Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_B21
(875 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 227 2e-59
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 227 2e-59
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 225 5e-59
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 221 1e-57
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 57 3e-08
AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p pro... 29 6.4
AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like p... 29 6.4
AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-P... 29 6.4
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 227 bits (555), Expect = 2e-59
Identities = 104/136 (76%), Positives = 119/136 (87%)
Frame = +1
Query: 82 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 261
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 262 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 441
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 442 ARDYDALDVANKIGII 489
ARDYDALD+ANKIGII
Sbjct: 254 ARDYDALDIANKIGII 269
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 227 bits (555), Expect = 2e-59
Identities = 104/136 (76%), Positives = 119/136 (87%)
Frame = +1
Query: 82 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 261
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 262 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 441
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 442 ARDYDALDVANKIGII 489
ARDYDALD+ANKIGII
Sbjct: 262 ARDYDALDIANKIGII 277
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 225 bits (551), Expect = 5e-59
Identities = 104/136 (76%), Positives = 118/136 (86%)
Frame = +1
Query: 82 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 261
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 262 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 441
LT+EAAMKKIEDNNTLVF+ H ANK H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 442 ARDYDALDVANKIGII 489
ARDYDALD+ANKIGII
Sbjct: 262 ARDYDALDIANKIGII 277
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 221 bits (539), Expect = 1e-57
Identities = 103/136 (75%), Positives = 118/136 (86%)
Frame = +1
Query: 82 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 261
A K Q+K++K G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 262 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 441
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 442 ARDYDALDVANKIGII 489
ARDYDALD+ANKIGII
Sbjct: 254 ARDYDALDIANKIGII 269
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 57.2 bits (132), Expect = 3e-08
Identities = 33/102 (32%), Positives = 52/102 (50%)
Frame = +3
Query: 198 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCPYKCKQAPYQGCSQETL*Y 377
+P+E+ A ++ HG +QHH +P+ +EED QH GL +Q P S + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222
Query: 378 KCC*SQHSHQA*W*EESVXXXXXXXXXIGRCQQNWHHINCSI 503
+ + +H A W EE + G CQQ+ HHI+ +I
Sbjct: 223 QGGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264
>AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p protein.
Length = 1010
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +1
Query: 52 QKKVVKPVTKALKAQRKVVKGEHGKRVRK------IRNSVHFRRPKTFEPPRHPKYPRKS 213
++ ++ + K ++ + +V+ RVR+ I+N +H + EPP HP+ KS
Sbjct: 898 EEVLINRLVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAHPRSADKS 957
Query: 214 LPKRNRMD 237
K ++ +
Sbjct: 958 SKKLSKKE 965
>AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like
protein protein.
Length = 1010
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +1
Query: 52 QKKVVKPVTKALKAQRKVVKGEHGKRVRK------IRNSVHFRRPKTFEPPRHPKYPRKS 213
++ ++ + K ++ + +V+ RVR+ I+N +H + EPP HP+ KS
Sbjct: 898 EEVLINRLVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAHPRSADKS 957
Query: 214 LPKRNRMD 237
K ++ +
Sbjct: 958 SKKLSKKE 965
>AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-PA
protein.
Length = 1010
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +1
Query: 52 QKKVVKPVTKALKAQRKVVKGEHGKRVRK------IRNSVHFRRPKTFEPPRHPKYPRKS 213
++ ++ + K ++ + +V+ RVR+ I+N +H + EPP HP+ KS
Sbjct: 898 EEVLINRLVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAHPRSADKS 957
Query: 214 LPKRNRMD 237
K ++ +
Sbjct: 958 SKKLSKKE 965
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,101,076
Number of Sequences: 53049
Number of extensions: 566801
Number of successful extensions: 1602
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -