Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_A09
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49911-4|CAA90127.1| 128|Caenorhabditis elegans Hypothetical pr... 205 4e-53
AL023844-2|CAA19527.1| 163|Caenorhabditis elegans Hypothetical ... 81 1e-15
AC006729-4|AAK84600.1| 265|Caenorhabditis elegans Ribosomal pro... 59 5e-09
AC006729-3|AAM15612.1| 245|Caenorhabditis elegans Ribosomal pro... 59 5e-09
U00067-8|AAK20077.1| 140|Caenorhabditis elegans Ribosomal prote... 39 0.004
Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 29 5.5
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 29 5.5
>Z49911-4|CAA90127.1| 128|Caenorhabditis elegans Hypothetical
protein M28.5 protein.
Length = 128
Score = 205 bits (500), Expect = 4e-53
Identities = 93/123 (75%), Positives = 114/123 (92%)
Frame = +1
Query: 262 VNPKAYPLADAALTAKILNLVQQATNYKQLRKGANEATKTLNRGLSELIIMAADAEPLEI 441
VNPKA+PLAD L+ K+++LVQQA NYKQL+KGANEATKTLNRG+SE+I+MAADAEPLEI
Sbjct: 6 VNPKAFPLADTNLSQKLMDLVQQAMNYKQLKKGANEATKTLNRGISEIIVMAADAEPLEI 65
Query: 442 VLHIPILCEDKNVPYVFVRSKQALGRACGVSRPIISCSITINEGSQLKPQIQTIQQEIER 621
+LH+P+LCEDKNVPYVFVRSK ALGRACGV+RP+I+ SIT NEGSQLK QIQ I++++E+
Sbjct: 66 LLHLPLLCEDKNVPYVFVRSKAALGRACGVTRPVIAASITQNEGSQLKSQIQKIKEDVEK 125
Query: 622 LLV 630
LL+
Sbjct: 126 LLI 128
>AL023844-2|CAA19527.1| 163|Caenorhabditis elegans Hypothetical
protein Y48A6B.3 protein.
Length = 163
Score = 81.0 bits (191), Expect = 1e-15
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 262 VNPKAYPLADAALTAKILNLVQQAT-NYKQLRKGANEATKTLNRGLSELIIMAADAEPLE 438
VNP A PLA+ L K+ L+++A+ K LR+G + K L R + I+A + P++
Sbjct: 39 VNPIAQPLANRKLAKKVYKLIKKASAGDKTLREGIKDVQKELRRNEKGICILAGNVSPID 98
Query: 439 IVLHIPILCEDKNVPYVFVRSKQALGRACGVSRPIISCSITINEGSQLKPQIQTIQQEIE 618
+ HIP +CE+K +PYV++ S++ LG A G RP S I + K + + +
Sbjct: 99 VYSHIPGICEEKEIPYVYIPSREQLGLAVGHRRP--SILIFVKPSGDFKELYDEVAEALR 156
Query: 619 RLLV 630
L V
Sbjct: 157 HLTV 160
>AC006729-4|AAK84600.1| 265|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7A, isoform a protein.
Length = 265
Score = 58.8 bits (136), Expect = 5e-09
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +1
Query: 349 LRKGANEATKTLNRGLSELIIMAADAEPLEIVLHIPILCEDKNVPYVFVRSKQALG 516
+R G N T+ + ++L+++A D PLEIVLH+P LC NVPY ++ K +LG
Sbjct: 137 VRHGVNTITRLVETRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLG 192
>AC006729-3|AAM15612.1| 245|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7A, isoform c protein.
Length = 245
Score = 58.8 bits (136), Expect = 5e-09
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +1
Query: 349 LRKGANEATKTLNRGLSELIIMAADAEPLEIVLHIPILCEDKNVPYVFVRSKQALG 516
+R G N T+ + ++L+++A D PLEIVLH+P LC NVPY ++ K +LG
Sbjct: 117 VRHGVNTITRLVETRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLG 172
>U00067-8|AAK20077.1| 140|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 12 protein.
