIDCEFELRNRFFRDVEPMALTCILQSELFNRS--RGHWKQDQRG 81

Query: 399 SKYQELYEVAMRDDTKENVILKLSESQGISPALFARSLLQGVFSDSTIS--KKYIKDTTL 572
            +  + YE          ++++++ ++ ++P    R LLQ  + D   S   + ++   L
Sbjct: 82  KRLLKAYEEQKNLYYDNALLIRMACAEALNPVALCRMLLQEKYKDRHRSHISQLLRHPHL 141

Query: 573 IDNKDLAYQVFMGIMNDNQYGPYADVTKQSIGXXXXXXXXXXXXXMNITFSDENVLRSRG 752
           ID+  LA  V   I++DNQ G   D+ ++ +G               I F DE  LR  G
Sbjct: 142 IDDPKLAANVQQCIVSDNQEGSITDLRRRIVGEEYELKLKNLAKEAGIHFYDEKDLRRMG 201

Query: 753 YDKTPDFKLDVPIAVDGFVINXVESKALFGDEXNH 857
           YDKTPD K+ +P    G VIN +ESKA FGD   H
Sbjct: 202 YDKTPDIKMILPFLYKGSVINWIESKANFGDTKGH 236


>AE014297-2053|AAF55204.2| 2183|Drosophila melanogaster CG5205-PA
            protein.
          Length = 2183

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
 Frame = +3

Query: 243  EDFTKLSSFTRKME--NELKRKYCHIQPH----TLGSIISLLIQRSMKQNYRKSPAISS 401
            ++F +L     +ME  +ELK  YC I+P+     +   +++LIQ  +   Y KS ++SS
Sbjct: 1029 QEFQQLKVRDDEMEELDELKNAYCKIKPYGGSENVHGKVNILIQTYLSNGYVKSFSLSS 1087


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,386,387
Number of Sequences: 53049
Number of extensions: 548734
Number of successful extensions: 1657
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)