Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_B24
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313...    30   2.2  
08_02_0534 + 18285477-18285689,18286189-18286348,18287924-182881...    30   2.9  
08_02_0544 + 18445810-18445995,18446894-18447053,18448186-184483...    29   5.1  
12_01_1035 + 10656345-10656347,10656694-10656864,10656922-106577...    29   6.7  
05_03_0313 + 12200743-12200955,12201238-12201622,12201997-122022...    29   6.7  
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388...    29   6.7  
10_02_0066 + 4871759-4871857,4872086-4872511                           28   8.9  

>05_01_0397 -
           3129679-3130144,3130655-3131104,3132215-3132273,
           3133136-3133305,3134655-3134771,3134980-3135166
          Length = 482

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 550 SIHNCSQLKLPIA*WDLPVNHSKWHAIAGVGVKAPVESSLPCDLY 416
           S+ + S   +P    D P  H  WH +AG     P++S  P D +
Sbjct: 229 SLASSSSSHVPERTMDGPAYHDPWHPLAGPSDGRPLQSVQPADFH 273


>08_02_0534 +
           18285477-18285689,18286189-18286348,18287924-18288124,
           18288216-18288280,18288465-18288492,18288568-18288629,
           18288885-18288971,18289310-18289360,18289663-18289884,
           18291148-18291241,18291349-18291489,18291587-18291672
          Length = 469

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 680 NYSEKLSDYFWVATVLKVKGYMGLLRYEGFG 772
           NY    S ++WV  +L++   +G+  YEG G
Sbjct: 273 NYMPTCSTWYWVLNLLQIPVSVGVTMYEGLG 303


>08_02_0544 +
           18445810-18445995,18446894-18447053,18448186-18448386,
           18448474-18448538,18448697-18448761,18448784-18448874,
           18448965-18449051,18449204-18449254,18449604-18449825,
           18449987-18450080,18450159-18450299,18450391-18450476
          Length = 482

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 680 NYSEKLSDYFWVATVLKVKGYMGLLRYEGFG 772
           NY    S ++WV   L++   +G+  YEG G
Sbjct: 286 NYMPTCSTWYWVLNFLQIPVSVGVTMYEGLG 316


>12_01_1035 +
           10656345-10656347,10656694-10656864,10656922-10657728,
           10657881-10659092
          Length = 730

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 271 DSFAICELCGRVGRRGQFYPRNNKFCSLRCN 363
           DS   CE+CG  G  G   P+  +     CN
Sbjct: 272 DSHVTCEVCGGTGHSGNDCPKTREKAMYMCN 302


>05_03_0313 +
           12200743-12200955,12201238-12201622,12201997-12202274,
           12202359-12202976
          Length = 497

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 271 DSFAICELCGRVGRRGQFYPRNNK 342
           DS   CE+CG  G  G  YP   +
Sbjct: 161 DSHVTCEVCGNTGHSGNDYPETRE 184


>02_04_0624 +
           24538095-24538183,24538429-24538612,24538725-24538886,
           24538988-24539225,24539301-24539370,24539439-24539530,
           24539799-24539836,24540018-24540039,24540462-24540618,
           24540702-24540753,24542144-24542207,24542279-24542362,
           24543418-24543543,24543622-24543818,24543903-24544091,
           24544186-24544434,24544507-24544556,24544977-24545059,
           24545164-24545449,24545751-24545794,24545878-24546626
          Length = 1074

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
 Frame = +1

Query: 340 KFCSLRCNASFSRRKHINWRFKLMEGTDHMAGMIPLEPLPQ--LQQWHATLSDLQAGPIK 513
           + C LR     SR     WRF L++GT     + P++ L Q  L+ W+  L  L    ++
Sbjct: 65  ELCILRL---LSRFLSSEWRFNLIKGTLKTIYIAPMKALVQEKLRDWNMKLGSLGISCLE 121

Query: 514 QSAASVANSYEWKDELFGCDFLXCTSESFQT 606
            +     N +     +   D +  T E F +
Sbjct: 122 MTG---DNEFYNTKSIHDADLILTTPEKFDS 149


>10_02_0066 + 4871759-4871857,4872086-4872511
          Length = 174

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 271 DSFAICELCGRVGRRGQFYPRNNK 342
           DS   CE+CG  G  G  YP   +
Sbjct: 140 DSHITCEVCGNTGHMGNDYPETRE 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,955,925
Number of Sequences: 37544
Number of extensions: 467747
Number of successful extensions: 1076
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)