Length = 140
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 313 LNLVQQATNYKQ-LRKGANEATKTLNRGLSELIIMAADAEPLEIVLHIPILCEDKNVPYV 489
L V +A ++ L KG +E K L++ + ++A + + + V + LC + +P +
Sbjct: 26 LRAVLRAAHHADGLAKGLHETCKALDKREAHFCVLAENCDEPQYVKLVETLCAEHQIPLI 85
Query: 490 FVRSKQALGRACGVSR 537
V K+ +G CG+ +
Sbjct: 86 KVADKKIIGEYCGLCK 101
>Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical
protein F36A2.1b protein.
Length = 656
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 208 VLLIQHRGIVNMAETEAAVNPKAYPLADAALTAKILNLVQQATNYKQLRKGANEATKTLN 387
+ + + R + + A T A N Y D AL +LV++ TN+ R + K +N
Sbjct: 111 IQIFKSRNVFSPASTTAMENLLGYEAEDQALEVDSDDLVKKITNFISARNVVADMMKCVN 170
Query: 388 RG 393
G
Sbjct: 171 EG 172
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 313 LNLVQQATNYKQLRKGANEATKTLNRGLSELIIMAADAEPLEIVLHIPILC 465
++ V TNY G + + T N GLS+L +M PLE +L I C
Sbjct: 4552 IDSVATITNYATGHNGTSSSLFTPN-GLSQLEVMQRATNPLEKILEIQTHC 4601
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 66 NNSIRIVNNIYTQNICDLSVELWQIPKFSLPYVKIISSVKREIAER 203
N ++ + Y I DL EL +I ++K+I+ +RE+ E+
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKIEALDKEHLKVIAKSQRELQEK 710
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 66 NNSIRIVNNIYTQNICDLSVELWQIPKFSLPYVKIISSVKREIAER 203
N ++ + Y I DL EL +I ++K+I+ +RE+ E+
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKIEALDKEHLKVIAKSQRELQEK 710
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 66 NNSIRIVNNIYTQNICDLSVELWQIPKFSLPYVKIISSVKREIAER 203
N ++ + Y I DL EL +I ++K+I+ +RE+ E+
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKIEALDKEHLKVIAKSQRELQEK 710
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 66 NNSIRIVNNIYTQNICDLSVELWQIPKFSLPYVKIISSVKREIAER 203
N ++ + Y I DL EL +I ++K+I+ +RE+ E+
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKIEALDKEHLKVIAKSQRELQEK 710
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 578 CEPSLMVIEQDMMGLETPQARPSACLDLTNTYGTFLSSHRIG 453
C P +V+ L T P C+DL T G L++++IG
Sbjct: 1165 CPPGYVVVYIPNSPLITNGVNPGTCIDLQCTTGLCLTANQIG 1206
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 578 CEPSLMVIEQDMMGLETPQARPSACLDLTNTYGTFLSSHRIG 453
C P +V+ L T P C+DL T G L++++IG
Sbjct: 507 CPPGYVVVYIPNSPLITNGVNPGTCIDLQCTTGLCLTANQIG 548
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 578 CEPSLMVIEQDMMGLETPQARPSACLDLTNTYGTFLSSHRIG 453
C P +V+ L T P C+DL T G L++++IG
Sbjct: 507 CPPGYVVVYIPNSPLITNGVNPGTCIDLQCTTGLCLTANQIG 548
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 66 NNSIRIVNNIYTQNICDLSVELWQIPKFSLPYVKIISSVKREIAER 203
N ++ + Y I DL EL +I ++K+I+ +RE+ E+
Sbjct: 669 NEQMKAIKQEYELKITDLRKELKKIEALDKEHLKVIAKSQRELQEK 714
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,900,036
Number of Sequences: 27780
Number of extensions: 310867
Number of successful extensions: 725
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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