Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_B21
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal prote... 174 8e-44
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 173 1e-43
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 31 1.4
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 31 1.4
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 31 1.4
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 30 2.5
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical ... 29 3.3
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 29 4.4
AC024797-3|AAF60706.1| 112|Caenorhabditis elegans Hypothetical ... 29 4.4
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 5.8
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 29 5.8
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 29 5.8
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 5.8
AL117193-11|CAB55000.1| 174|Caenorhabditis elegans Hypothetical... 28 7.6
>U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 25.1 protein.
Length = 147
Score = 174 bits (423), Expect = 8e-44
Identities = 84/137 (61%), Positives = 105/137 (76%)
Frame = +1
Query: 79 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 258
KAL A++KVVKG+ R++R SVHFRRP T + R ++PRKS PK ++MD + II+
Sbjct: 11 KALDAKKKVVKGKRTTHRRQVRTSVHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQH 70
Query: 259 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 438
PLT+E+AMKKIE++NTLVFIV ANK+ IK AV KLY++ KVNTLI P +KKAYVR
Sbjct: 71 PLTTESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVR 130
Query: 439 LARDYDALDVANKIGII 489
L DYDALDVANKIG+I
Sbjct: 131 LTADYDALDVANKIGVI 147
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 173 bits (421), Expect = 1e-43
Identities = 84/139 (60%), Positives = 104/139 (74%)
Frame = +1
Query: 73 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 252
V KA++A++ VVKG + +R SVHFRRPKT R P+Y RKS P R+++D++ +I
Sbjct: 8 VGKAIQAKKAVVKGSKTNVRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDSFAVI 67
Query: 253 KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 432
K P T+E++MKKIED+NTLVFIV ANKHHIK AV LY++ KVNTLI P +KKAY
Sbjct: 68 KAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITPLQQKKAY 127
Query: 433 VRLARDYDALDVANKIGII 489
VRLA DYDALDVANKIG I
Sbjct: 128 VRLASDYDALDVANKIGFI 146
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 103 VVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAA 279
V+ G HG R I+N++ R P F P H P P+++ +D + + +T+E
Sbjct: 437 VLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRP----PRKDEVDGKHY--YFVTNEQM 490
Query: 280 MKKIEDNNTLVFIVH 324
M I++N L + H
Sbjct: 491 MADIQNNEYLEYGTH 505
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical
protein F17E5.1a protein.
Length = 961
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 103 VVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAA 279
V+ G HG R I+N++ R P F P H P P+++ +D + + +T+E
Sbjct: 778 VLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRP----PRKDEVDGKHY--YFVTNEQM 831
Query: 280 MKKIEDNNTLVFIVH 324
M I++N L + H
Sbjct: 832 MADIQNNEYLEYGTH 846
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 103 VVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAA 279
V+ G HG R I+N++ R P F P H P P+++ +D + + +T+E
Sbjct: 437 VLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRP----PRKDEVDGKHY--YFVTNEQM 490
Query: 280 MKKIEDNNTLVFIVH 324
M I++N L + H
Sbjct: 491 MADIQNNEYLEYGTH 505
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 103 VVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAA 279
V+ G HG R I+N++ R P F P H P P+++ +D + + +T+E
Sbjct: 778 VLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRP----PRKDEVDGKHY--YFVTNEQM 831
Query: 280 MKKIEDNNTLVFIVH 324
M I++N L + H
Sbjct: 832 MADIQNNEYLEYGTH 846
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 132 YSLPMFTFYNLPLSLKCFSNRFHYFFLSLKILRI 31
+S + FYNL L KCFS FH+ F L++ I
Sbjct: 3293 FSKKVTFFYNL-LQSKCFSKHFHWLFEWLEVYLI 3325
>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
protein T14E8.1c protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 489 YDANFVGNVQCVI-ISSESYVRFLLTIRPDESVDFSNIYI 373
YD + Q + I+ ++YV+ ++RPD VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735
>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
protein T14E8.1b protein.
