Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_B24
         (910 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT006011-1|AAO74694.1| 1220|Drosophila melanogaster LD14884p pro...    93   5e-19
AE014134-2287|AAF53250.2|  868|Drosophila melanogaster CG16975-P...    93   5e-19
AE014134-2286|AAF53249.2| 1220|Drosophila melanogaster CG16975-P...    93   5e-19

>BT006011-1|AAO74694.1| 1220|Drosophila melanogaster LD14884p
           protein.
          Length = 1220

 Score = 93.1 bits (221), Expect = 5e-19
 Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
 Frame = +2

Query: 584 APVSLFKHAPLHEMWDNTFEGMKVEVKNTDCDNYS----EKLSDYFWVATVLKVKGYMGL 751
           APV+ F HAP  E+WDN   GMKVEV+NTDCD+       +    FWVAT+L++KGY  L
Sbjct: 550 APVTCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKAL 609

Query: 752 LRYEGFGSDDSKDFGVNLCCQKSSSWLVCYTR-QTLIP 862
           + YEGF + DS DF VNLC  +  S   C TR + LIP
Sbjct: 610 MSYEGFDT-DSHDFWVNLCNAEVHSVGWCATRGKPLIP 646



 Score = 40.7 bits (91), Expect = 0.003
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 268 KDSFAICELCGRVGRRGQFYPRNNKFCSLRC 360
           KD  A+C+ CG +G +  FY ++ +FCS+ C
Sbjct: 325 KDGMAVCKRCGAIGVKHTFYTKSRRFCSMAC 355


>AE014134-2287|AAF53250.2|  868|Drosophila melanogaster CG16975-PA,
           isoform A protein.
          Length = 868

 Score = 93.1 bits (221), Expect = 5e-19
 Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
 Frame = +2

Query: 584 APVSLFKHAPLHEMWDNTFEGMKVEVKNTDCDNYS----EKLSDYFWVATVLKVKGYMGL 751
           APV+ F HAP  E+WDN   GMKVEV+NTDCD+       +    FWVAT+L++KGY  L
Sbjct: 198 APVTCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKAL 257

Query: 752 LRYEGFGSDDSKDFGVNLCCQKSSSWLVCYTR-QTLIP 862
           + YEGF + DS DF VNLC  +  S   C TR + LIP
Sbjct: 258 MSYEGFDT-DSHDFWVNLCNAEVHSVGWCATRGKPLIP 294


>AE014134-2286|AAF53249.2| 1220|Drosophila melanogaster CG16975-PB,
           isoform B protein.
          Length = 1220

 Score = 93.1 bits (221), Expect = 5e-19
 Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
 Frame = +2

Query: 584 APVSLFKHAPLHEMWDNTFEGMKVEVKNTDCDNYS----EKLSDYFWVATVLKVKGYMGL 751
           APV+ F HAP  E+WDN   GMKVEV+NTDCD+       +    FWVAT+L++KGY  L
Sbjct: 550 APVTCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKAL 609

Query: 752 LRYEGFGSDDSKDFGVNLCCQKSSSWLVCYTR-QTLIP 862
           + YEGF + DS DF VNLC  +  S   C TR + LIP
Sbjct: 610 MSYEGFDT-DSHDFWVNLCNAEVHSVGWCATRGKPLIP 646



 Score = 40.7 bits (91), Expect = 0.003
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 268 KDSFAICELCGRVGRRGQFYPRNNKFCSLRC 360
           KD  A+C+ CG +G +  FY ++ +FCS+ C
Sbjct: 325 KDGMAVCKRCGAIGVKHTFYTKSRRFCSMAC 355


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,984,309
Number of Sequences: 53049
Number of extensions: 816385
Number of successful extensions: 1954
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1945
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)