Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_A15
         (1145 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146791-1|AAI46792.1| 1858|Homo sapiens myosin XVI protein.           31   7.9  
AL390918-1|CAI15821.1| 1858|Homo sapiens protein ( Human DNA seq...    31   7.9  
AL353143-1|CAH73221.1| 1858|Homo sapiens protein ( Human DNA seq...    31   7.9  
AL161431-1|CAI15548.1| 1858|Homo sapiens protein ( Human DNA seq...    31   7.9  
AL157771-1|CAI16366.1| 1858|Homo sapiens protein ( Human DNA seq...    31   7.9  
AL136132-1|CAH70519.1| 1858|Homo sapiens protein ( Human DNA seq...    31   7.9  
AB020672-1|BAA74888.2| 1900|Homo sapiens KIAA0865 protein protein.     31   7.9  

>BC146791-1|AAI46792.1| 1858|Homo sapiens myosin XVI protein.
          Length = 1858

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +2

Query: 887  GPGXRXARVPPCVXTHXTXRXSPPSTXPXPXPXTXPP 997
            G G R A  P     + + R SPPST P P P   PP
Sbjct: 1548 GDGDRPAS-PGLALFNGSGRASPPSTPPPPPPPPGPP 1583


>AL390918-1|CAI15821.1| 1858|Homo sapiens protein ( Human DNA sequence
            from clone RP11-569E4 on chromosome 13 Contains  part of
            a novel gene (KIAA0865), possible ortholog of rat myosin 
            ).
          Length = 1858

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +2

Query: 887  GPGXRXARVPPCVXTHXTXRXSPPSTXPXPXPXTXPP 997
            G G R A  P     + + R SPPST P P P   PP
Sbjct: 1548 GDGDRPAS-PGLALFNGSGRASPPSTPPPPPPPPGPP 1583


>AL353143-1|CAH73221.1| 1858|Homo sapiens protein ( Human DNA sequence
            from clone RP11-383F12 on chromosome 13 Contains part of
            a novel gene (including KIAA0865), possible ortholog of
            rat asin A2 ).
          Length = 1858

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +2

Query: 887  GPGXRXARVPPCVXTHXTXRXSPPSTXPXPXPXTXPP 997
            G G R A  P     + + R SPPST P P P   PP
Sbjct: 1548 GDGDRPAS-PGLALFNGSGRASPPSTPPPPPPPPGPP 1583


>AL161431-1|CAI15548.1| 1858|Homo sapiens protein ( Human DNA sequence
            from clone RP11-54H7 on chromosome 13 Contains  the 3'
            end a novel gene (including KIAA0865) possible ortholog
            of  ).
          Length = 1858

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +2

Query: 887  GPGXRXARVPPCVXTHXTXRXSPPSTXPXPXPXTXPP 997
            G G R A  P     + + R SPPST P P P   PP
Sbjct: 1548 GDGDRPAS-PGLALFNGSGRASPPSTPPPPPPPPGPP 1583


>AL157771-1|CAI16366.1| 1858|Homo sapiens protein ( Human DNA sequence
            from clone RP11-67J18 on chromosome 13 Contains  the 5'
            end of a novel gene (including KIAA0865), possible
            ortholog  ).
          Length = 1858

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +2

Query: 887  GPGXRXARVPPCVXTHXTXRXSPPSTXPXPXPXTXPP 997
            G G R A  P     + + R SPPST P P P   PP
Sbjct: 1548 GDGDRPAS-PGLALFNGSGRASPPSTPPPPPPPPGPP 1583


>AL136132-1|CAH70519.1| 1858|Homo sapiens protein ( Human DNA sequence
            from clone RP11-141M24 on chromosome 13q33.1-34  Contains
            part of a novel gene, possible ortholog of rat myosin
            heavy ).
          Length = 1858

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +2

Query: 887  GPGXRXARVPPCVXTHXTXRXSPPSTXPXPXPXTXPP 997
            G G R A  P     + + R SPPST P P P   PP
Sbjct: 1548 GDGDRPAS-PGLALFNGSGRASPPSTPPPPPPPPGPP 1583


>AB020672-1|BAA74888.2| 1900|Homo sapiens KIAA0865 protein protein.
          Length = 1900

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +2

Query: 887  GPGXRXARVPPCVXTHXTXRXSPPSTXPXPXPXTXPP 997
            G G R A  P     + + R SPPST P P P   PP
Sbjct: 1590 GDGDRPAS-PGLALFNGSGRASPPSTPPPPPPPPGPP 1625


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,046,896
Number of Sequences: 237096
Number of extensions: 1152696
Number of successful extensions: 2510
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2427
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 16032164540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)