Length = 1030
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 489 YDANFVGNVQCVI-ISSESYVRFLLTIRPDESVDFSNIYI 373
YD + Q + I+ ++YV+ ++RPD VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735
>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
protein T14E8.1a protein.
Length = 1086
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 489 YDANFVGNVQCVI-ISSESYVRFLLTIRPDESVDFSNIYI 373
YD + Q + I+ ++YV+ ++RPD VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735
>AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical
protein Y40C7B.5 protein.
Length = 610
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/81 (23%), Positives = 38/81 (46%)
Frame = +1
Query: 61 VVKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 240
V KP+ ++ K ++ + E K V + N ++ EPP+ P + SL K+ +
Sbjct: 48 VFKPILESNKKLQEEIIDEKHKIVETLNNFKPSPLQRSIEPPKTPSINKPSLIKKPSVIL 107
Query: 241 YNIIKFPLTSEAAMKKIEDNN 303
N + + S + ++DN+
Sbjct: 108 PNPPQNLVVSNLIVSYLQDNS 128
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 29.1 bits (62), Expect = 4.4
Identities = 30/118 (25%), Positives = 47/118 (39%)
Frame = +1
Query: 157 FRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 336
F P E RHP R+ P+R + +K LT A+ + V +AN
Sbjct: 190 FAHPPDLE--RHPLSKRRGRPRRPQEQLETNVKLKLTRPASKAQRAPPTEPVAARTATAN 247
Query: 337 KHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII*TVPYFL 510
+ HIK ++L D + +G +R R D L ++I +I +FL
Sbjct: 248 QRHIKLFEEEL-DTTPGGESYATVVNGCLTELLRKERIIDLLTNPDEIELIKQAGWFL 304
>U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical
protein C06E7.4 protein.
Length = 500
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 61 VVKPVTKALKAQRKVVKGEHGKRVRKI-RNSVHFRRPKTFEPPRHPKYPR 207
++ P K LK K+ K +H K ++K+ + + P PP HP Y R
Sbjct: 108 LIPPDAKTLKKLEKMEK-KHQKLMKKLGARGIPIQMPVPPPPPMHPMYSR 156
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/67 (31%), Positives = 26/67 (38%)
Frame = -2
Query: 802 PHLPLNLKHKMKAIVVVNLFIAAYNGYX*SXSITNFTNKAFFSLHXSCGLSKLINVSYHV 623
P P + K+K IV +N F N Y S NF + F L G K I
Sbjct: 287 PRSPSSFDEKLKYIVGINNFNMIQNFYSHPCSFKNFAQEKDFLL--GIGYLKKIIPDEDA 344
Query: 622 WIQLTLN 602
WI +N
Sbjct: 345 WIYWNIN 351
>AC024797-3|AAF60706.1| 112|Caenorhabditis elegans Hypothetical
protein Y48G8AR.3 protein.
Length = 112
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 151 VHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAM 282
+ FRR + RH R+++P ++ I KFP SE A+
Sbjct: 1 MEFRRKCSRSAMRHKSQKRRAMPNQDVEKVNEIFKFPRISEQAL 44
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 205 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 369
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 205 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 369
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 79 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 131
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 205 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 369
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 647 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 699
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 205 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 369
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>AL117193-11|CAB55000.1| 174|Caenorhabditis elegans Hypothetical
protein Y105C5A.22 protein.
Length = 174
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 13 YRYTIGNP*DFKGQKKVVKPVTKALKAQRKVVKGEHGKRVRKI-RNSVHFRRPK-TFEPP 186
+R T G G + V + A+ +RK E K++RKI RN H R+ T
Sbjct: 92 HRDTFGKAAPNFGSRIVSLRLCSAVFGRRK----ERRKKMRKIGRNFSHDRQQSSTSLSA 147
Query: 187 RHPKYPRKSLPKRNRMD 237
+ P Y R+S P+RN D
Sbjct: 148 QPPVYRRRSEPRRNDCD 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,591,594
Number of Sequences: 27780
Number of extensions: 301126
Number of successful extensions: 942
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -