Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_B08
         (892 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -1

Query: 583 GGGPXGGXGPPXXPXXXXXFXPPGXPXG 500
           GG P G  GPP  P       P G P G
Sbjct: 288 GGMPSGMVGPPRPPMPMQGGAPGGPPQG 315



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/40 (32%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
 Frame = +3

Query: 465 PPPPPXXXXXXXPXGXPGGKKXXXXXGXXGGP---XPPXG 575
           PP PP       P G P G +        G P    PP G
Sbjct: 297 PPRPPMPMQGGAPGGPPQGMRPNFYNRPMGDPQTSRPPSG 336


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 456 GXXPPPPPXXXXXXXPXGXP 515
           G  PPPPP       P G P
Sbjct: 781 GSPPPPPPPPPSSLSPGGVP 800


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 17/66 (25%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
 Frame = +3

Query: 366 GFXXPXGXXXKGGEKKXXXXXXXXXXXGXXGXXPPP-PPXXXXXXXPXGXPGGKKXXXXX 542
           G   P G     G++            G  G    P PP       P G PG K      
Sbjct: 113 GLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGYPGDVGPKGEPGPKGPAGHP 172

Query: 543 GXXGGP 560
           G  G P
Sbjct: 173 GAPGRP 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,389
Number of Sequences: 2352
Number of extensions: 10544
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)