Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_A02
         (878 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          32   3.2  
EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform ...    32   3.2  
EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform ...    32   3.2  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                32   3.2  
AF525413-1|AAP80791.1|  962|Homo sapiens cardiac titin N2BA isof...    32   3.2  
S63912-1|AAB27595.1|  269|Homo sapiens FBRNP protein.                  31   5.5  
AB018268-1|BAA34445.1|  573|Homo sapiens KIAA0725 protein protein.     31   5.5  
AJ405700-1|CAC03813.1|   64|Homo sapiens T-cell receptor beta ch...    31   7.3  

>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 668  PIPKSVMEGPINLPDVPKKPV 730
            P+PK V   P  +P+VPKKPV
Sbjct: 6685 PVPKKVEAPPAKVPEVPKKPV 6705


>EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform
           PEVK variant 4 protein.
          Length = 234

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 668 PIPKSVMEGPINLPDVPKKPV 730
           P+PK V   P  +P+VPKKPV
Sbjct: 61  PVPKKVEAPPAKVPEVPKKPV 81


>EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform
           PEVK variant 3 protein.
          Length = 391

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 668 PIPKSVMEGPINLPDVPKKPV 730
           P+PK V   P  +P+VPKKPV
Sbjct: 61  PVPKKVEAPPAKVPEVPKKPV 81


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 668   PIPKSVMEGPINLPDVPKKPV 730
             P+PK V   P  +P+VPKKPV
Sbjct: 10947 PVPKKVEAPPAKVPEVPKKPV 10967


>AF525413-1|AAP80791.1|  962|Homo sapiens cardiac titin N2BA isoform
           protein.
          Length = 962

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 668 PIPKSVMEGPINLPDVPKKPV 730
           P+PK V   P  +P+VPKKPV
Sbjct: 688 PVPKKVEAPPAKVPEVPKKPV 708


>S63912-1|AAB27595.1|  269|Homo sapiens FBRNP protein.
          Length = 269

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 176 ESFFTPNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMND-IAALREDLVKL 352
           E    P A + +K   V  I+ED  E+N  D +E  YG +     M D  +  +     +
Sbjct: 114 EDSVKPGAHLTVKKIFVGSIKEDTEEYNLRDYFEK-YGKIETIEVMEDRQSGKKRGFASV 172

Query: 353 EFSDHDDV 376
            F DHD V
Sbjct: 173 TFDDHDTV 180


>AB018268-1|BAA34445.1|  573|Homo sapiens KIAA0725 protein protein.
          Length = 573

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +2

Query: 251 EHNNLDSYENDYGSMRKSLSMNDIAALREDLVKLEFSDHDDVYQR 385
           + ++L   +++ GS+   +   D   L EDL KL+ S+  D++++
Sbjct: 226 QKDSLGDIDSEKGSLNIVMDQGDTPTLEEDLKKLQLSEFFDIFEK 270


>AJ405700-1|CAC03813.1|   64|Homo sapiens T-cell receptor beta chain
           protein.
          Length = 64

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 113 FYFVYF-ETQKMAKNYVTNFRGESFFTPNAKMNI 211
           F F YF ETQ+   N+   F G  FF   ++MN+
Sbjct: 4   FLFEYFSETQRNKGNFPGRFSGRQFFNSRSEMNV 37


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,640,769
Number of Sequences: 237096
Number of extensions: 2373840
Number of successful extensions: 8754
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8754
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)